PDB: 184427 件ウェブページステータス検索Chemie searchBIRD

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5KUB	Bacillus cereus DNA glycosylase AlkD bound to 7-methylguanine nucleobase and DNA containing an oxocarbenium-intermediate analog 分子名称: 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one, DNA (5'-D(*CP*CP*CP*GP*AP*(NRI)P*AP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*AP*CP*TP*CP*TP*CP*GP*GP*G)-3'), ... 著者 Mullins, E.A, Eichman, B.F. 登録日 2016-07-13 公開日 2016-09-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 A Catalytic Role for C-H/ pi Interactions in Base Excision Repair by Bacillus cereus DNA Glycosylase AlkD. J.Am.Chem.Soc., 138, 2016
1OG1	CRYSTAL STRUCTURE OF THE EUCARYOTIC MONO-ADP-RIBOSYLTRANSFERASE ART2.2 IN COMPLEX WITH TAD 分子名称: BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE, T-CELL ECTO-ADP-RIBOSYLTRANSFERASE 2 著者 Ritter, H, Koch-Nolte, F, Marquez, V.E, Schulz, G.E. 登録日 2003-04-23 公開日 2003-08-28 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Substrate Binding and Catalysis of Ecto-Adp-Ribosyltransferase 2.2 From Rat Biochemistry, 42, 2003
1U3R	Crystal Structure of Estrogen Receptor beta complexed with WAY-338 分子名称: 2-(5-HYDROXY-NAPHTHALEN-1-YL)-1,3-BENZOOXAZOL-6-OL, Estrogen receptor beta, steroid receptor coactivator-1 著者 Malamas, M.S, Manas, E.S, McDevitt, R.E, Gunawan, I, Xu, Z.B, Collini, M.D, Miller, C.P, Dinh, T, Henderson, R.A, Keith Jr, J.C, Harris, H.A. 登録日 2004-07-22 公開日 2005-07-26 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Design and synthesis of aryl diphenolic azoles as potent and selective estrogen receptor-beta ligands. J.Med.Chem., 47, 2004
6AQR	SAGA DUB module Ubp8(C146A)/Sgf11/Sus1/Sgf73 bound to monoubiquitin 分子名称: Polyubiquitin-C, SAGA-associated factor 11, SAGA-associated factor 73, ... 著者 Morrow, M.E, Morgan, M.T, Wolberger, C. 登録日 2017-08-21 公開日 2018-07-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Active site alanine mutations convert deubiquitinases into high-affinity ubiquitin-binding proteins. EMBO Rep., 19, 2018
6AS8	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside 分子名称: Fml fimbrial adhesin FmlD, ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside 著者 Kalas, V, Hultgren, S.J. 登録日 2017-08-23 公開日 2018-02-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
3IFS	2.0 Angstrom Resolution Crystal Structure of Glucose-6-phosphate Isomerase (pgi) from Bacillus anthracis. 分子名称: CHLORIDE ION, Glucose-6-phosphate isomerase, LITHIUM ION, ... 著者 Minasov, G, Wawrzak, Z, Onopriyenko, O, Gordon, E, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2009-07-24 公開日 2009-08-11 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (2.004 Å) 主引用文献 2.0 Angstrom Resolution Crystal Structure of Glucose-6-phosphate Isomerase (pgi) from Bacillus anthracis. To be Published
2DRM	Acanthamoeba myosin I SH3 domain bound to Acan125 分子名称: 18-mer peptide from Acan125, Acanthamoeba Myosin IB, GLYCEROL, ... 著者 Houdusse, A, Bahloul, A, Ostap, E.M. 登録日 2006-06-09 公開日 2007-05-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 The crystal structure of the SH3 domain of Acanthamoeba myosin IB bound to Acan125 To be Published
1U7T	Crystal Structure of ABAD/HSD10 with a Bound Inhibitor 分子名称: 1-AZEPAN-1-YL-2-PHENYL-2-(4-THIOXO-1,4-DIHYDRO-PYRAZOLO[3,4-D]PYRIMIDIN-5-YL)ETHANONE ADDUCT, 3-hydroxyacyl-CoA dehydrogenase type II, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Kissinger, C.R, Rejto, P.A, Pelletier, L.A, Showalter, R.E, Villafranca, J.E. 登録日 2004-08-04 公開日 2004-10-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of human ABAD/HSD10 with a bound inhibitor: implications for design of Alzheimer's disease therapeutics J.Mol.Biol., 342, 2004
5L11	Human Liver Receptor Homologue-1 (LRH-1) Bound to RJW100 and a Fragment of TIF-2 分子名称: (1R,3aR,6aR)-5-hexyl-4-phenyl-3a-(1-phenylethenyl)-1,2,3,3a,6,6a-hexahydropentalen-1-ol, Nuclear receptor subfamily 5 group A member 2, Tif2 著者 Mays, S.G, Ortlund, E.A. 登録日 2016-07-28 公開日 2016-10-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.849 Å) 主引用文献 Crystal Structures of the Nuclear Receptor, Liver Receptor Homolog 1, Bound to Synthetic Agonists. J. Biol. Chem., 291, 2016
1E0P	L intermediate of bacteriorhodopsin 分子名称: BACTERIORHODOPSIN, GROUND STATE, RETINAL 著者 Royant, A, Edman, K, Ursby, T, Pebay-Peyroula, E, Landau, E.M, Neutze, R. 登録日 2000-04-04 公開日 2000-08-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Helix Deformation is Coupled to Vectorial Proton Transport in Bacteriorhodopsin'S Photocycle Nature, 406, 2000
3M2R	Structural Insight into Methyl-Coenzyme M Reductase Chemistry using Coenzyme B Analogues 分子名称: 1,2-ETHANEDIOL, 1-THIOETHANESULFONIC ACID, Coenzyme B, ... 著者 Cedervall, P.E, Dey, M, Ragsdale, S.W, Wilmot, C.M. 登録日 2010-03-08 公開日 2010-09-15 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structural insight into methyl-coenzyme M reductase chemistry using coenzyme B analogues. Biochemistry, 49, 2010
5L4I	Crystal Structure of Human Transthyretin in Complex with Clonixin 分子名称: 2-(3-chloro-2-methylanilino)pyridine-3-carboxylic acid, SODIUM ION, Transthyretin 著者 Grundstrom, C, Hall, M, Zhang, J, Olofsson, A, Andersson, P, Sauer-Eriksson, A.E. 登録日 2016-05-25 公開日 2016-10-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structure-Based Virtual Screening Protocol for in Silico Identification of Potential Thyroid Disrupting Chemicals Targeting Transthyretin. Environ. Sci. Technol., 50, 2016
4MK4	S197C variant of human ferrochelatase. 分子名称: CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, Ferrochelatase, ... 著者 Lanzilotta, W.N, Medlock, A.E, Dailey, T.E, Dailey, H.A. 登録日 2013-09-04 公開日 2013-09-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 S197C variant of human ferrochelatase. To be Published
6AWD	Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
4I8V	Human Cytochrome P450 1A1 in complex with alpha-naphthoflavone 分子名称: 2-PHENYL-4H-BENZO[H]CHROMEN-4-ONE, Cytochrome P450 1A1, NITRATE ION, ... 著者 Walsh, A.A, Scott, E.E. 登録日 2012-12-04 公開日 2013-02-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Human Cytochrome P450 1A1 Structure and Utility in Understanding Drug and Xenobiotic Metabolism. J.Biol.Chem., 288, 2013
4I9Q	Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), ... 著者 Guja, K.E, Jacewicz, A, Trzemecka, A, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M. 登録日 2012-12-05 公開日 2013-10-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site. Plos One, 8, 2013
4DTD	Structure and functional characterization of a Vibrio cholerae toxin from the MARTX/VgrG family. 分子名称: GLYCEROL, VgrG protein 著者 Durand, E, Audoly, G, Derrez, E, Spinelli, S, Ortiz-Lombardia, M, Cascales, E, Raoult, D, Cambillau, C. 登録日 2012-02-21 公開日 2012-08-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure and functional characterization of a Vibrio cholerae toxin from the MARTX/VgrG family. J.Biol.Chem., 2012
7F9Y	ghrelin-bound ghrelin receptor in complex with Gq 分子名称: CHOLESTEROL, Engineered G-alpha-q subunit, Ghrelin-28, ... 著者 Wang, Y, Zhuang, Y, Xu, P, Xu, H.E, Jiang, Y. 登録日 2021-07-05 公開日 2021-08-18 最終更新日 2022-03-16 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Molecular recognition of an acyl-peptide hormone and activation of ghrelin receptor. Nat Commun, 12, 2021
7F9Z	GHRP-6-bound ghrelin receptor in complex with Gq 分子名称: 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, Engineered G-alpha-q, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... 著者 Wang, Y, Zhuang, Y, Xu, P, Xu, H.E, Jiang, Y. 登録日 2021-07-05 公開日 2021-08-18 最終更新日 2022-03-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Molecular recognition of an acyl-peptide hormone and activation of ghrelin receptor. Nat Commun, 12, 2021
5L7R	Crystal structure of BvGH123 分子名称: 1,2-ETHANEDIOL, glycoside hydrolase 著者 Roth, C, Petricevic, M, John, A, Goddard-Borger, E.D, Davies, G.J, Williams, S.J. 登録日 2016-06-03 公開日 2017-03-22 最終更新日 2017-08-30 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural and mechanistic insights into a Bacteroides vulgatus retaining N-acetyl-beta-galactosaminidase that uses neighbouring group participation. Chem. Commun. (Camb.), 52, 2016
4HQC	Crystal structure of a green-to-red photoconvertible DRONPA, pcDRONPA in the red-on-state 分子名称: DI(HYDROXYETHYL)ETHER, Fluorescent protein Dronpa, TETRAETHYLENE GLYCOL, ... 著者 Nguyen Bich, N, Van Meervelt, L. 登録日 2012-10-25 公開日 2013-11-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Green-to-red photoconvertible Dronpa mutant for multimodal super-resolution fluorescence microscopy ACS Nano, 8, 2014
7F16	Cryo-EM structure of parathyroid hormone receptor type 2 in complex with a tuberoinfundibular peptide of 39 residues and G protein 分子名称: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Wang, X, Cheng, X, Zhao, L.H, Wang, Y, Ye, C, Zou, X, Dai, A, Cong, Z, Chen, J, Zhou, Q, Xia, T, Jiang, H, Xu, H.E, Yang, D, Wang, M.W. 登録日 2021-06-08 公開日 2021-08-18 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Molecular insights into differentiated ligand recognition of the human parathyroid hormone receptor 2. Proc.Natl.Acad.Sci.USA, 118, 2021
7EZK	Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gs complex 分子名称: Chimera of Guanine nucleotide-binding protein G(i) subunit alpha-1 and Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, Cholecystokinin receptor type A, Cholecystokinin-8, ... 著者 Liu, Q.F, Yang, D.H, Zhuang, Y.W, Croll, T.I, Cai, X.Q, Duan, J, Dai, A.T, Yin, W.C, Ye, C.Y, Zhou, F.L, Wu, B.L, Zhao, Q, Xu, H.E, Wang, M.W, Jiang, Y. 登録日 2021-06-01 公開日 2021-08-25 最終更新日 2022-06-29 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Ligand recognition and G-protein coupling selectivity of cholecystokinin A receptor Nat.Chem.Biol., 17, 2021
5LBG	Crystal structure of the Mycobacterium tuberculosis L,D-transpeptidase-2 (LdtMt2) BC-module with faropenem-derived adduct at the active site cysteine-354 分子名称: (3S)-3-HYDROXYBUTANOIC ACID, L,D-transpeptidase 2 著者 Steiner, E.M, Schnell, R, Schneider, G. 登録日 2016-06-16 公開日 2017-01-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Binding and processing of beta-lactam antibiotics by the transpeptidase LdtMt2 from Mycobacterium tuberculosis. FEBS J., 284, 2017
5TIR	Crystal Structure of Mn Superoxide Dismutase mutant M27V from Trichoderma reesei 分子名称: MANGANESE (II) ION, Superoxide dismutase 著者 Mendoza, E.R, Brandao-Neto, J, Pereira, H.M, Ferreira Junior, J.R.S, Garratt, R.C. 登録日 2016-10-03 公開日 2017-10-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Crystal Structure of Mn Superoxide Dismutase mutant M27V from Trichoderma reesei To Be Published

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