PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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3INM	Crystal structure of human cytosolic NADP(+)-dependent isocitrate dehydrogenase R132H mutant in complex with NADPH, ALPHA-KETOGLUTARATE and CALCIUM(2+) 分子名称: 2-OXOGLUTARIC ACID, CALCIUM ION, GLYCEROL, ... 著者 Fontano, E, Brown, R.S, Suto, R.K, Bhyravbhatla, B. 登録日 2009-08-12 公開日 2009-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Cancer-associated IDH1 mutations produce 2-hydroxyglutarate. Nature, 462, 2009
3QZ7	T-3 ternary complex of Dpo4 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*G)-3', 5'-D(*TP*TP*AP*CP*GP*CP*CP*TP*CP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ... 著者 Pata, J.D, Wu, Y, Wilson, R.C. 登録日 2011-03-04 公開日 2011-04-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.998 Å) 主引用文献 The y-family DNA polymerase dpo4 uses a template slippage mechanism to create single-base deletions. J.Bacteriol., 193, 2011
4XW5	X-ray structure of PKAc with ATP, CP20, calcium ions 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ... 著者 Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A. 登録日 2015-01-28 公開日 2015-05-06 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT. J.Biol.Chem., 290, 2015
3QZ8	TT-4 ternary complex of Dpo4 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*GP*G)-3', 5'-D(*TP*TP*AP*CP*GP*CP*CP*TP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ... 著者 Pata, J.D, Wu, Y, Wilson, R.C. 登録日 2011-03-04 公開日 2011-04-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.999 Å) 主引用文献 The y-family DNA polymerase dpo4 uses a template slippage mechanism to create single-base deletions. J.Bacteriol., 193, 2011
2XAD	Crystal structure of deacetylase-teicoplanin complex in biosynthesis pathway of teicoplanin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, 8-METHYLNONANOIC ACID, ... 著者 Chan, H.C, Huang, Y.T, Lyu, S.Y, Huang, C.J, Li, Y.S, Liu, Y.C, Chou, C.C, Tsai, M.D, Li, T.L. 登録日 2010-03-31 公開日 2011-03-02 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Regioselective Deacetylation Based on Teicoplanin-Complexed Orf2 Crystal Structures. Mol.Biosyst., 7, 2011
6A6M	Crystal structure of an outward-open nucleotide-bound state of the eukaryotic ABC multidrug transporter CmABCB1 分子名称: ATP-binding cassette, sub-family B, member 1, ... 著者 Kato, H, Nakatsu, T, Kodan, A. 登録日 2018-06-28 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Inward- and outward-facing X-ray crystal structures of homodimeric P-glycoprotein CmABCB1. Nat Commun, 10, 2019
1TZI	Crystal Structure of the Fab YADS2 Complexed with h-VEGF 分子名称: Fab YADS2 Heavy Chain, Fab YADS2 Light Chain, Vascular endothelial growth factor A 著者 Fellouse, F.A, Wiesmann, C, Sidhu, S.S. 登録日 2004-07-10 公開日 2004-08-31 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Synthetic antibodies from a four-amino-acid code: A dominant role for tyrosine in antigen recognition Proc.Natl.Acad.Sci.USA, 101, 2004
1AFX	UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES 分子名称: RNA (5'-R(*GP*GP*UP*GP*UP*GP*AP*AP*CP*AP*CP*C)-3') 著者 Butcher, S.E, Dieckmann, T, Feigon, J. 登録日 1997-03-15 公開日 1997-05-15 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the loop B domain from the hairpin ribozyme. Nat.Struct.Biol., 6, 1999
1F60	CRYSTAL STRUCTURE OF THE YEAST ELONGATION FACTOR COMPLEX EEF1A:EEF1BA 分子名称: ELONGATION FACTOR EEF1A, ELONGATION FACTOR EEF1BA 著者 Andersen, G.R, Pedersen, L, Valente, L, Kinzy, T.G, Nyborg, J. 登録日 2000-06-19 公開日 2000-07-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Structural basis for nucleotide exchange and competition with tRNA in the yeast elongation factor complex eEF1A:eEF1Balpha. Mol.Cell, 6, 2000
2VHZ	Crystal structure of holo L-alanine dehydrogenase from Mycobacterium tuberculosis in the closed conformation 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ALANINE DEHYDROGENASE 著者 Agren, D, Schneider, G. 登録日 2007-11-26 公開日 2008-03-11 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol., 377, 2008
2VHW	Crystal structure of holo L-alanine dehydrogenase from Mycobacterium tuberculosis in the open and closed conformation 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ALANINE DEHYDROGENASE, MAGNESIUM ION 著者 Agren, D, Schneider, G. 登録日 2007-11-26 公開日 2008-03-11 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol., 377, 2008
1TTF	THE THREE-DIMENSIONAL STRUCTURE OF THE TENTH TYPE III MODULE OF FIBRONECTIN: AN INSIGHT INTO RGD-MEDIATED INTERACTIONS 分子名称: FIBRONECTIN 著者 Main, A.L, Harvey, T.S, Baron, M, Campbell, I.D. 登録日 1993-07-14 公開日 1994-01-31 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The three-dimensional structure of the tenth type III module of fibronectin: an insight into RGD-mediated interactions. Cell(Cambridge,Mass.), 71, 1992
1KQK	Solution Structure of the N-terminal Domain of a Potential Copper-translocating P-type ATPase from Bacillus subtilis in the Cu(I)loaded State 分子名称: COPPER (I) ION, POTENTIAL COPPER-TRANSPORTING ATPASE 著者 Banci, L, Bertini, I, Ciofi-Baffoni, S, D'Onofrio, M, Gonnelli, L, Marhuenda-Egea, F.C, Ruiz-Duenas, F.J. 登録日 2002-01-07 公開日 2002-04-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the N-terminal domain of a potential copper-translocating P-type ATPase from Bacillus subtilis in the apo and Cu(I) loaded states. J.Mol.Biol., 317, 2002
1TTG	THE THREE-DIMENSIONAL STRUCTURE OF THE TENTH TYPE III MODULE OF FIBRONECTIN: AN INSIGHT INTO RGD-MEDIATED INTERACTIONS 分子名称: FIBRONECTIN 著者 Main, A.L, Harvey, T.S, Baron, M, Campbell, I.D. 登録日 1993-07-14 公開日 1994-01-31 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The three-dimensional structure of the tenth type III module of fibronectin: an insight into RGD-mediated interactions. Cell(Cambridge,Mass.), 71, 1992
2VHY	Crystal structure of apo L-alanine dehydrogenase from Mycobacterium tuberculosis 分子名称: ALANINE DEHYDROGENASE 著者 Agren, D, Schneider, G. 登録日 2007-11-26 公開日 2008-03-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol., 377, 2008
6PUC	Structure of human MAIT A-F7 TCR in complex with human MR1-5-OP-RU 分子名称: 1-deoxy-1-({2,6-dioxo-5-[(E)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, CHLORIDE ION, ... 著者 Awad, W, Rossjohn, J. 登録日 2019-07-18 公開日 2020-02-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The molecular basis underpinning the potency and specificity of MAIT cell antigens. Nat.Immunol., 21, 2020
3IFD	Human synthetic monocyte chemoattractant protein 1 (MCP-1) 分子名称: C-C motif chemokine 2, PHOSPHATE ION, POTASSIUM ION 著者 Teplyakov, A, Obmolova, G, Gilliland, G.L. 登録日 2009-07-24 公開日 2009-08-04 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Synthesis by native chemical ligation and crystal structure of human CCL2. Biopolymers, 94, 2010
6PUS	Human TRPM2 bound to ADPR and calcium 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, CALCIUM ION, Transient receptor potential cation channel subfamily M member 2 著者 Du, J, Lu, W, Huang, Y. 登録日 2019-07-18 公開日 2019-09-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Ligand recognition and gating mechanism through three ligand-binding sites of human TRPM2 channel. Elife, 8, 2019
1L5V	Crystal Structure of the Maltodextrin Phosphorylase complexed with Glucose-1-phosphate 分子名称: 1-O-phosphono-alpha-D-glucopyranose, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MALTODEXTRIN PHOSPHORYLASE, ... 著者 Geremia, S, Campagnolo, M, Schinzel, R, Johnson, L.N. 登録日 2002-03-08 公開日 2002-04-10 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Enzymatic catalysis in crystals of Escherichia coli maltodextrin phosphorylase J.Mol.Biol., 322, 2002
2UY6	Crystal structure of the P pilus rod subunit PapA 分子名称: PAP FIMBRIAL MAJOR PILIN PROTEIN, PERIPLASMID CHAPERONE PAPD PROTEIN 著者 Verger, D, Bullitt, E, Hultgren, S.J, Waksman, G. 登録日 2007-04-02 公開日 2007-05-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of the P Pilus Rod Subunit Papa. Plos Pathog., 3, 2007
1QS2	CRYSTAL STRUCTURE OF VIP2 WITH NAD 分子名称: ADP-RIBOSYLTRANSFERASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Han, S, Craig, J.A, Putnam, C.D, Carozzi, N.B, Tainer, J.A. 登録日 1999-06-25 公開日 1999-12-29 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Evolution and mechanism from structures of an ADP-ribosylating toxin and NAD complex. Nat.Struct.Biol., 6, 1999
3O6L	Anti-Tat HIV 11H6H1 Fab' complexed with a 15-mer Tat peptide 分子名称: 11H6H1 Fab' heavy chain, 11H6H1 Fab' light chain, Protein Tat 15-mer peptide 著者 Serriere, J, Gouet, P, Guillon, C. 登録日 2010-07-29 公開日 2010-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Fab'-induced folding of antigenic N-terminal peptides from intrinsically disordered HIV-1 Tat revealed by X-ray crystallography. J.Mol.Biol., 405, 2011
1L8S	CARBOXYLIC ESTER HYDROLASE COMPLEX (DIMERIC PLA2 + LPC-ether + ACETATE + PHOSPHATE IONS) 分子名称: 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ACETATE ION, CALCIUM ION, ... 著者 Pan, Y.H, Bahnson, B.J. 登録日 2002-03-21 公開日 2002-12-25 最終更新日 2018-01-31 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal structure of phospholipase A2 Complex with the Hydrolysis Products of Platelet Activating Factor: Equilibrium Binding of Fatty Acid and Lysophospholipid-ether at the Active Site may be Mutually Exclusive Biochemistry, 41, 2002
6PUR	Human TRPM2 bound to ADPR 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Transient receptor potential cation channel subfamily M member 2 著者 Du, J, Lu, W, Huang, Y. 登録日 2019-07-18 公開日 2019-09-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Ligand recognition and gating mechanism through three ligand-binding sites of human TRPM2 channel. Elife, 8, 2019
6PVR	Influenza B M2 Proton Channel in the Closed State - SSNMR Structure at pH 7.5 分子名称: BM2 protein 著者 Mandala, V.S, Loftis, A.R, Shcherbakov, A.S, Pentelute, B.L, Hong, M. 登録日 2019-07-21 公開日 2020-02-05 最終更新日 2024-05-01 実験手法 SOLID-STATE NMR 主引用文献 Atomic structures of closed and open influenza B M2 proton channel reveal the conduction mechanism. Nat.Struct.Mol.Biol., 27, 2020

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