PDB: 243083 件ウェブページステータス検索Chemie searchBIRD

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8Y1M	Xylanase R from Bacillus sp. TAR-1 complexed with xylobiose. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ... 著者 Nakamura, T, Kuwata, K, Takita, T, Mizutani, K, Mikami, B, Nakamura, S, Yasukawa, K. 登録日 2024-01-25 公開日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Activity-stability trade-off observed in variants at position 315 of the GH10 xylanase XynR. Sci Rep, 14, 2024
6JOM	Crystal structure of lipoate protein ligase from Mycoplasma hyopneumoniae 分子名称: 5'-O-[(R)-({5-[(3R)-1,2-DITHIOLAN-3-YL]PENTANOYL}OXY)(HYDROXY)PHOSPHORYL]ADENOSINE, Lipoate--protein ligase 著者 Zhang, H, Chen, H, Ma, G. 登録日 2019-03-22 公開日 2020-03-25 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Functional Identification and Structural Analysis of a New Lipoate Protein Ligase inMycoplasma hyopneumoniae. Front Cell Infect Microbiol, 10, 2020
6V2F	Crystal structure of the HIV capsid hexamer bound to the small molecule long-acting inhibitor, GS-6207 分子名称: HIV-1 capsid, Lenacapavir 著者 Appleby, T.C, Link, J.O, Yant, S.R, Villasenor, A.G, Somoza, J.R, Hu, E.Y, Schroeder, S.D, Cihlar, T. 登録日 2019-11-22 公開日 2020-07-01 最終更新日 2024-12-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Clinical targeting of HIV capsid protein with a long-acting small molecule. Nature, 584, 2020
6V74	Crystal Structure of Human PKM2 in Complex with L-asparagine 分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, ASPARAGINE, CHLORIDE ION, ... 著者 Nandi, S, Dey, M. 登録日 2019-12-07 公開日 2020-03-18 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Biochemical and structural insights into how amino acids regulate pyruvate kinase muscle isoform 2. J.Biol.Chem., 295, 2020
6J5L	Crystal structure of Trk-A in complex with the Pan-Trk Kinase Inhibitor, compound 10e 分子名称: High affinity nerve growth factor receptor, N-{2-[({3-[6-(piperazin-1-yl)pyridin-3-yl]-1H-indazol-5-yl}amino)methyl]phenyl}methanesulfonamide 著者 Kensuke, A, Kazutaka, I. 登録日 2019-01-11 公開日 2019-07-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The discovery of novel 3-aryl-indazole derivatives as peripherally restricted pan-Trk inhibitors for the treatment of pain. Bioorg.Med.Chem.Lett., 29, 2019
4UCO	Fragment bound to H.influenza NAD dependent DNA ligase 分子名称: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 7-amino-2-tert-butyl-4-(1H-pyrrol-2-yl)pyrido[2,3-d]pyrimidine-6-carboxamide, DNA LIGASE 著者 Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A. 登録日 2014-12-04 公開日 2015-10-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors Tetrahedron Lett., 56, 2015
4UZG	Crystal structure of group B streptococcus pilus 2b backbone protein SAK_1440 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SURFACE PROTEIN SPB1 著者 Malito, E, Cozzi, R, Bottomley, M.J. 登録日 2014-09-05 公開日 2015-05-13 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.06 Å) 主引用文献 Structure and assembly of group B streptococcus pilus 2b backbone protein. PLoS ONE, 10, 2015
4US5	Crystal Structure of apo-MsnO8 分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Maier, S, Pflueger, T, Loesgen, S, Asmus, K, Broetz, E, Paululat, T, Zeeck, A, Andrade, S, Bechthold, A. 登録日 2014-07-03 公開日 2014-07-16 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Insights Into the Bioactivity of Mensacarcin and Epoxide Formation by Msno8. Chembiochem, 15, 2014
6V3C	K2P2.1(TREK-1)I110D:Ru360 bound channel structure 分子名称: CADMIUM ION, HEXANE, N-OCTANE, ... 著者 Pope, L, Lolicato, M, Minor, D.L. 登録日 2019-11-25 公開日 2020-02-26 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (3.51 Å) 主引用文献 Polynuclear Ruthenium Amines Inhibit K2PChannels via a "Finger in the Dam" Mechanism. Cell Chem Biol, 2020
7VKE	Crystal structure of human CD38 ECD in complex with UniDab(TM) F11A 分子名称: 1,2-ETHANEDIOL, ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, CHLORIDE ION, ... 著者 Schooten, W.V, Schellenberger, U, Ugamraj, H.S, Manicka, S, Bijpuria, S, Gondu, R.K. 登録日 2021-09-29 公開日 2022-08-03 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 TNB-738, a biparatopic antibody, boosts intracellular NAD+ by inhibiting CD38 ecto-enzyme activity. Mabs, 14, 2022
4WDY	JC Polyomavirus VP1 five-fold pore mutant N221Q 分子名称: 1,2-ETHANEDIOL, GLYCEROL, Major capsid protein VP1 著者 Stroh, L.J, Stehle, T. 登録日 2014-09-09 公開日 2015-02-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Modulation of a Pore in the Capsid of JC Polyomavirus Reduces Infectivity and Prevents Exposure of the Minor Capsid Proteins. J.Virol., 89, 2015
6JOI	Crystal structure of PDGFRA T674I in complex with crenolanib by co-crystallization 分子名称: 1-(2-{5-[(3-Methyloxetan-3-yl)methoxy]-1H-benzimidazol-1-yl}quinolin-8-yl)piperidin-4-amine, Platelet-derived growth factor receptor alpha 著者 Liang, L, Yan, X.E, Yun, C.H. 登録日 2019-03-22 公開日 2020-03-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structure of PDGFRA T674I in complex with crenolanib by co-crystallization To Be Published
8XVM	Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (3-up state) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ... 著者 Yajima, H, Anraku, Y, Kita, S, Kimura, K, Maenaka, K, Hashiguchi, T. 登録日 2024-01-15 公開日 2024-10-09 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (2.77 Å) 主引用文献 Structural basis for receptor-binding domain mobility of the spike in SARS-CoV-2 BA.2.86 and JN.1. Nat Commun, 15, 2024
8XV0	Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (up state) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ... 著者 Yajima, H, Anraku, Y, Kita, S, Kimura, K, Maenaka, K, Hashiguchi, T. 登録日 2024-01-14 公開日 2024-10-09 最終更新日 2024-11-27 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis for receptor-binding domain mobility of the spike in SARS-CoV-2 BA.2.86 and JN.1. Nat Commun, 15, 2024
8XV1	Structure of SARS-CoV-2 BA.2.86 spike RBD in complex with ACE2 (down state) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ... 著者 Yajima, H, Anraku, Y, Kita, S, Kimura, K, Maenaka, K, Hashiguchi, T. 登録日 2024-01-14 公開日 2024-10-09 最終更新日 2024-11-27 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 Structural basis for receptor-binding domain mobility of the spike in SARS-CoV-2 BA.2.86 and JN.1. Nat Commun, 15, 2024
8XNW	Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type II, Wild type mouse under Cold Acclimation 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XUY	Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (2-up state) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ... 著者 Yajima, H, Anraku, Y, Kita, S, Kimura, K, Maenaka, K, Hashiguchi, T. 登録日 2024-01-14 公開日 2024-10-09 最終更新日 2024-11-20 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 Structural basis for receptor-binding domain mobility of the spike in SARS-CoV-2 BA.2.86 and JN.1. Nat Commun, 15, 2024
8XNR	Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type IB, Wild type mouse under Cold Acclimation 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XNT	Respiratory complex Peripheral Arm of CI, close form C, focus-refined map of type IB, Wild type mouse under Cold Acclimation 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XO0	Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type I, PERK -/- mouse under Cold Acclimation 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XNX	Respiratory complex Peripheral Arm of CI, open form A, focus-refined map of type II, Wild type mouse under Cold Acclimation 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XNL	Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type I, Wild type mouse under thermoneutral temperature 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XNS	Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type IB, Wild type mouse under Cold Acclimation 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XNM	Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type I, Wild type mouse under thermoneutral temperature 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024
8XNZ	Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type I, PERK -/- mouse under Cold Acclimation 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Shin, Y.-C, Liao, M. 登録日 2023-12-30 公開日 2024-10-30 最終更新日 2024-12-04 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis of respiratory complex adaptation to cold temperatures. Cell, 187, 2024

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