8XVM

Structure of SARS-CoV-2 BA.2.86 spike glycoprotein in complex with ACE2 (3-up state)

This is a non-PDB format compatible entry.

Summary for 8XVM

• Entry DOI: 10.2210/pdb8xvm/pdb
• EMDB information: 38690
• Descriptor: Spike glycoprotein, Processed angiotensin-converting enzyme 2, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (6 entities in total)
• Functional Keywords: spike protein, glycoprotein, virus, viral protein, viral protein-protein binding complex, viral protein/protein binding
• Biological source: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV,SARS-CoV-2); More
• Total number of polymer chains: 2
• Total formula weight: 213480.73

Authors

Yajima, H.,Anraku, Y.,Kita, S.,Kimura, K.,Maenaka, K.,Hashiguchi, T. (deposition date: 2024-01-15, release date: 2024-10-09)

• Primary citation: Tamura, T.,Ito, J.,Uriu, K.,Zahradnik, J.,Kida, I.,Anraku, Y.,Nasser, H.,Shofa, M.,Oda, Y.,Lytras, S.,Nao, N.,Itakura, Y.,Deguchi, S.,Suzuki, R.,Wang, L.,Begum, M.M.,Kita, S.,Yajima, H.,Sasaki, J.,Sasaki-Tabata, K.,Shimizu, R.,Tsuda, M.,Kosugi, Y.,Fujita, S.,Pan, L.,Sauter, D.,Yoshimatsu, K.,Suzuki, S.,Asakura, H.,Nagashima, M.,Sadamasu, K.,Yoshimura, K.,Yamamoto, Y.,Nagamoto, T.,Schreiber, G.,Maenaka, K.,Hashiguchi, T.,Ikeda, T.,Fukuhara, T.,Saito, A.,Tanaka, S.,Matsuno, K.,Takayama, K.,Sato, K.; Structural basis for receptor-binding domain mobility of the spike in SARS-CoV-2 BA.2.86 and JN.1; Nat Commun, 2024; DOI: 10.1038/s41467-024-52808-2

Experimental method

ELECTRON MICROSCOPY (2.77 Å)