PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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3ZCJ	Crystal structure of Helicobacter pylori T4SS protein CagL in a tetragonal crystal form with a helical RGD-motif (6 Mol per ASU) 分子名称: CAGL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Barden, S, Niemann, H.H. 登録日 2012-11-20 公開日 2013-10-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 A Helical Rgd Motif Promoting Cell Adhesion: Crystal Structures of the Helicobacter Pylori Type Iv Secretion System Pilus Protein Cagl Structure, 21, 2013
5T71	Human carboanhydrase F131C_C206S double mutant in complex with SA-2 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(HYDROXYMERCURY)BENZOIC ACID, 4-[(E)-diazenyl]benzene-1-sulfonamide, ... 著者 DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J. 登録日 2016-09-02 公開日 2017-09-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity. ACS Chem. Biol., 13, 2018
4D8J	Structure of E. coli MatP-mats complex 分子名称: 5'-D(*TP*TP*CP*GP*TP*GP*AP*CP*AP*AP*TP*GP*TP*CP*AP*CP*GP*AP*A)-3', 5'-D(*TP*TP*CP*GP*TP*GP*AP*CP*AP*TP*TP*GP*TP*CP*AP*CP*GP*AP*A)-3', Macrodomain Ter protein 著者 Dupaigne, P, Tonthat, N.K, Espeli, O, Whitfill, T, Boccard, F, Schumacher, M.A. 登録日 2012-01-10 公開日 2012-11-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.55 Å) 主引用文献 Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome. Mol.Cell, 48, 2012
4NGH	Crystal structure of the HIV-1 neutralizing antibody 4E10 Fab fragment in complex with a hydrocarbon-stapled peptide containing the 4e10 epitope on gp41 and a tethered phosphate moiety. 分子名称: FAB HEAVY CHAIN, FAB LIGHT CHAIN, MODIFIED FRAGMENT OF HIV GLYCOPROTEIN (GP41) 著者 Irimia, A, Wilson, I.A. 登録日 2013-11-01 公開日 2014-12-03 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 Stapled HIV-1 peptides recapitulate antigenic structures and engage broadly neutralizing antibodies. Nat.Struct.Mol.Biol., 21, 2014
5T74	Human carboanhydrase F131C_C206S double mutant in complex with 14 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[2,5-bis(oxidanylidene)pyrrol-1-yl]-~{N}-(4-sulfamoylphenyl)ethanamide, 4-(HYDROXYMERCURY)BENZOIC ACID, ... 著者 DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J. 登録日 2016-09-02 公開日 2017-09-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity. ACS Chem. Biol., 13, 2018
4CPG	Solution structure of the SGTA N-terminal domain 分子名称: SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ALPHA 著者 Darby, J.F, Krysztofinska, E.M, Simpson, P.J, Isaacson, R.L. 登録日 2014-02-06 公開日 2014-12-03 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the Sgta Dimerisation Domain and Investigation of its Interactions with the Ubiquitin-Like Domains of Bag6 and Ubl4A. Plos One, 9, 2014
3FWV	Crystal Structure of a Redesigned TPR Protein, T-MOD(VMY), in Complex with MEEVF Peptide 分子名称: Heat shock protein HSP 90-beta, Hsc70/Hsp90-organizing protein, NICKEL (II) ION 著者 Jackrel, M.E, Valverde, R, Regan, L. 登録日 2009-01-19 公開日 2009-04-21 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Redesign of a protein-peptide interaction: characterization and applications Protein Sci., 18, 2009
1O0M	Ribonuclease A in complex with uridine-2'-phosphate 分子名称: PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER, Ribonuclease pancreatic 著者 Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M. 登録日 2003-02-24 公開日 2003-12-09 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors PROTEIN SCI., 12, 2003
1FU7	STRUCTURES OF GLYCOGEN PHOSPHORYLASE-INHIBITOR COMPLEXES AND THE IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN 分子名称: GLYCOGEN PHOSPHORYLASE, N-(methoxycarbonyl)-beta-D-glucopyranosylamine, PYRIDOXAL-5'-PHOSPHATE 著者 Watson, K.A, Tsitsanou, K.E, Gregoriou, M, Zographos, S.E, Skamnaki, V.T, Oikonomakos, N.G, Fleet, G.W, Johnson, L.N. 登録日 2000-09-14 公開日 2000-10-04 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Kinetic and crystallographic studies of glucopyranose spirohydantoin and glucopyranosylamine analogs inhibitors of glycogen phosphorylase. Proteins, 61, 2005
4EEG	Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-beta-D-galactopyranose, Beta-1,4-galactosyltransferase 1, GLYCEROL, ... 著者 Ramakrishnan, B, Qasba, P.K. 登録日 2012-03-28 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Binding of N-acetylglucosamine (GlcNAc) beta 1-6-branched oligosaccharide acceptors to beta 4-galactosyltransferase I reveals a new ligand binding mode. J.Biol.Chem., 287, 2012
4AJB	3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with Isocitrate, magnesium(II) and thioNADP 分子名称: 7-THIONICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ISOCITRIC ACID, MAGNESIUM ION, ... 著者 Goncalves, S, Miller, S.P, Carrondo, M.A, Dean, A.M, Matias, P.M. 登録日 2012-02-16 公開日 2012-10-31 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Induced Fit and the Catalytic Mechanism of Isocitrate Dehydrogenase. Biochemistry, 51, 2012
4EEA	Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-Gal-Beta1,4-Glc-BETA 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Beta-1,4-galactosyltransferase 1, GLYCEROL, ... 著者 Ramakrishnan, B, Qasba, P.K. 登録日 2012-03-28 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Binding of N-acetylglucosamine (GlcNAc) beta 1-6-branched oligosaccharide acceptors to beta 4-galactosyltransferase I reveals a new ligand binding mode. J.Biol.Chem., 287, 2012
7VUD	Carotenoid Cleavage Dioxygenase 1 from Osmanthus fragrans 分子名称: Carotenoid cleavage dioxygenase 1, NICKEL (II) ION, OXTOXYNOL-10, ... 著者 Sharma, D, Xue, B. 登録日 2021-11-02 公開日 2022-11-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Carotenoid Cleavage Dioxygenase 1 from Osmanthus fragrans To Be Published
4AJS	3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with isocitrate, magnesium(II), Adenosine 2',5'-biphosphate and ribosylnicotinamide-5'-phosphate 分子名称: ADENOSINE-2'-5'-DIPHOSPHATE, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, ISOCITRATE DEHYDROGENASE [NADP], ... 著者 Goncalves, S, Miller, S.P, Carrondo, M.A, Dean, A.M, Matias, P.M. 登録日 2012-02-17 公開日 2012-10-31 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.802 Å) 主引用文献 Induced Fit and the Catalytic Mechanism of Isocitrate Dehydrogenase. Biochemistry, 51, 2012
4AEY	Crystal structure of FolX from Pseudomonas aeruginosa 分子名称: D-ERYTHRO-7,8-DIHYDRONEOPTERIN TRIPHOSPHATE EPIMERASE 著者 Gabrielsen, M, Beckham, K.S.H, Roe, A.J. 登録日 2012-01-13 公開日 2012-03-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Folx from Pseudomonas Aeruginosa is Octameric in Both Crystal and Solution. FEBS Lett., 586, 2012
4JA7	Rat PP5 co-crystallized with P5SA-2 分子名称: MAGNESIUM ION, Serine/threonine-protein phosphatase 5 著者 Haslbeck, V, Helmuth, M, Alte, F, Popowicz, G, Schmidt, W, Weiwad, M, Fischer, G, Gemmecker, G, Sattler, M, Striggow, F, Groll, M, Richter, K. 登録日 2013-02-18 公開日 2014-02-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Selective activators of protein phosphatase 5 target the auto-inhibitory mechanism. Biosci.Rep., 35, 2015
2C8V	Insights into the role of nucleotide-dependent conformational change in nitrogenase catalysis: Structural characterization of the nitrogenase Fe protein Leu127 deletion variant with bound MgATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION, ... 著者 Sen, S, Krishnakumar, A, McClead, J, Johnson, M.K, Seefeldt, L.C, Szilagyi, R.K, Peters, J.W. 登録日 2005-12-08 公開日 2006-06-01 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Insights Into the Role of Nucleotide-Dependent Conformational Change in Nitrogenase Catalysis: Structural Characterization of the Nitrogenase Fe Protein Leu127 Deletion Variant with Bound Mgatp. J.Inorg.Biochem., 100, 2006
4AJR	3D structure of E. coli Isocitrate Dehydrogenase K100M mutant in complex with alpha-ketoglutarate, magnesium(II) and NADPH - The product complex 分子名称: 2-OXOGLUTARIC ACID, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, ISOCITRATE DEHYDROGENASE [NADP], ... 著者 Goncalves, S, Miller, S.P, Carrondo, M.A, Dean, A.M, Matias, P.M. 登録日 2012-02-17 公開日 2012-10-31 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.687 Å) 主引用文献 Induced Fit and the Catalytic Mechanism of Isocitrate Dehydrogenase. Biochemistry, 51, 2012
1FU8	STRUCTURES OF GLYCOGEN PHOSPHORYLASE-INHIBITOR COMPLEXES AND THE IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN 分子名称: 1-DEOXY-1-ACETYLAMINO-BETA-D-GLUCO-2-HEPTULOPYRANOSONAMIDE, GLYCOGEN PHOSPHORYLASE, PYRIDOXAL-5'-PHOSPHATE 著者 Watson, K.A, Tsitsanou, K.E, Gregoriou, M, Zographos, S.E, Skamnaki, V.T, Oikonomakos, N.G, Fleet, G.W, Johnson, L.N. 登録日 2000-09-14 公開日 2000-10-04 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Kinetic and crystallographic studies of glucopyranose spirohydantoin and glucopyranosylamine analogs inhibitors of glycogen phosphorylase. Proteins, 61, 2005
4JJ7	Caspase-3 specific unnatural amino acid-based peptides 分子名称: Caspase inhibitor, Caspase-8, DITHIANE DIOL 著者 Vickers, C.J, Gonzalez-Paez, G.E, Wolan, D.W. 登録日 2013-03-07 公開日 2013-06-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.178 Å) 主引用文献 Selective Detection of Caspase-3 versus Caspase-7 Using Activity-Based Probes with Key Unnatural Amino Acids. Acs Chem.Biol., 8, 2013
4J8F	Crystal structure of a fusion protein containing the NBD of Hsp70 and the middle domain of Hip 分子名称: ADENOSINE-5'-DIPHOSPHATE, Heat shock 70 kDa protein 1A/1B, Hsc70-interacting protein, ... 著者 Li, Z, Bracher, A. 登録日 2013-02-14 公開日 2013-07-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure and function of Hip, an attenuator of the Hsp70 chaperone cycle. Nat.Struct.Mol.Biol., 20, 2013
1FTY	STRUCTURES OF GLYCOGEN PHOSPHORYLASE-INHIBITOR COMPLEXES AND THE IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN 分子名称: 8,9,10-TRIHYDROXY-7-HYDROXYMETHYL-3-METHYL-6-OXA-1,3-DIAZA-SPIRO[4.5]DECANE-2,4-DIONE, GLYCOGEN PHOSPHORYLASE, PYRIDOXAL-5'-PHOSPHATE 著者 Watson, K.A, Tsitsanou, K.E, Gregoriou, M, Zographos, S.E, Skamnaki, V.T, Oikonomakos, N.G, Fleet, G.W, Johnson, L.N. 登録日 2000-09-13 公開日 2000-10-04 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Kinetic and crystallographic studies of glucopyranose spirohydantoin and glucopyranosylamine analogs inhibitors of glycogen phosphorylase. Proteins, 61, 2005
2J8G	Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant in complex with a tetrasaccharide- pentapeptide) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALANINE, D-GLUTAMIC ACID, ... 著者 Perez-Dorado, I, Hermoso, J.A. 登録日 2006-10-25 公開日 2007-07-03 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Elucidation of the Molecular Recognition of Bacterial Cell Wall by Modular Pneumococcal Phage Endolysin Cpl-1. J.Biol.Chem., 282, 2007
4AE4	The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a novel SOUBA domain 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, POTASSIUM ION, ... 著者 Agromayor, M, Soler, N, Caballe, A, Kueck, T, Freund, S.M, Allen, M.D, Bycroft, M, Perisic, O, Ye, Y, McDonald, B, Scheel, H, Hofmann, K, Neil, S.J.D, Martin-Serrano, J, Williams, R.L. 登録日 2012-01-06 公開日 2012-03-21 最終更新日 2018-02-28 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a SOUBA domain. Structure, 20, 2012
4NJQ	Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CARBONATE ION, COBALT (II) ION, ... 著者 Nguyen, D.D, Pandian, R, Kim, D.Y, Ha, S.C, Yun, K.H, Kim, K.S, Kim, J.H, Kim, K.K. 登録日 2013-11-11 公開日 2014-04-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.702 Å) 主引用文献 Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa Biochem.Biophys.Res.Commun., 447, 2014

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