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3JPT
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Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro chloro methylene triphosphate
分子名称: 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
著者Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E.
登録日2009-09-04
公開日2010-06-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues.
J.Am.Chem.Soc., 132, 2010
3JPS
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Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro methyl methylene triphosphate
分子名称: 2'-deoxy-5'-O-[(S)-{[(S)-[(1R)-1-fluoro-1-phosphonoethyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ...
著者Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E.
登録日2009-09-04
公開日2010-06-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues.
J.Am.Chem.Soc., 132, 2010
3JPN
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BU of 3jpn by Molmil
Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dichloro methylene triphosphate
分子名称: 2'-deoxy-5'-O-[(S)-{[(R)-[dichloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ...
著者Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E.
登録日2009-09-04
公開日2010-06-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues.
J.Am.Chem.Soc., 132, 2010
3JPR
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BU of 3jpr by Molmil
Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dimethyl methylene triphosphate
分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(1-methyl-1-phosphonoethyl)phosphoryl]oxy}phosphoryl]guanosine, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ...
著者Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E.
登録日2009-09-04
公開日2010-06-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues.
J.Am.Chem.Soc., 132, 2010
5JCW
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Crystal Structure of hGSTP1-1 with Glutathione Adduct of Phenethyl Isothiocyanate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Kumari, V, Ji, X.
登録日2016-04-15
公開日2016-10-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.945 Å)
主引用文献Irreversible Inhibition of Glutathione S-Transferase by Phenethyl Isothiocyanate (PEITC), a Dietary Cancer Chemopreventive Phytochemical.
Plos One, 11, 2016
2AE5
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Glutaryl 7-Aminocephalosporanic Acid Acylase: mutational study of activation mechanism
分子名称: GLYCEROL, Glutaryl 7-Aminocephalosporanic Acid Acylase, SULFATE ION
著者Kim, J.K, Yang, I.S, Shin, H.J, Cho, K.J, Ryu, E.K, Kim, S.H, Park, S.S, Kim, K.H.
登録日2005-07-21
公開日2006-01-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Insight into autoproteolytic activation from the structure of cephalosporin acylase: a protein with two proteolytic chemistries.
Proc.Natl.Acad.Sci.USA, 103, 2006
2ADV
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BU of 2adv by Molmil
Crystal Structures Of Glutaryl 7-Aminocephalosporanic Acid Acylase: mutational study of activation mechanism
分子名称: Glutaryl 7- Aminocephalosporanic Acid Acylase
著者Kim, J.K, Yang, I.S, Shin, H.J, Cho, K.J, Ryu, E.K, Kim, S.H, Park, S.S, Kim, K.H.
登録日2005-07-21
公開日2006-01-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.244 Å)
主引用文献Insight into autoproteolytic activation from the structure of cephalosporin acylase: a protein with two proteolytic chemistries.
Proc.Natl.Acad.Sci.USA, 103, 2006
6HB1
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Structure of Hgh1, crystal form I
分子名称: CHLORIDE ION, Protein HGH1
著者Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A.
登録日2018-08-09
公開日2019-02-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2.
Mol.Cell, 74, 2019
6HB2
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Structure of Hgh1, crystal form I, Selenomethionine derivative
分子名称: CHLORIDE ION, Protein HGH1
著者Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A.
登録日2018-08-09
公開日2019-02-27
最終更新日2019-04-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2.
Mol.Cell, 74, 2019
6HB3
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Structure of Hgh1, crystal form II
分子名称: Protein HGH1
著者Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A.
登録日2018-08-09
公開日2019-02-27
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2.
Mol.Cell, 74, 2019
5JCU
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BU of 5jcu by Molmil
Crystal Structure of hGSTA1-1 with Glutathione Adduct of Phenethyl Isothiocyanate and Cystein Adduct of Phenethyl Isothiocyanate
分子名称: 1,2-ETHANEDIOL, Glutathione S-transferase A1, L-gamma-glutamyl-S-[(2-phenylethyl)carbamothioyl]-L-cysteinylglycine
著者Kumari, V, Ji, X.
登録日2016-04-15
公開日2016-10-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Irreversible Inhibition of Glutathione S-Transferase by Phenethyl Isothiocyanate (PEITC), a Dietary Cancer Chemopreventive Phytochemical.
Plos One, 11, 2016
6EUB
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BU of 6eub by Molmil
The fibrinogen-like domain of human Angptl4
分子名称: Angiopoietin-related protein 4, PENTAETHYLENE GLYCOL
著者Biterova, E.I, Esmaeeli, M, Alanen, H.I, Saaranen, M, Ruddock, L.W.
登録日2017-10-30
公開日2018-05-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of Angptl3 and Angptl4, modulators of triglyceride levels and coronary artery disease.
Sci Rep, 8, 2018
3NG4
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BU of 3ng4 by Molmil
Ternary complex of peptidoglycan recognition protein (PGRP-S) with Maltose and N-Acetylglucosamine at 1.7 A Resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Peptidoglycan recognition protein 1, ...
著者Sharma, P, Dube, D, Kaur, P, Sharma, S, Singh, T.P.
登録日2010-06-10
公開日2010-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Multiligand specificity of pathogen-associated molecular pattern-binding site in peptidoglycan recognition protein
J.Biol.Chem., 286, 2011
3J9V
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BU of 3j9v by Molmil
Yeast V-ATPase state 3
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
著者Zhao, J, Benlekbir, S, Rubinstein, J.L.
登録日2015-02-23
公開日2015-05-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8.3 Å)
主引用文献Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
3J9U
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Yeast V-ATPase state 2
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
著者Zhao, J, Benlekbir, S, Rubinstein, J.L.
登録日2015-02-23
公開日2015-05-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
5GAR
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BU of 5gar by Molmil
Thermus thermophilus V/A-ATPase, conformation 1
分子名称: Archaeal/vacuolar-type H+-ATPase subunit I, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Schep, D.G, Zhao, J, Rubinstein, J.L.
登録日2016-02-05
公開日2016-03-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.
Proc.Natl.Acad.Sci.USA, 113, 2016
5I1M
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BU of 5i1m by Molmil
Yeast V-ATPase average of densities, a subunit segment
分子名称: V-type proton ATPase subunit a, vacuolar isoform
著者Schep, D.G, Zhao, J, Rubinstein, J.L.
登録日2016-02-05
公開日2016-03-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.
Proc.Natl.Acad.Sci.USA, 113, 2016
5GAS
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BU of 5gas by Molmil
Thermus thermophilus V/A-ATPase, conformation 2
分子名称: Archaeal/vacuolar-type H+-ATPase subunit I, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Schep, D.G, Zhao, J, Rubinstein, J.L.
登録日2016-02-05
公開日2016-03-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.
Proc.Natl.Acad.Sci.USA, 113, 2016
3J9T
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BU of 3j9t by Molmil
Yeast V-ATPase state 1
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
著者Zhao, J, Benlekbir, S, Rubinstein, J.L.
登録日2015-02-23
公開日2015-05-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
5VVS
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BU of 5vvs by Molmil
RNA pol II elongation complex
分子名称: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
著者Lahiri, I, Leschziner, A.E.
登録日2017-05-20
公開日2017-11-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.
Nature, 551, 2017
4YNW
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BU of 4ynw by Molmil
Assembly Chaperone of RpL4 (Acl4) (Residues 1-338)
分子名称: ACL4
著者Huber, F.M, Hoelz, A.
登録日2015-03-11
公開日2015-05-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Coordinated Ribosomal L4 Protein Assembly into the Pre-Ribosome Is Regulated by Its Eukaryote-Specific Extension.
Mol.Cell, 58, 2015
4YNV
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Assembly Chaperone of RpL4 (Acl4) (Residues 28-338)
分子名称: ACL4
著者Huber, F.M, Hoelz, A.
登録日2015-03-11
公開日2015-05-13
最終更新日2020-04-15
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Coordinated Ribosomal L4 Protein Assembly into the Pre-Ribosome Is Regulated by Its Eukaryote-Specific Extension.
Mol.Cell, 58, 2015
4NCL
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BU of 4ncl by Molmil
Crystal structure of eukaryotic translation initiation factor eIF5B (517-970) from Chaetomium thermophilum in complex with GDP
分子名称: Eukaryotic translation initiation factor 5B-like protein, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Kuhle, B, Ficner, R.
登録日2013-10-24
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.115 Å)
主引用文献eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining.
Embo J., 33, 2014
7E47
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Crystal structure of compound 6 bound to MIF
分子名称: (2S,3R,4R,5R,6R)-2-[(2S,3R,4S,5R,6S)-6-(hydroxymethyl)-2-[[(2R,4R)-2-(4-hydroxyphenyl)-4,5-bis(oxidanyl)-3,4-dihydro-2H-chromen-7-yl]oxy]-4,5-bis(oxidanyl)oxan-3-yl]oxy-6-methyl-oxane-3,4,5-triol, CHLORIDE ION, Macrophage migration inhibitory factor
著者Fan, C.P, Yang, L, Guo, D.Y.
登録日2021-02-10
公開日2023-02-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
4I98
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Crystal structure of the complex between ScpA(residues 1-160)-ScpB(residues 1-183)
分子名称: Segregation and condensation protein A, Segregation and condensation protein B
著者Shin, H.C, Oh, B.H.
登録日2012-12-05
公開日2013-01-30
最終更新日2014-12-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献An asymmetric SMC-kleisin bridge in prokaryotic condensin
Nat.Struct.Mol.Biol., 20, 2013

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