PDB: 35881 件ウェブページステータス検索Chemie searchBIRD

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5L9I	Crystal structure of the periplasmic binding protein MotA in complex with DFG from A. tumefaciens B6 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Marty, L, Morera, S. 登録日 2016-06-10 公開日 2016-09-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens. J.Biol.Chem., 291, 2016
6AF9	DJ-1 with isatin bound (high concentration) 分子名称: CHLORIDE ION, ISATIN, Protein/nucleic acid deglycase DJ-1 著者 Caaveiro, J.M.M, Tashiro, S, Tsumoto, K. 登録日 2018-08-08 公開日 2018-08-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Discovery and Optimization of Inhibitors of the Parkinson's Disease Associated Protein DJ-1. ACS Chem. Biol., 13, 2018
1EQW	CRYSTAL STRUCTURE OF SALMONELLA TYPHIMURIUM CU,ZN SUPEROXIDE DISMUTASE 分子名称: COPPER (II) ION, CU,ZN SUPEROXIDE DISMUTASE, ZINC ION 著者 Pesce, A, Battistoni, A, Stroppolo, M.E, Polizio, F, Nardini, M, Kroll, J.S, Langford, P.R, O'Neill, P, Sette, M, Desideri, A, Bolognesi, M. 登録日 2000-04-06 公開日 2000-09-08 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Functional and crystallographic characterization of Salmonella typhimurium Cu,Zn superoxide dismutase coded by the sodCI virulence gene. J.Mol.Biol., 302, 2000
6KSE	Crystal Structure of E447A Acyl-CoA Dehydrogenase FadE5 mutant from Mycobacteria tuberculosisin complex with C18CoA 分子名称: Acyl-CoA dehydrogenase FadE5, FLAVIN-ADENINE DINUCLEOTIDE, STEAROYL-COENZYME A 著者 Liu, X, Chen, X.B. 登録日 2019-08-23 公開日 2020-07-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.998 Å) 主引用文献 Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria. Proc.Natl.Acad.Sci.USA, 117, 2020
2Z2X	Crystal structure of mature form of Tk-subtilisin 分子名称: CALCIUM ION, Tk-subtilisin 著者 Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2007-05-29 公開日 2007-12-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
5KSE	Flap endonuclease 1 (FEN1) R100A with 5'-flap substrate DNA and Sm3+ 分子名称: DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*AP*AP*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3'), ... 著者 Tsutakawa, S.E, Arvai, A.S, Tainer, J.A. 登録日 2016-07-08 公開日 2017-06-28 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.105 Å) 主引用文献 Phosphate steering by Flap Endonuclease 1 promotes 5'-flap specificity and incision to prevent genome instability. Nat Commun, 8, 2017
6AFF	DJ-1 with compound 8 分子名称: CHLORIDE ION, Protein/nucleic acid deglycase DJ-1, methyl 2,3-bis(oxidanylidene)-1~{H}-indole-7-carboxylate 著者 Caaveiro, J.M.M, Tashiro, S, Tsumoto, K. 登録日 2018-08-08 公開日 2018-08-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Discovery and Optimization of Inhibitors of the Parkinson's Disease Associated Protein DJ-1. ACS Chem. Biol., 13, 2018
1EVV	CRYSTAL STRUCTURE OF YEAST PHENYLALANINE TRANSFER RNA AT 2.0 A RESOLUTION 分子名称: MAGNESIUM ION, PHENYLALANINE TRANSFER RNA, SPERMINE 著者 Jovine, L, Djordjevic, S, Rhodes, D. 登録日 2000-04-20 公開日 2000-05-01 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The crystal structure of yeast phenylalanine tRNA at 2.0 A resolution: cleavage by Mg(2+) in 15-year old crystals. J.Mol.Biol., 301, 2000
6AJG	Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with SQ109 分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, DODECYL-BETA-D-MALTOSIDE, Drug exporters of the RND superfamily-like protein,Endolysin, ... 著者 Zhang, B, Li, J, Yang, X.L, Wu, L.J, Yang, H.T, Rao, Z.H. 登録日 2018-08-27 公開日 2018-12-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.604 Å) 主引用文献 Crystal Structures of Membrane Transporter MmpL3, an Anti-TB Drug Target. Cell, 176, 2019
1ETQ	THE CRYSTAL STRUCTURE OF E. COLI FIS MUTANT R71Y 分子名称: FACTOR FOR INVERSION STIMULATION 著者 Cheng, Y.S, Yang, W.Z, Johnson, R.C, Yuan, H.S. 登録日 2000-04-13 公開日 2000-10-11 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural analysis of the transcriptional activation on Fis: crystal structures of six Fis mutants with different activation properties. J.Mol.Biol., 302, 2000
8OV8	Crystal structure of Ene-reductase 1 from black poplar mushroom in complex to NADP 分子名称: Ene-reductase 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION, ... 著者 Korf, L, Essen, L.-O, Karrer, D, Ruehl, M. 登録日 2023-04-25 公開日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Shifting the substrate scope of an ene/yne-reductase by loop engineering To Be Published
3NHD	GYVLGS segment 127-132 from human prion with V129 分子名称: ACETIC ACID, Major prion protein 著者 Apostol, M.I, Eisenberg, D. 登録日 2010-06-14 公開日 2010-08-04 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Crystallographic studies of prion protein (PrP) segments suggest how structural changes encoded by polymorphism at residue 129 modulate susceptibility to human prion disease. J.Biol.Chem., 285, 2010
5KUB	Bacillus cereus DNA glycosylase AlkD bound to 7-methylguanine nucleobase and DNA containing an oxocarbenium-intermediate analog 分子名称: 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one, DNA (5'-D(*CP*CP*CP*GP*AP*(NRI)P*AP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*AP*CP*TP*CP*TP*CP*GP*GP*G)-3'), ... 著者 Mullins, E.A, Eichman, B.F. 登録日 2016-07-13 公開日 2016-09-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 A Catalytic Role for C-H/ pi Interactions in Base Excision Repair by Bacillus cereus DNA Glycosylase AlkD. J.Am.Chem.Soc., 138, 2016
6ALV	Crystal structure of H107A-peptidylglycine alpha-hydroxylating monooxygenase (PHM) mutant (no CuH bound) 分子名称: AZIDE ION, COPPER (II) ION, GLYCEROL, ... 著者 Maheshwari, S, Rudzka, K, Gabelli, S.B, Amzel, L.M. 登録日 2017-08-08 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Effects of copper occupancy on the conformational landscape of peptidylglycine alpha-hydroxylating monooxygenase. Commun Biol, 1, 2018
6AFJ	DJ-1 with compound 13 分子名称: CHLORIDE ION, Protein/nucleic acid deglycase DJ-1, butyl 2-[2,3-bis(oxidanylidene)indol-1-yl]ethanoate 著者 Caaveiro, J.M.M, Tashiro, S, Tsumoto, K. 登録日 2018-08-08 公開日 2018-08-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Discovery and Optimization of Inhibitors of the Parkinson's Disease Associated Protein DJ-1. ACS Chem. Biol., 13, 2018
8C9I	Cytochrome P450 CYP141A1 (Rv3121) from Mycobacterium tuberculosis 分子名称: Cytochrome P450 141, HEME B/C 著者 Selvam, I.R. 登録日 2023-01-23 公開日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 2.05 Angstrom structure of cytochrome P450 CYP141A1 (Rv3121) from Mycobacterium tuberculosis To Be Published
6KPC	Crystal structure of an agonist bound GPCR 分子名称: 7-[(6aR,9R,10aR)-1-Hydroxy-9-(hydroxymethyl)-6,6-dimethyl-6a,7,8,9,10,10a-hexahydro-6H-benzo[c]chromen-3-yl]- 7-methyloctanenitrile, Cannabinoid receptor 2,Endolysin 著者 Li, X.T, Hua, T, Wu, L.J, Makriyannis, A, Wu, M, Liu, Z.J. 登録日 2019-08-15 公開日 2020-02-12 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Activation and Signaling Mechanism Revealed by Cannabinoid Receptor-GiComplex Structures. Cell, 180, 2020
6KPO	Crystal Structure of endo-beta-N-acetylglucosaminidase from Cordyceps militaris D154N/E156Q mutant in complex with fucosyl-N-acetylglucosamine-Asn 分子名称: ASPARAGINE, Chitinase, DI(HYDROXYETHYL)ETHER, ... 著者 Seki, H, Arakawa, T, Yamada, C, Takegawa, K, Fushinobu, S. 登録日 2019-08-15 公開日 2019-10-02 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Structural basis for the specific cleavage of core-fucosylatedN-glycans by endo-beta-N-acetylglucosaminidase from the fungusCordyceps militaris. J.Biol.Chem., 294, 2019
6KPT	Crystal Structure of Acyl-CoA Dehydrogenase FadE5 from Mycobacteria smegmatis 分子名称: Acyl-CoA dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE 著者 Liu, X, Chen, X.B. 登録日 2019-08-16 公開日 2020-07-01 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.963 Å) 主引用文献 Structural basis for the broad substrate specificity of two acyl-CoA dehydrogenases FadE5 from mycobacteria. Proc.Natl.Acad.Sci.USA, 117, 2020
5KWE	Thermostable mutant of halohydrin dehalogenase HheC - C153N 分子名称: CHLORIDE ION, Halohydrin dehalogenase, SODIUM ION 著者 Dal Lago, M, Terwisschavvan Scheltinga, A.C. 登録日 2016-07-18 公開日 2017-01-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.684 Å) 主引用文献 A robust cosolvent-compatible halohydrin dehalogenase by computational library design. Protein Eng. Des. Sel., 30, 2017
1EWN	CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH 1,N6-ETHENOADENINE-DNA 分子名称: 3-METHYL-ADENINE DNA GLYCOSYLASE, DNA (5'-D(*GP*AP*CP*AP*TP*GP*(EDA)P*TP*TP*GP*CP*C)-3'), DNA (5'-D(P*GP*CP*AP*AP*TP*CP*AP*TP*GP*TP*CP*A)-3'), ... 著者 Lau, A.Y, Wyatt, M.D, Glassner, B.J, Samson, L.D, Ellenberger, T. 登録日 2000-04-26 公開日 2000-12-11 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Molecular basis for discriminating between normal and damaged bases by the human alkyladenine glycosylase, AAG. Proc.Natl.Acad.Sci.USA, 97, 2000
6TOE	Imine Reductase from Myxococcus stipitatus V8 variant in complex with NAD+ 分子名称: Coenzyme F420-dependent NADP oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Sharma, M, Nestl, B, Grogan, G. 登録日 2019-12-11 公開日 2020-12-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Inverting the Stereoselectivity of an NADH-Dependent Imine-Reductase Variant Chemcatchem, 2021
6KOE	X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis 分子名称: 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, AA3-600 quinol oxidase subunit I, AA3-600 quinol oxidase subunit IIII, ... 著者 Xu, J, Ding, Z, Liu, B, Li, J, Gennis, R.B, Zhu, J. 登録日 2019-08-09 公開日 2020-01-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.75 Å) 主引用文献 Structure of the cytochromeaa3-600 heme-copper menaquinol oxidase bound to inhibitor HQNO shows TM0 is part of the quinol binding site. Proc.Natl.Acad.Sci.USA, 117, 2020
8CBB	Structure of homodimeric luciferase from Enhygromyxa salina 分子名称: Alkanal monooxygenase alpha chain, SULFATE ION 著者 Yudenko, A, Remeeva, A, Gushchin, I. 登録日 2023-01-25 公開日 2024-02-07 最終更新日 2024-09-04 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 luxA Gene From Enhygromyxa salina Encodes a Functional Homodimeric Luciferase. Proteins, 2024
6TP1	Crystal structure of Bacillus paralicheniformis alpha-amylase in complex with maltotetraose 分子名称: ACETIC ACID, Amylase, CALCIUM ION, ... 著者 Rozeboom, H.J, Janssen, D.B. 登録日 2019-12-12 公開日 2020-10-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Characterization of the starch surface binding site on Bacillus paralicheniformis alpha-amylase. Int.J.Biol.Macromol., 165, 2020

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