Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8HJA
DownloadVisualize
BU of 8hja by Molmil
The crystal structure of syn_CdgR-(c-di-GMP) from Synechocystis sp. PCC 6803
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), c-di-GMP receptor
著者Zeng, X, Peng, Y.J.
登録日2022-11-22
公開日2023-03-29
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献A c-di-GMP binding effector controls cell size in a cyanobacterium.
Proc.Natl.Acad.Sci.USA, 120, 2023
5JRF
DownloadVisualize
BU of 5jrf by Molmil
Crystal structure of the light-driven sodium pump KR2 bound with iodide ions
分子名称: EICOSANE, IODIDE ION, Sodium pumping rhodopsin
著者Melnikov, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gushchin, I, Popov, A, Gordeliy, V.
登録日2016-05-06
公開日2017-05-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Fast iodide-SAD phasing for high-throughput membrane protein structure determination.
Sci Adv, 3, 2017
8ARX
DownloadVisualize
BU of 8arx by Molmil
Small molecular stabilizer for ERalpha and 14-3-3sigma (1074378)
分子名称: 14-3-3 protein sigma, 2-chloranyl-N-[[1-[1-(4-chloranylphenoxy)cyclopropyl]carbonylpiperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
著者Visser, E.J, Vandenboorn, E.M.F, Ottmann, C.
登録日2022-08-17
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8ALV
DownloadVisualize
BU of 8alv by Molmil
Small molecular stabilizer for ERalpha and 14-3-3 (1076403)
分子名称: 14-3-3 protein sigma, 2-chloranyl-N-[[1-[1-[(4-chlorophenyl)amino]cyclohexyl]carbonylpiperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
著者Visser, E.J, Vandenboorn, E.M.F, Ottmann, C.
登録日2022-08-01
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8T9Y
DownloadVisualize
BU of 8t9y by Molmil
Structure of VHH-Fab complex with engineered Elbow FNQIKG and Crystal Kappa regions
分子名称: DI(HYDROXYETHYL)ETHER, Fab heavy chain, Fab light chain, ...
著者Filippova, E.V, Thompson, I, Kossiakoff, A.A.
登録日2023-06-26
公開日2023-11-29
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8AI0
DownloadVisualize
BU of 8ai0 by Molmil
Small molecular stabilizer for ERalpha and 14-3-3sigma (1080268)
分子名称: 14-3-3 protein sigma, 2-chloranyl-N-[[1-(2-methyl-2-phenylazanyl-propanoyl)piperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
著者Visser, E.J, Vandenboorn, E.M.F, Ottmann, C.
登録日2022-07-25
公開日2023-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
7LDG
DownloadVisualize
BU of 7ldg by Molmil
Crystal structure of the MEILB2-BRCA2 complex
分子名称: Breast cancer type 2 susceptibility protein, Heat shock factor 2-binding protein
著者Nandakumar, J, Pendlebury, D.F.
登録日2021-01-13
公開日2021-08-11
最終更新日2021-08-25
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structure of a meiosis-specific complex central to BRCA2 localization at recombination sites.
Nat.Struct.Mol.Biol., 28, 2021
7BCA
DownloadVisualize
BU of 7bca by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to a direct-repeat DNA element
分子名称: DNA (5'-D(*GP*TP*AP*TP*TP*GP*AP*CP*AP*CP*CP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*GP*GP*TP*GP*TP*CP*AP*AP*TP*AP*C)-3'), KORA domain-containing protein
著者Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
登録日2020-12-18
公開日2022-07-13
最終更新日2022-12-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
6HCC
DownloadVisualize
BU of 6hcc by Molmil
STRUCTURE OF GLUA2 LIGAND-BINDING DOMAIN (S1S2J-N775S) IN COMPLEX WITH GLUTAMATE AND TDPAM02 AT 1.6 A RESOLUTION.
分子名称: 6,6'-(ETHANE-1,2-DIYL)BIS(4-CYCLOPROPYL-3,4-DIHYDRO-2H-1,2,4-BENZOTHIADIAZINE 1,1-DIOXIDE), ACETATE ION, CHLORIDE ION, ...
著者Laulumaa, S, Hansen, K.V, Frydenvang, K, Kastrup, J.S.
登録日2018-08-14
公開日2019-04-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.617 Å)
主引用文献Crystal Structures of Potent Dimeric Positive Allosteric Modulators at the Ligand-Binding Domain of the GluA2 Receptor.
Acs Med.Chem.Lett., 10, 2019
8T58
DownloadVisualize
BU of 8t58 by Molmil
Structure of VHH-Fab complex with engineered FNQIKG elbow region
分子名称: CHLORIDE ION, Fab heavy chain, Fab light chain, ...
著者Filippova, E.V, Kossiakoff, A.A.
登録日2023-06-12
公開日2023-11-29
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
7BBQ
DownloadVisualize
BU of 7bbq by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid. Apo form.
分子名称: KORA domain-containing protein
著者Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
登録日2020-12-18
公開日2022-07-13
最終更新日2022-12-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
6C8H
DownloadVisualize
BU of 6c8h by Molmil
Crystal structure of Transient Receptor Potential (TRP) channel TRPV4 in the presence of gadolinium
分子名称: GADOLINIUM ATOM, Transient receptor potential cation channel, subfamily V, ...
著者Deng, Z, Paknejad, N, Maksaev, G, Sala-Rabanal, M, Nichols, C.G, Hite, R.K, Yuan, P.
登録日2018-01-24
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (6.5 Å)
主引用文献Cryo-EM and X-ray structures of TRPV4 reveal insight into ion permeation and gating mechanisms.
Nat. Struct. Mol. Biol., 25, 2018
8T8I
DownloadVisualize
BU of 8t8i by Molmil
Structure of VHH-Fab complex with engineered Elbow FNQIKG, Crystal Kappa and SER substitutions
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Fab heavy chain, ...
著者Filippova, E.V, Thompson, I, Kossiakoff, A.A.
登録日2023-06-22
公開日2023-11-29
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
5JZK
DownloadVisualize
BU of 5jzk by Molmil
The Structure of Ultra Stable Green Fluorescent Protein
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Yong, K.J, Gunn, N.J, Scott, D.J, Griffin, M.D.W.
登録日2016-05-17
公開日2017-12-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Novel Ultra-Stable, Monomeric Green Fluorescent Protein For Direct Volumetric Imaging of Whole Organs Using CLARITY.
Sci Rep, 8, 2018
6HG7
DownloadVisualize
BU of 6hg7 by Molmil
Crystal structure of a collagen II fragment containing the binding site of PEDF and COMP, (POG)4-LKG HRG FTG LQG-POG(4)
分子名称: Collagen alpha-1(II) chain, SULFATE ION
著者Gebauer, J.M, Koehler, A, Dietmar, H, Gompert, M, Neundorf, I, Zaucke, F, Koch, M, Baumann, U.
登録日2018-08-22
公開日2018-12-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献COMP and TSP-4 interact specifically with the novel GXKGHR motif only found in fibrillar collagens.
Sci Rep, 8, 2018
1YQT
DownloadVisualize
BU of 1yqt by Molmil
RNase-L Inhibitor
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RNase l inhibitor
著者Karcher, A, Buttner, K, Martens, B, Jansen, R.P, Hopfner, K.P.
登録日2005-02-02
公開日2005-04-19
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-ray structure of RLI, an essential twin cassette ABC ATPase involved in ribosome biogenesis and HIV capsid assembly.
Structure, 13, 2005
7LHV
DownloadVisualize
BU of 7lhv by Molmil
Structure of Arabidopsis thaliana sulfate transporter AtSULTR4;1
分子名称: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, SULFATE ION, ...
著者Wang, L, Chen, K, Zhou, M.
登録日2021-01-26
公開日2021-08-11
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Structure and function of an Arabidopsis thaliana sulfate transporter.
Nat Commun, 12, 2021
8HFR
DownloadVisualize
BU of 8hfr by Molmil
NPC-trapped pre-60S particle
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Li, Z.Q, Chen, S.J, Sui, S.F.
登録日2022-11-12
公開日2023-04-12
最終更新日2023-06-28
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Nuclear export of pre-60S particles through the nuclear pore complex.
Nature, 618, 2023
5NE7
DownloadVisualize
BU of 5ne7 by Molmil
Crystal structure of H60A mutant of Thermotoga maritima TmPEP1050 aminopeptidase
分子名称: AMINOPEPTIDASE, CITRIC ACID
著者Dutoit, R.
登録日2017-03-10
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献How metal cofactors drive dimer-dodecamer transition of the M42 aminopeptidase TmPep1050 ofThermotoga maritima.
J.Biol.Chem., 294, 2019
8AMS
DownloadVisualize
BU of 8ams by Molmil
Complex of human TRIM2 RING domain, UBCH5C, and Ubiquitin
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, GLYCEROL, Polyubiquitin-C, ...
著者Perez-Borrajero, C, Kotova, I, Murciano, B, Hennig, J.
登録日2022-08-04
公開日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and biophysical studies of TRIM2 and TRIM3
To Be Published
8HBN
DownloadVisualize
BU of 8hbn by Molmil
Structure of the Mex67-Mtr2-1 heterodimer
分子名称: mRNA export factor MEX67, mRNA transport regulator MTR2
著者Li, Z.Q, Chen, S.J, Sui, S.F.
登録日2022-10-29
公開日2023-04-12
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献Nuclear export of pre-60S particles through the nuclear pore complex.
Nature, 618, 2023
8ALM
DownloadVisualize
BU of 8alm by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Munoz-Reyes, D, Sanchez-Barrena, M.J.
登録日2022-08-01
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85402 Å)
主引用文献The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
8AHY
DownloadVisualize
BU of 8ahy by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Munoz-Reyes, D, Sanchez-Barrena, M.J.
登録日2022-07-25
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
6W6G
DownloadVisualize
BU of 6w6g by Molmil
The Mycobacterium tuberculosis ClpB disaggregase hexamer structure in conformation I in the presence of DnaK chaperone and a model substrate
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Yin, Y, Li, H.
登録日2020-03-16
公開日2021-03-17
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for aggregate dissolution and refolding by the Mycobacterium tuberculosis ClpB-DnaK bi-chaperone system.
Cell Rep, 35, 2021
8ALH
DownloadVisualize
BU of 8alh by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Munoz-Reyes, D, Sanchez-Barrena, M.J.
登録日2022-08-01
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon