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7EZX
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Structure of the phycobilisome from the red alga Porphyridium purpureum in Middle Light
分子名称: Allophycocyanin alpha subunit, Allophycocyanin beta 18 subunit, Allophycocyanin beta subunit, ...
著者Ma, J.F, Sui, S.-F.
登録日2021-06-02
公開日2022-09-28
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The structural basis for light acclimation in phycobilisome light harvesting systems systems in Porphyridium purpureum
Commun Biol, 6, 2023
1IW7
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BU of 1iw7 by Molmil
Crystal structure of the RNA polymerase holoenzyme from Thermus thermophilus at 2.6A resolution
分子名称: LEAD (II) ION, MAGNESIUM ION, RNA polymerase alpha subunit, ...
著者RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-04-22
公開日2002-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution
NATURE, 417, 2002
5OT7
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BU of 5ot7 by Molmil
Elongation factor G-ribosome complex captures in the absence of inhibitors.
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Mace, K, Giudice, E, Chat, S, Gillet, R.
登録日2017-08-21
公開日2018-02-14
最終更新日2018-04-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献The structure of an elongation factor G-ribosome complex captured in the absence of inhibitors.
Nucleic Acids Res., 46, 2018
5NDV
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BU of 5ndv by Molmil
Crystal structure of Paromomycin bound to the yeast 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G.
登録日2017-03-09
公開日2017-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5OBM
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BU of 5obm by Molmil
Crystal structure of Gentamicin bound to the yeast 80S ribosome
分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G.
登録日2017-06-28
公開日2017-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5ON6
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BU of 5on6 by Molmil
Crystal structure of haemanthamine bound to the 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Pellegrino, S, Meyer, M, Yusupova, G, Yusupov, M.
登録日2017-08-03
公開日2018-02-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.10000229 Å)
主引用文献The Amaryllidaceae Alkaloid Haemanthamine Binds the Eukaryotic Ribosome to Repress Cancer Cell Growth.
Structure, 26, 2018
8G2Z
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BU of 8g2z by Molmil
48-nm doublet microtubule from Tetrahymena thermophila strain CU428
分子名称: B2B3_fMIP, B5B6_fMIP, CFAM166A, ...
著者Black, C.S, Kubo, S, Yang, S.K, Bui, K.H.
登録日2023-02-06
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins.
Nat Commun, 14, 2023
8G3D
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BU of 8g3d by Molmil
48-nm doublet microtubule from Tetrahymena thermophila strain K40R
分子名称: B2B3_fMIP, B5B6_fMIP, CFAM166A, ...
著者Black, C.S, Kubo, S, Yang, S.K, Bui, K.H.
登録日2023-02-07
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins.
Nat Commun, 14, 2023
5O61
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BU of 5o61 by Molmil
The complete structure of the Mycobacterium smegmatis 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hentschel, J, Burnside, C, Mignot, I, Leibundgut, M, Boehringer, D, Ban, N.
登録日2017-06-03
公開日2017-07-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献The Complete Structure of the Mycobacterium smegmatis 70S Ribosome.
Cell Rep, 20, 2017
5O60
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BU of 5o60 by Molmil
Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis
分子名称: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Hentschel, J, Burnside, C, Mignot, I, Leibundgut, M, Boehringer, D, Ban, N.
登録日2017-06-02
公開日2017-07-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献The Complete Structure of the Mycobacterium smegmatis 70S Ribosome.
Cell Rep, 20, 2017
8GLV
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BU of 8glv by Molmil
96-nm repeat unit of doublet microtubules from Chlamydomonas reinhardtii flagella
分子名称: 28 kDa inner dynein arm light chain, axonemal, AAA+ ATPase domain-containing protein, ...
著者Walton, T, Brown, A.
登録日2023-03-23
公開日2023-05-31
最終更新日2023-06-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Axonemal structures reveal mechanoregulatory and disease mechanisms.
Nature, 618, 2023
7VS5
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BU of 7vs5 by Molmil
The expanded head structure of phage T4
分子名称: Capsid vertex protein, Major capsid protein, Small outer capsid protein
著者Fang, Q, Tang, W, Fokine, A, Mahalingam, M, Shao, Q, Rossmann, M.G, Rao, V.B.
登録日2021-10-25
公開日2022-10-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of a large prolate virus capsid in unexpanded and expanded states generate insights into the icosahedral virus assembly.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UNG
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BU of 7ung by Molmil
48-nm repeat of the human respiratory doublet microtubule
分子名称: Cilia- and flagella-associated protein 161, Cilia- and flagella-associated protein 20, Cilia- and flagella-associated protein 45, ...
著者Gui, M, Croft, J.T, Zabeo, D, Acharya, V, Kollman, J.M, Burgoyne, T, Hoog, J.L, Brown, A.
登録日2022-04-11
公開日2022-10-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献SPACA9 is a lumenal protein of human ciliary singlet and doublet microtubules.
Proc.Natl.Acad.Sci.USA, 119, 2022
1XUP
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BU of 1xup by Molmil
ENTEROCOCCUS CASSELIFLAVUS GLYCEROL KINASE COMPLEXED WITH GLYCEROL
分子名称: GLYCEROL, Glycerol kinase
著者Yeh, J.I, Charrier, V, Paulo, J, Hou, L, Darbon, E, Hol, W.G.J, Deutscher, J.
登録日2004-10-26
公開日2004-12-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structures of Enterococcal Glycerol Kinase in the Absence and Presence of Glycerol: Correlation of Conformation to Substrate Binding and a Mechanism of Activation by Phosphorylation
Biochemistry, 43, 2004
2A69
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BU of 2a69 by Molmil
Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic rifapentin
分子名称: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
著者Artsimovitch, I, Vassylyeva, M.N, Svetlov, D, Svetlov, V, Perederina, A, Igarashi, N, Matsugaki, N, Wakatsuki, S, Tahirov, T.H, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-02
公開日2005-09-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.
Cell(Cambridge,Mass.), 122, 2005
2A68
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BU of 2a68 by Molmil
Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic rifabutin
分子名称: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
著者Artsimovitch, I, Vassylyeva, M.N, Svetlov, D, Svetlov, V, Perederina, A, Igarashi, N, Matsugaki, N, Wakatsuki, S, Tahirov, T.H, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-01
公開日2005-09-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.
Cell(Cambridge,Mass.), 122, 2005
1QZV
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BU of 1qzv by Molmil
Crystal structure of plant photosystem I
分子名称: CHLOROPHYLL A, IRON/SULFUR CLUSTER, PHYLLOQUINONE, ...
著者Ben-Shem, A, Frolow, F, Nelson, N.
登録日2003-09-18
公開日2004-01-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (4.44 Å)
主引用文献Crystal structure of plant photosystem I.
Nature, 426, 2003
2ROT
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BU of 2rot by Molmil
Structure of chimeric variant of SH3 domain- SHH
分子名称: Spectrin alpha chain, brain
著者Kutyshenko, N.P, Prokhorov, D.A, Timchenko, M.A, Kudrevatykh, Y.A, Gushchina, L.V, Khristoforov, V.S, Filimonov, V.V.
登録日2008-04-10
公開日2009-04-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of the chimeric SH3 domains, SHH- and SHA-"Bergeracs".
Biochim.Biophys.Acta, 1794, 2009
1R59
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BU of 1r59 by Molmil
Enterococcus casseliflavus glycerol kinase
分子名称: Glycerol kinase
著者Yeh, J.I, Charrier, V, Paulo, J, Hou, L, Darbon, E, Claiborne, A, Hol, W.G, Deutscher, J.
登録日2003-10-09
公開日2004-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of Enterococcal Glycerol Kinase in the Absence and Presence of Glycerol: Correlation of conformation to substrate binding and a mechanism of activation by phosphorylation
Biochemistry, 43, 2004
2X5L
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BU of 2x5l by Molmil
X-RAY STRUCTURE OF THE SUBSTRATE-FREE MYCOBACTERIUM TUBERCULOSIS CYTOCHROME P450 CYP125, ALTERNATIVE CRYSTAL FORM
分子名称: PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 125
著者Ouellet, H, Kells, P.M, Ortiz de Montellano, P.R, Podust, L.M.
登録日2010-02-10
公開日2010-11-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Reverse Type I Inhibitor of Mycobacteriumtuberculosis Cyp125A1.
Bioorg.Med.Chem.Lett., 21, 2011
2I0K
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BU of 2i0k by Molmil
Cholesterol Oxidase from Brevibacterium sterolicum- His121Ala Mutant
分子名称: CACODYLATE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Vrielink, A, Lim, L.
登録日2006-08-10
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and kinetic analyses of the H121A mutant of cholesterol oxidase.
Biochem.J., 400, 2006
2XC3
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BU of 2xc3 by Molmil
X-ray structure of Mycobacterium tuberculosis cyp125 bound to the reverse type I inhibitor
分子名称: NALPHA-[(TRANS-4-METHYLCYCLOHEXYL)CARBONYL]-N-PYRIDIN-4-YL-D-TRYPTOPHANAMIDE, PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 125
著者Ouellet, H, Kells, P.M, Ortiz de Montellano, P.R, Podust, L.M.
登録日2010-04-16
公開日2010-11-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Reverse Type I Inhibitor of Mycobacteriumtuberculosis Cyp125A1.
Bioorg.Med.Chem.Lett., 21, 2011
1SMY
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BU of 1smy by Molmil
Structural basis for transcription regulation by alarmone ppGpp
分子名称: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
著者Artsimovitch, I, Patlan, V, Sekine, S, Vassylyeva, M.N, Hosaka, T, Ochi, K, Yokoyama, S, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2004-05-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for transcription regulation by alarmone ppGpp
Cell(Cambridge,Mass.), 117, 2004
1VQM
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BU of 1vqm by Molmil
The structure of the transition state analogue "DAN" bound to the large ribosomal subunit of haloarcula marismortui
分子名称: 23S ribosomal rna, 5'-R(*CP*CP*(PPU)P*(PO2)P*(DA)P*C*C)-3'), 50S RIBOSOMAL PROTEIN L10E, ...
著者Schmeing, T.M, Steitz, T.A.
登録日2004-12-16
公開日2005-11-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Insights into the Roles of Water and the 2' Hydroxyl of the P Site tRNA in the Peptidyl Transferase Reaction.
Mol.Cell, 20, 2005
1VQ9
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The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui
分子名称: 23S ribosomal rna, 5'-R(*CP*CP*AP*(PHE)*(ACA))-3', 50S RIBOSOMAL PROTEIN L10E, ...
著者Schmeing, T.M, Steitz, T.A.
登録日2004-12-16
公開日2005-11-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Insights into the Roles of Water and the 2' Hydroxyl of the P Site tRNA in the Peptidyl Transferase Reaction.
Mol.Cell, 20, 2005

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