PDB: 1911 件ウェブページステータス検索Chemie searchBIRD

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7Z1M	Structure of yeast RNA Polymerase III Elongation Complex (EC) 分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Girbig, M, Mueller, C.W. 登録日 2022-02-24 公開日 2022-08-31 最終更新日 2022-09-21 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
8S51	RNA polymerase II core initially transcribing complex with an ordered RNA of 8 nt 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S52	RNA polymerase II core initially transcribing complex with an ordered RNA of 10 nt 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S5N	RNA polymerase II core initially transcribing complex with an ordered RNA of 12 nt 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-24 公開日 2024-04-10 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
3FKI	12-Subunit RNA Polymerase II Refined with Zn-SAD data 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Meyer, P.A, Ye, P, Suh, M.H, Zhang, M, Fu, J. 登録日 2008-12-16 公開日 2009-03-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.88 Å) 主引用文献 Structure of the 12-Subunit RNA Polymerase II Refined with the Aid of Anomalous Diffraction Data J.Biol.Chem., 284, 2009
1Y1Y	RNA Polymerase II-TFIIS-DNA/RNA complex 分子名称: 5'-D(P*TP*AP*CP*GP*CP*CP*T)-3', 5'-R(P*AP*GP*GP*C)-3', DNA-directed RNA polymerase II 13.6 kDa polypeptide, ... 著者 Cramer, P, Kettenberger, H, Armache, K.-J. 登録日 2004-11-19 公開日 2004-12-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol.Cell, 16, 2004
7NVT	RNA polymerase II core pre-initiation complex with closed promoter DNA in distal position 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
7NVU	RNA polymerase II core pre-initiation complex with open promoter DNA 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
7NVS	RNA polymerase II core pre-initiation complex with closed promoter DNA in proximal position 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
6EXV	Structure of mammalian RNA polymerase II elongation complex inhibited by Alpha-amanitin 分子名称: AMATOXIN, DNA (25-MER), DNA (36-MER), ... 著者 Liu, X, Farnung, L, Wigge, C, Cramer, P. 登録日 2017-11-09 公開日 2018-03-21 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM structure of a mammalian RNA polymerase II elongation complex inhibited by alpha-amanitin. J. Biol. Chem., 293, 2018
8S54	RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state b (composite structure) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabber, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S55	RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
3H0G	RNA Polymerase II from Schizosaccharomyces pombe 分子名称: DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Spahr, H, Calero, G, Bushnell, D.A, Kornberg, R.D. 登録日 2009-04-09 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Schizosacharomyces pombe RNA polymerase II at 3.6-A resolution. Proc.Natl.Acad.Sci.USA, 106, 2009
1I6H	RNA POLYMERASE II ELONGATION COMPLEX 分子名称: 5'-D(P*AP*AP*AP*TP*GP*CP*CP*TP*GP*GP*TP*CP*T)-3', 5'-R(P*GP*AP*CP*CP*AP*GP*GP*CP*A)-3', DNA-DIRECTED RNA POLYMERASE II 13.6KD POLYPEPTIDE, ... 著者 Gnatt, A.L, Cramer, P, Kornberg, R.D. 登録日 2001-03-02 公開日 2001-04-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution. Science, 292, 2001
5W5Y	RNA polymerase I Initial Transcribing Complex 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W66	RNA polymerase I Initial Transcribing Complex State 3 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W65	RNA polymerase I Initial Transcribing Complex State 2 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-08-02 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W64	RNA Polymerase I Initial Transcribing Complex State 1 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
1I3Q	RNA POLYMERASE II CRYSTAL FORM I AT 3.1 A RESOLUTION 分子名称: DNA-DIRECTED RNA POLYMERASE II 13.6KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 14.5KD POLYPEPTIDE, ... 著者 Cramer, P, Bushnell, D.A, Kornberg, R.D. 登録日 2001-02-15 公開日 2001-04-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution. Science, 292, 2001
2R92	Elongation complex of RNA polymerase II with artificial RdRP scaffold 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Lehmann, E, Brueckner, F, Cramer, P. 登録日 2007-09-12 公開日 2007-11-27 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Molecular basis of RNA-dependent RNA polymerase II activity. Nature, 450, 2007
2R93	Elongation complex of RNA polymerase II with a hepatitis delta virus-derived RNA stem loop 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Lehmann, E, Brueckner, F, Cramer, P. 登録日 2007-09-12 公開日 2007-11-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Molecular basis of RNA-dependent RNA polymerase II activity. Nature, 450, 2007
1I50	RNA POLYMERASE II CRYSTAL FORM II AT 2.8 A RESOLUTION 分子名称: DNA-DIRECTED RNA POLYMERASE II 13.6KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 14.5KD POLYPEPTIDE, ... 著者 Cramer, P, Bushnell, D.A, Kornberg, R.D. 登録日 2001-02-23 公開日 2001-04-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution. Science, 292, 2001
1R9T	RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA nontemplate strand, DNA template strand, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2003-10-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
1TWF	RNA polymerase II complexed with UTP at 2.3 A resolution 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
1TWC	RNA polymerase II complexed with GTP 分子名称: DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Westover, K.D, Bushnell, D.A, Kornberg, R.D. 登録日 2004-06-30 公開日 2004-11-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004

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