PDB: 909 件ウェブページステータス検索Chemie searchBIRD

---

1HD1	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0 (HNRNP D0 RBD1), NMR 分子名称: PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0) 著者 Nagata, T, Kurihara, Y, Matsuda, G, Saeki, J, Kohno, T, Yanagida, Y, Ishikawa, F, Uesugi, S, Katahira, M. 登録日 1999-05-18 公開日 2000-05-18 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structure and interactions with RNA of the N-terminal UUAG-specific RNA-binding domain of hnRNP D0. J.Mol.Biol., 287, 1999
3V4M	Crystal structure of a RNA binding domain of a U2 small nuclear ribonucleoprotein auxiliary factor 2 (U2AF) from Mus musculus at 1.80 A resolution 分子名称: CHLORIDE ION, SODIUM ION, Splicing factor U2AF 65 kDa subunit 著者 Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL) 登録日 2011-12-15 公開日 2012-06-13 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a RNA binding domain of a U2 small nuclear ribonucleoprotein auxiliary factor 2 (U2AF) from Mus musculus at 1.80 A resolution To be published
6NX5	Crystal structure of the RRM domain of S. pombe Puf1 in the P21 space group 分子名称: 1,2-ETHANEDIOL, Pumilio domain-containing protein C56F2.08c 著者 Qiu, C, Hall, T.M.T. 登録日 2019-02-08 公開日 2019-07-03 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.554 Å) 主引用文献 Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity. Nucleic Acids Res., 47, 2019
6N3E	Structure of HIV Tat-specific factor 1 U2AF Homology Motif bound to U2AF ligand motif 4 分子名称: FORMIC ACID, GLYCEROL, HIV Tat-specific factor 1, ... 著者 Loerch, S, Jenkins, J.L, Kielkopf, C.L. 登録日 2018-11-15 公開日 2019-01-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.893 Å) 主引用文献 The pre-mRNA splicing and transcription factor Tat-SF1 is a functional partner of the spliceosome SF3b1 subunit via a U2AF homology motif interface. J. Biol. Chem., 294, 2019
1P1T	NMR Structure of the N-terminal RRM domain of Cleavage stimulation factor 64 KDa subunit 分子名称: Cleavage stimulation factor, 64 kDa subunit 著者 Perez-Canadillas, J.M, Varani, G. 登録日 2003-04-14 公開日 2003-08-12 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Recognition of GU-rich polyadenylation regulatory elements by human CstF-64 protein Embo J., 22, 2003
6N3F	Structure of HIV Tat-specific factor 1 U2AF Homology Motif bound to SF3b1 ULM5 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, HIV Tat-specific factor 1, ... 著者 Leach, J.R, Jenkins, J.L, Kielkopf, C.L. 登録日 2018-11-15 公開日 2019-01-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 The pre-mRNA splicing and transcription factor Tat-SF1 is a functional partner of the spliceosome SF3b1 subunit via a U2AF homology motif interface. J. Biol. Chem., 294, 2019
3CUL	Aminoacyl-tRNA synthetase ribozyme 分子名称: MAGNESIUM ION, POTASSIUM ION, RNA (92-MER), ... 著者 Xiao, H, Murakami, H, Suga, H, Ferre-D'Amare, A.R. 登録日 2008-04-16 公開日 2008-06-24 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme. Nature, 454, 2008
1HA1	HNRNP A1 (RBD1,2) FROM HOMO SAPIENS 分子名称: HNRNP A1 著者 Shamoo, Y, Krueger, U, Rice, L, Williams, K.R, Steitz, T.A. 登録日 1996-10-30 公開日 1997-05-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of the two RNA binding domains of human hnRNP A1 at 1.75 A resolution. Nat.Struct.Biol., 4, 1997
3D2W	Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA 分子名称: DNA (5'-D(*DGP*DTP*DTP*DGP*DAP*DGP*DCP*DGP*DTP*DT)-3'), PHOSPHATE ION, TAR DNA-binding protein 43 著者 Kuo, P.H, Yuan, H.S. 登録日 2008-05-09 公開日 2009-04-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural insights into TDP-43 in nucleic-acid binding and domain interactions Nucleic Acids Res., 37, 2009
3CUN	Aminoacyl-tRNA synthetase ribozyme 分子名称: COBALT (II) ION, MAGNESIUM ION, POTASSIUM ION, ... 著者 Xiao, H, Murakami, H, Suga, H, Ferre-D'Amare, A.R. 登録日 2008-04-16 公開日 2008-06-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme. Nature, 454, 2008
1NO8	SOLUTION STRUCTURE OF THE NUCLEAR FACTOR ALY RBD DOMAIN 分子名称: ALY 著者 Perez-Alvarado, G.C, Martinez-Yamout, M, Allen, M.M, Grosschedl, R, Dyson, H.J, Wright, P.E. 登録日 2003-01-15 公開日 2003-08-12 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure of the Nuclear Factor ALY: Insights into Post-Transcriptional Regulatory and mRNA Nuclear Export Processes Biochemistry, 42, 2003
1NU4	U1A RNA binding domain at 1.8 angstrom resolution reveals a pre-organized C-terminal helix 分子名称: MAGNESIUM ION, MALONIC ACID, U1A RNA binding domain 著者 Rupert, P.B, Xiao, H, Ferre-D'Amare, A.R. 登録日 2003-01-30 公開日 2003-02-14 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 U1A RNA-binding domain at 1.8 A resolution. Acta Crystallogr.,Sect.D, 59, 2003
3G8S	Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozyme 分子名称: GLMS RIBOZYME, MAGNESIUM ION, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-12 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
1OIA	U1A rnp domain 1-95 分子名称: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A 著者 Nagai, K, Evans, P.R. 登録日 2003-06-12 公開日 2003-06-26 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of the RNA-Binding Domain of the U1 Small Nuclear Ribonucleoprotein A Nature, 348, 1990
3G8T	Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6P 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-12 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
1PO6	Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) 分子名称: 5'-D(*T*AP*GP*GP*(6MI)P*TP*TP*AP*GP*GP*G)-3', Heterogeneous nuclear ribonucleoprotein A1 著者 Myers, J.C, Moore, S.A, Shamoo, Y. 登録日 2003-06-13 公開日 2003-11-11 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-based incorporation of 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine into the human telomeric repeat DNA as a probe for UP1 binding and destabilization of G-tetrad structures J.BIOL.CHEM., 278, 2003
3VAG	Structure of U2AF65 variant with BrU3C2 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA 5'-D(*U*CP*(BRU)P*UP*UP*UP*U)-3', GLYCEROL, ... 著者 Jenkins, J.L, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
3VAH	Structure of U2AF65 variant with BrU3C4 DNA 分子名称: 1,4-DIETHYLENE DIOXIDE, DNA 5'-D(P*UP*UP*(BRU)P*CP*UP*UP*U)-3', GLYCEROL, ... 著者 Jenkins, J.L, Kielkopf, C.L. 登録日 2011-12-29 公開日 2013-02-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res., 41, 2013
3G9C	Crystal structure of the product Bacillus anthracis glmS ribozyme 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLMS RIBOZYME, MAGNESIUM ION, ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-13 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
1RKJ	Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target 分子名称: 5'-R(*GP*GP*AP*UP*GP*CP*CP*UP*CP*CP*CP*GP*AP*GP*UP*GP*CP*AP*UP*CP*C)-3', Nucleolin 著者 Johansson, C, Finger, L.D, Trantirek, L, Mueller, T.D, Kim, S, Laird-Offringa, I.A, Feigon, J. 登録日 2003-11-21 公開日 2004-04-27 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target. J.Mol.Biol., 337, 2004
3G96	Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6P 分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, GLMS RIBOZYME, MAGNESIUM ION, ... 著者 Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. 登録日 2009-02-12 公開日 2009-11-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
5DET	X-ray structure of human RBPMS in complex with the RNA 分子名称: RNA (5'-R(*UP*CP*AP*C)-3'), RNA (5'-R(P*UP*CP*AP*CP*U)-3'), RNA-binding protein with multiple splicing, ... 著者 Teplova, M, Farazi, T.A, Tuschl, T, Patel, D.J. 登録日 2015-08-25 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural basis underlying CAC RNA recognition by the RRM domain of dimeric RNA-binding protein RBPMS. Q. Rev. Biophys., 49, 2016
5KW1	Crystal Structure of the Two Tandem RRM Domains of PUF60 Bound to a Modified AdML Pre-mRNA 3' Splice Site Analogue 分子名称: CHLORIDE ION, DNA/RNA (30-MER), Poly(U)-binding-splicing factor PUF60 著者 Crichlow, G.V, Hsiao, H.-H, Albright, R, Lolis, E.J, Braddock, D.T. 登録日 2016-07-15 公開日 2017-08-23 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60. Plos One, 15, 2020
5D77	Structure of Mip6 RRM3 Domain 分子名称: CITRIC ACID, NITRATE ION, RNA-binding protein MIP6, ... 著者 Mohamad, N, Bravo, J. 登録日 2015-08-13 公開日 2016-08-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure of Mip6 RRM3 domain at 1.3 To Be Published
5KVY	CRYSTAL STRUCTURE OF THE TWO TANDEM RRM DOMAINS OF PUF60 BOUND TO A PORTION OF AN ADML PRE-MRNA 3' SPLICE SITE ANALOG 分子名称: CHLORIDE ION, DNA (30-MER), Poly(U)-binding-splicing factor PUF60 著者 Hsiao, H.-H, Crichlow, G.V, Albright, R.A, Murphy, J.W, Lolis, E.J, Braddock, D.T. 登録日 2016-07-15 公開日 2017-08-23 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60. Plos One, 15, 2020

<12345678910111213141516>