PDB: 190 件ウェブページステータス検索Chemie searchBIRD

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5W71	X-ray structure of BtrR from Bacillus circulans in the presence of the 2-DOS external aldimine 分子名称: CHLORIDE ION, L-glutamine:2-deoxy-scyllo-inosose aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Zachman-Brockmeyer, T.R, Thoden, J.B, Holden, H.M. 登録日 2017-06-19 公開日 2017-07-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structure of RbmB from Streptomyces ribosidificus, an aminotransferase involved in the biosynthesis of ribostamycin. Protein Sci., 26, 2017
5W70	X-ray Structure of RbmB from Streptomyces ribosidificus 分子名称: 1,2-ETHANEDIOL, L-glutamine:2-deoxy-scyllo-inosose aminotransferase, [4-({[(1R,2S,3S,4R,5S)-5-amino-2,3,4-trihydroxycyclohexyl]amino}methyl)-5-hydroxy-6-methylpyridin-3-yl]methyl dihydrogen phosphate 著者 Zachman-Brockmeyer, T.R, Thoden, J.B, Holden, H.M. 登録日 2017-06-19 公開日 2017-07-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structure of RbmB from Streptomyces ribosidificus, an aminotransferase involved in the biosynthesis of ribostamycin. Protein Sci., 26, 2017
2IX8	MODEL FOR EEF3 BOUND TO AN 80S RIBOSOME 分子名称: ELONGATION FACTOR 3A 著者 Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R. 登録日 2006-07-07 公開日 2007-07-10 最終更新日 2017-08-23 実験手法 ELECTRON MICROSCOPY (6 Å) 主引用文献 Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site. Nature, 443, 2006
7CSI	Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Sisomicin 分子名称: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aminoglycoside 2'-N-acetyltransferase, COENZYME A 著者 Jeong, C.S, Hwang, J, Do, H, Lee, J.H. 登録日 2020-08-14 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis. Sci Rep, 10, 2020
7CRM	Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-APO Structure 分子名称: 1,2-ETHANEDIOL, Aminoglycoside 2'-N-acetyltransferase 著者 Jeong, C.S, Hwang, J, Do, H, Lee, J.H. 登録日 2020-08-13 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.487 Å) 主引用文献 Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis. Sci Rep, 10, 2020
7CSJ	Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Gentamicin 分子名称: Aminoglycoside 2'-N-acetyltransferase, COENZYME A, gentamicin C1 著者 Jeong, C.S, Hwang, J, Do, H, Lee, J.H. 登録日 2020-08-14 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.168 Å) 主引用文献 Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis. Sci Rep, 10, 2020
5F47	Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with trehalose 分子名称: CALCIUM ION, CHLORIDE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, ... 著者 Xu, Z, Skarina, T, Wawrzak, Z, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2015-12-03 公開日 2015-12-30 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.497 Å) 主引用文献 Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes. ACS Infect Dis, 3, 2017
1LVJ	STRUCTURE OF TAR RNA COMPLEXED WITH A TAT-TAR INTERACTION NANOMOLAR INHIBITOR THAT WAS IDENTIFIED BY COMPUTATIONAL SCREENING 分子名称: 1-[10-(3-DIMETHYLAMINO-PROPYL)-10H-PHENOTHIAZIN-2-YL]-ETHANONE, HIV-1 Trans Activating Region RNA 著者 Du, Z, Lind, K.E, James, T.L. 登録日 2002-05-28 公開日 2002-12-11 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure of TAR RNA complexed with a Tat-TAR interaction nanomolar inhibitor that was identified by computational screening CHEM.BIOL., 9, 2002
6BFF	Structure of the aminoglycoside acetyltransferase AAC(6')-Im 分子名称: Aminoglycoside acetyltransferase, MAGNESIUM ION 著者 Smith, C.A, Vakulenko, S.B. 登録日 2017-10-26 公開日 2017-11-08 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Aminoglycoside resistance profile and structural architecture of the aminoglycoside acetyltransferase AAC(6')-Im. Microb Cell, 4, 2017
6BFH	Structure of the kanamycin complex of aminoglycoside acetyltransferase AAC(6')-Im 分子名称: Aminoglycoside acetyltransferase, GLYCEROL, KANAMYCIN A 著者 Smith, C.A, Vakulenko, S.B. 登録日 2017-10-26 公開日 2017-11-08 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Aminoglycoside resistance profile and structural architecture of the aminoglycoside acetyltransferase AAC(6')-Im. Microb Cell, 4, 2017
6MN0	Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H168A mutant in complex with acetyl-CoA 分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETYL COENZYME *A, Aminoglycoside N(3)-acetyltransferase, ... 著者 Stogios, P.J, Skarina, T, Zu, X, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2018-10-01 公開日 2018-10-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family. Commun Biol, 5, 2022
2ET5	Complex Between Ribostamycin and the 16S-RRNA A-Site 分子名称: 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3', RIBOSTAMYCIN, SULFATE ION 著者 Westhof, E. 登録日 2005-10-27 公開日 2005-12-13 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding. Nucleic Acids Res., 33, 2005
2ESI	Complex between Kanamycin A and the 16S-Rrna A Site. 分子名称: 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3', KANAMYCIN A 著者 Westhof, E. 登録日 2005-10-26 公開日 2005-12-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding Nucleic Acids Res., 33, 2005
2ET3	Complex Between Gentamicin C1A and the 16S-RRNA A-Site 分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3' 著者 Westhof, E. 登録日 2005-10-27 公開日 2005-12-13 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding. Nucleic Acids Res., 33, 2005
2ESJ	Complex between Lividomycin A and the 16S-Rrna A Site 分子名称: (2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R ,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMET HYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL, 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3' 著者 Westhof, E. 登録日 2005-10-26 公開日 2005-12-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding Nucleic Acids Res., 33, 2005

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