PDB: 2059 件ウェブページステータス検索Chemie searchBIRD

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6RXZ	Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state b 分子名称: 35S ribosomal RNA, 40S ribosomal protein S11-like protein, 40S ribosomal protein S13-like protein, ... 著者 Cheng, J, Kellner, N, Griesel, S, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2019-06-10 公開日 2019-08-14 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration. Mol.Cell, 75, 2019
7KAT	Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore ring and Sec63 FN3 double mutant, class without Sec62 分子名称: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... 著者 Itskanov, S, Park, E. 登録日 2020-10-01 公開日 2021-01-06 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62. Nat.Struct.Mol.Biol., 28, 2021
6G4W	Cryo-EM structure of a late human pre-40S ribosomal subunit - State A 分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-28 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G53	Cryo-EM structure of a late human pre-40S ribosomal subunit - State E 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-28 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
7SYL	Structure of the HCV IRES bound to the 40S ribosomal subunit, closed conformation. Structure 6(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYI	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 3(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
3M9S	Crystal structure of respiratory complex I from Thermus thermophilus 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Efremov, R.G, Baradaran, R, Sazanov, L.A. 登録日 2010-03-22 公開日 2010-05-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 The architecture of respiratory complex I Nature, 465, 2010
6IP6	Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T. 登録日 2018-11-02 公開日 2019-05-29 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 HCV IRES Captures an Actively Translating 80S Ribosome. Mol.Cell, 74, 2019
5GW5	Structure of TRiC-AMP-PNP 分子名称: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ... 著者 Zang, Y, Jin, M, Wang, H, Cong, Y. 登録日 2016-09-08 公開日 2016-10-26 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM. Nat. Struct. Mol. Biol., 23, 2016
7SYU	Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYH	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 2(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Molecular architecture of 40S initiation complexes on the Hepatitis C virus IRES: from ribosomal attachment to eIF5B-mediated reorientation of initiator tRNA To Be Published
7SYO	Structure of the HCV IRES bound to the 40S ribosomal subunit, head open. Structure 9(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S2, HCV IRES, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-27 最終更新日 2022-08-24 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
8I7J	Yeast 40S-eIF4B - partially open conformation of the 40S head 分子名称: 40S ribosomal protein S0, 40S ribosomal protein S1, 40S ribosomal protein S12, ... 著者 Datey, A, Khaja, F.T, Hussain, T. 登録日 2023-01-31 公開日 2024-02-07 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Yeast eukaryotic initiation factor 4B remodels the mRNA entry site on the small ribosomal subunit To Be Published
7AJT	Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Flemming, D, Venuta, G.L, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2020-09-29 公開日 2020-12-30 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Mol.Cell, 81, 2021
5GW4	Structure of Yeast NPP-TRiC 分子名称: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ... 著者 Zang, Y, Jin, M, Wang, H, Cong, Y. 登録日 2016-09-08 公開日 2016-10-26 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM. Nat. Struct. Mol. Biol., 23, 2016
7QP6	Structure of the human 48S initiation complex in open state (h48S AUG open) 分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N. 登録日 2022-01-03 公開日 2022-05-11 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Conformational rearrangements upon start codon recognition in human 48S translation initiation complex. Nucleic Acids Res., 50, 2022
3JBN	Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein eS1, ... 著者 Sun, M, Li, W, Blomqvist, K, Das, S, Hashem, Y, Dvorin, J.D, Frank, J. 登録日 2015-09-16 公開日 2015-10-14 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Dynamical features of the Plasmodium falciparum ribosome during translation. Nucleic Acids Res., 43, 2015
7ZRS	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R. 登録日 2022-05-05 公開日 2023-02-22 最終更新日 2023-03-01 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structural basis for clearing of ribosome collisions by the RQT complex. Nat Commun, 14, 2023
7SYJ	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 4(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYM	Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 7(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S2, 40S ribosomal protein S21, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Comprehensive structural overview of the HCV IRES-mediated translation initiation pathway To Be Published
6LQV	Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S11-A, ... 著者 Du, Y, Ye, K. 登録日 2020-01-14 公開日 2020-09-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states. Science, 369, 2020
6ZQF	Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-B (Poly-Ala) 分子名称: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... 著者 Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2020-07-09 公開日 2020-09-23 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 90 S pre-ribosome transformation into the primordial 40 S subunit. Science, 369, 2020
3JAP	Structure of a partial yeast 48S preinitiation complex in closed conformation 分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ... 著者 Llacer, J.L, Hussain, T, Ramakrishnan, V. 登録日 2015-06-18 公開日 2015-08-12 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex. Mol.Cell, 59, 2015
8BTD	Giardia Ribosome in PRE-T Hybrid State (D1) 分子名称: 5.8S rRNA, 5S rRNA, Large Subunit rRNA, ... 著者 Majumdar, S, Emmerich, A.G, Sanyal, S. 登録日 2022-11-28 公開日 2023-03-22 最終更新日 2023-05-03 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Insights into translocation mechanism and ribosome evolution from cryo-EM structures of translocation intermediates of Giardia intestinalis. Nucleic Acids Res., 51, 2023
6XU7	Drosophila melanogaster Testis polysome ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ... 著者 Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L. 登録日 2020-01-17 公開日 2021-07-28 最終更新日 2022-12-21 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Nucleic Acids Res., 50, 2022

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