PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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3QVG	XRCC1 bound to DNA ligase 分子名称: DNA ligase 3, DNA repair protein XRCC1 著者 Cuneo, M.J, Krahn, J.M, London, R.E. 登録日 2011-02-25 公開日 2011-06-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes. Nucleic Acids Res., 39, 2011
3SBM	Trans-acting transferase from Disorazole synthase in complex with Acetate 分子名称: ACETATE ION, DisD protein, HEXAETHYLENE GLYCOL 著者 Khosla, C, Mathews, I.I, Wong, F.T, Jin, X. 登録日 2011-06-06 公開日 2011-07-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structure and Mechanism of the trans-Acting Acyltransferase from the Disorazole Synthase. Biochemistry, 50, 2011
3V1A	Crystal structure of de novo designed MID1-apo1 分子名称: Computational design, MID1-apo1 著者 Der, B.S, Machius, M, Miley, M.J, Kuhlman, B. 登録日 2011-12-09 公開日 2012-01-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (0.98 Å) 主引用文献 Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer. J.Am.Chem.Soc., 134, 2012
3V1E	Crystal structure of de novo designed MID1-zinc H12E mutant 分子名称: Computational design, MID1-zinc H12E mutant, ZINC ION 著者 Der, B.S, Machius, M, Miley, M.J, Kuhlman, B. 登録日 2011-12-09 公開日 2012-01-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.073 Å) 主引用文献 Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer. J.Am.Chem.Soc., 134, 2012
2F5Z	Crystal Structure of Human Dihydrolipoamide Dehydrogenase (E3) Complexed to the E3-Binding Domain of Human E3-Binding Protein 分子名称: Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, Pyruvate dehydrogenase protein X component, ... 著者 Brautigam, C.A, Chuang, J.L, Wynn, R.M, Tomchick, D.R, Machius, M, Chuang, D.T. 登録日 2005-11-28 公開日 2006-01-17 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Structural Insight into Interactions between Dihydrolipoamide Dehydrogenase (E3) and E3 Binding Protein of Human Pyruvate Dehydrogenase Complex. Structure, 14, 2006
4G3X	Crystal Structure of Q61L H-Ras-GppNHp bound to the RBD of Raf Kinase 分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... 著者 Fetics, S.K, Kearney, B.M, Buhrman, G, Mattos, C. 登録日 2012-07-15 公開日 2013-07-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Allosteric Effects of the Oncogenic RasQ61L Mutant on Raf-RBD. Structure, 23, 2015
4FX6	Crystal structure of the mutant V182A.R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2012-07-02 公開日 2013-05-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.531 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
3UL9	structure of the TV3 mutant M41E 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Toll-like receptor 4, ... 著者 Kim, H.J, Cheong, H.K, Jeon, Y.H. 登録日 2011-11-10 公開日 2012-05-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structure-Based Rational Design of a Toll-like Receptor 4 (TLR4) Decoy Receptor with High Binding Affinity for a Target Protein. Plos One, 7, 2012
4GC4	Crystal structure of the mutant R160A.R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2012-07-29 公開日 2013-06-19 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.4204 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
3V1C	Crystal structure of de novo designed MID1-zinc 分子名称: Computational design, MID1-zinc, L(+)-TARTARIC ACID, ... 著者 Der, B.S, Machius, M, Miley, M.J, Kuhlman, B. 登録日 2011-12-09 公開日 2012-01-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.129 Å) 主引用文献 Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer. J.Am.Chem.Soc., 134, 2012
4FXR	Crystal structure of the mutant T159V.R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2012-07-03 公開日 2013-05-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.708 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
2HQW	Crystal Structure of Ca2+/Calmodulin bound to NMDA Receptor NR1C1 peptide 分子名称: CALCIUM ION, Calmodulin, Glutamate NMDA receptor subunit zeta 1 著者 Akyol, Z, Gakhar, L, Sorensen, B.R, Hell, J.H, Shea, M.A. 登録日 2006-07-19 公開日 2007-11-13 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The NMDA Receptor NR1 C1 Region Bound to Calmodulin: Structural Insights into Functional Differences between Homologous Domains. Structure, 15, 2007
5RLA	ALTERING THE BINUCLEAR MANGANESE CLUSTER OF ARGINASE DIMINISHES THERMOSTABILITY AND CATALYTIC FUNCTION 分子名称: ARGINASE, MANGANESE (II) ION 著者 Scolnick, L.R, Kanyo, Z.F, Christianson, D.W. 登録日 1997-05-07 公開日 1998-05-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Altering the binuclear manganese cluster of arginase diminishes thermostability and catalytic function. Biochemistry, 36, 1997
3V1D	Crystal structure of de novo designed MID1-cobalt 分子名称: COBALT (II) ION, Computational design, MID1-cobalt, ... 著者 Der, B.S, Machius, M, Miley, M.J, Kuhlman, B. 登録日 2011-12-09 公開日 2012-01-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.239 Å) 主引用文献 Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer. J.Am.Chem.Soc., 134, 2012
3V1F	Crystal structure of de novo designed MID1-zinc H35E mutant 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Computational design, ... 著者 Der, B.S, Machius, M, Miley, M.J, Kuhlman, B. 登録日 2011-12-09 公開日 2012-01-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.151 Å) 主引用文献 Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer. J.Am.Chem.Soc., 134, 2012
2LPZ	Atomic model of the Type-III Secretion System Needle 分子名称: Protein prgI 著者 Loquet, A, Sgourakis, N.G, Gupta, R, Giller, K, Riedel, D, Goosmann, C, Griesinger, C, Kolbe, M.G, Baker, D, Becker, S, Lange, A. 登録日 2012-02-21 公開日 2012-05-16 最終更新日 2024-05-15 実験手法 SOLID-STATE NMR 主引用文献 Atomic model of the type III secretion system needle. Nature, 486, 2012
3QEZ	Crystal structure of the mutant T159V,V182A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-01-20 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5431 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
2L7L	Solution structure of Ca2+/calmodulin complexed with a peptide representing the calmodulin-binding domain of calmodulin kinase I 分子名称: CALCIUM ION, Calcium/calmodulin-dependent protein kinase type 1, Calmodulin 著者 Gifford, J.L, Ishida, H, Vogel, H.J. 登録日 2010-12-13 公開日 2011-05-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Fast methionine-based solution structure determination of calcium-calmodulin complexes. J.Biomol.Nmr, 50, 2011
2FHZ	Molecular Basis of Inhibition of the Ribonuclease Activity in Colicin E5 by Its Cognate Immunity Protein 分子名称: Colicin-E5, Colicin-E5 immunity protein 著者 Lin, Y.L, Huang, R.H. 登録日 2005-12-27 公開日 2006-03-28 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Molecular basis of inhibition of the ribonuclease activity in colicin e5 by its cognate immunity protein J.Mol.Biol., 358, 2006
2DPQ	The crystal structures of the calcium-bound con-G and con-T(K7gamma) dimeric peptides demonstrate a novel metal-dependent helix-forming motif 分子名称: CALCIUM ION, CHLORIDE ION, Conantokin-G 著者 Cnudde, S.E, Prorok, M, Dai, Q, Castellino, F.J, Geiger, J.H. 登録日 2006-05-13 公開日 2007-04-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 The crystal structures of the calcium-bound con-G and con-T[K7gamma] dimeric peptides demonstrate a metal-dependent helix-forming motif J.Am.Chem.Soc., 129, 2007
4KYI	Crystal structure of the phospholipase VipD from Legionella pneumophila in complex with the human GTPase Rab5 分子名称: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ... 著者 Lucas, M, Gaspar, A.H, Pallara, C, Rojas, A.L, Fernandez-Recio, J, Machner, M.P, Hierro, A. 登録日 2013-05-29 公開日 2014-08-13 最終更新日 2015-07-29 実験手法 X-RAY DIFFRACTION (3.075 Å) 主引用文献 Structural basis for the recruitment and activation of the Legionella phospholipase VipD by the host GTPase Rab5. Proc.Natl.Acad.Sci.USA, 111, 2014
3UL8	Crystal structure of the TV3 mutant V134L 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Toll-like receptor 4, ... 著者 Kim, H.J, Cheong, H.K, Jeon, Y.H. 登録日 2011-11-10 公開日 2012-04-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure-Based Rational Design of a Toll-like Receptor 4 (TLR4) Decoy Receptor with High Binding Affinity for a Target Protein. Plos One, 7, 2012
2K0E	A Coupled Equilibrium Shift Mechanism in Calmodulin-Mediated Signal Transduction 分子名称: CALCIUM ION, Calmodulin 著者 Gsponer, J, Christodoulou, J, Cavalli, A, Bui, J.M, Richter, B, Dobson, C.M, Vendruscolo, M. 登録日 2008-02-02 公開日 2008-06-10 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 A coupled equilibrium shift mechanism in calmodulin-mediated signal transduction Structure, 16, 2008
2F74	Murine MHC class I H-2Db in complex with human b2-microglobulin and LCMV-derived immunodminant peptide gp33 分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ... 著者 Achour, A, Michaelsson, J, Harris, R.A, Ljunggren, H.G, Karre, K, Schneider, G, Sandalova, T. 登録日 2005-11-30 公開日 2006-02-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Basis of the Differential Stability and Receptor Specificity of H-2D(b) in Complex with Murine versus Human beta(2)-Microglobulin. J.Mol.Biol., 356, 2006
3V1P	Crystal structure of the mutant Q185A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase, SULFATE ION 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-12-09 公開日 2012-11-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012

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