PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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7CDV	STRUCTURE OF A NOVEL VIRULENCE REGULATION FACTOR SghR 分子名称: LacI-type transcription factor 著者 Ye, F.Z, Wang, C, Yan, X.F, Zhang, L.H, Gao, Y.G. 登録日 2020-06-20 公開日 2020-07-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis of a novel repressor, SghR, controllingAgrobacteriuminfection by cross-talking to plants. J.Biol.Chem., 295, 2020
6D7M	Crystal structure of the W184R/W231R Importin alpha mutant 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Peroxidase,Importin subunit alpha-1, ... 著者 Pedersen, L.C, London, R.E, Gabel, S.A. 登録日 2018-04-25 公開日 2019-03-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.187 Å) 主引用文献 Variations in nuclear localization strategies among pol X family enzymes. Traffic, 2018
3U38	Intercalation of lambda-[Ru(phen)2(dppz)]2+ into d(CCGGTACCGG)2 分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', BARIUM ION, Lambda-Ru(phen)2(dppz) complex 著者 Cardin, C.J, Hall, J.P, Niyazi, H. 登録日 2011-10-05 公開日 2012-07-04 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Crystal structures of lambda-[Ru(phen)2dppz]2+ with oligonucleotides containing TA/TA and AT/AT steps show two intercalation modes Nat Chem, 4, 2012
7CGY	Human DMC1 Q244M mutant of the post-synaptic complexes 分子名称: CALCIUM ION, Meiotic recombination protein DMC1/LIM15 homolog, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 著者 Chi, H.Y, Ho, M.C, Tsai, M.D, Luo, S.C, Yeh, H.Y. 登録日 2020-07-03 公開日 2020-11-18 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures. Nat Commun, 12, 2021
1LJ9	The crystal structure of the transcriptional regulator SlyA 分子名称: transcriptional regulator SlyA 著者 Wu, R.Y, Zhang, R.G, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2002-04-19 公開日 2003-01-21 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of Enterococcus faecalis SlyA-like transcriptional factor J.Biol.Chem., 278, 2003
7CDX	Complex STRUCTURE OF A NOVEL VIRULENCE REGULATION FACTOR SghR with its effector sucrose 分子名称: LacI-type transcription factor, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose 著者 Ye, F.Z, Wang, C, Yan, X.F, Zhang, L.H, Gao, Y.G. 登録日 2020-06-20 公開日 2020-07-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.103 Å) 主引用文献 Structural basis of a novel repressor, SghR, controllingAgrobacteriuminfection by cross-talking to plants. J.Biol.Chem., 295, 2020
4MGW	Comparison of the structural and dynamic effects of 5-methylcytosine and 5-chlorocytosine in a CpG dinucleotide sequence 分子名称: ClC containing Dickerson-Drew dodecamer, MAGNESIUM ION 著者 Theruvathu, J.A, Whitney, Y, Montgomery Pettitt, B, Sowers, L.C. 登録日 2013-08-29 公開日 2013-11-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Comparison of the structural and dynamic effects of 5-methylcytosine and 5-chlorocytosine in a CpG dinucleotide sequence. Biochemistry, 52, 2013
2JJ7	Crystal structure of the HlyIIR mutant protein with residues 170-185 substituted by alanine 分子名称: HEMOLYSIN II REGULATORY PROTEIN 著者 Kovalevskiy, O.V, Antson, A.A, Solonin, A.S. 登録日 2008-03-18 公開日 2008-04-08 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 [Contraction of the disordered loop located within C-terminal domain of the transcriptional regulator HlyIIR causes its structural rearrangement]. Mol.Biol.(Moscow), 43, 2009
2L8B	TraI (381-569) 分子名称: Protein traI 著者 Wright, N.T, Raththagala, M.U, Edwards, S, Krueger, S, Schildbach, J.F. 登録日 2011-01-07 公開日 2012-01-11 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure and small angle scattering analysis of TraI (381-569). Proteins, 80, 2012
2LWW	NMR structure of RelA-TAD/CBP-TAZ1 complex 分子名称: CREB-binding protein, Nuclear transcription factor RelA, ZINC ION 著者 Mukherjee, S.P, Ghosh, G, Wright, P.E. 登録日 2012-08-07 公開日 2013-09-11 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Analysis of the RelA:CBP/p300 Interaction Reveals Its Involvement in NF-kappa B-Driven Transcription. Plos Biol., 11, 2013
5EXP	AAA+ domain of FleQ from Pseudomonas aeruginosa 分子名称: 1,2-ETHANEDIOL, SULFATE ION, Transcriptional regulator FleQ 著者 Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.Y. 登録日 2015-11-24 公開日 2016-01-13 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa. Proc.Natl.Acad.Sci.USA, 113, 2016
6ZMU	Crystal structure of the germline-specific thioredoxin protein Deadhead (Thioredoxin-1) from Drospohila melanogaster, P43212 分子名称: SODIUM ION, SULFATE ION, Thioredoxin-1 著者 Baginski, B, Pluta, R, Macias, M.J. 登録日 2020-07-03 公開日 2020-10-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structures of the germline-specific Deadhead and thioredoxin T proteins from Drosophila melanogaster reveal unique features among thioredoxins. Iucrj, 8, 2021
4QHT	Crystal structure of AAA+/ sigma 54 activator domain of the flagellar regulatory protein FlrC from Vibrio cholerae in ATP analog bound state 分子名称: 1,2-ETHANEDIOL, Flagellar regulatory protein C, MAGNESIUM ION, ... 著者 Dey, S, Biswas, M, Sen, U, Dasgupta, J. 登録日 2014-05-29 公開日 2014-07-16 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.559 Å) 主引用文献 Unique ATPase site architecture triggers cis-mediated synchronized ATP binding in heptameric AAA+-ATPase domain of flagellar regulatory protein FlrC J.Biol.Chem., 290, 2015
5EXS	AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to ATP-gamma-S 分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transcriptional regulator FleQ 著者 Navarro, M.V.A.S, Sondermann, H, Matsuyama, B. 登録日 2015-11-24 公開日 2016-01-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa. Proc.Natl.Acad.Sci.USA, 113, 2016
8BFR	The E. coli TrpD2 protein YbiB at 1.3 A resolution 分子名称: GLYCEROL, Protein YbiB 著者 Deckers, B, Galicia, C, Versees, W. 登録日 2022-10-26 公開日 2023-02-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 YbiB: a novel interactor of the GTPase ObgE. Nucleic Acids Res., 51, 2023
8BFT	The E. coli TrpD2 protein YbiB in complex with a C-terminal peptide from ObgE 分子名称: DI(HYDROXYETHYL)ETHER, GTPase ObgE/CgtA, Protein YbiB 著者 Deckers, B, Galicia, C, Versees, W. 登録日 2022-10-26 公開日 2023-02-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 YbiB: a novel interactor of the GTPase ObgE. Nucleic Acids Res., 51, 2023
1B44	CRYSTAL STRUCTURE OF THE B SUBUNIT OF HEAT-LABILE ENTEROTOXIN FROM E. COLI CARRYING A PEPTIDE WITH ANTI-HSV ACTIVITY 分子名称: PROTEIN (B-POL SUBUNIT OF HEAT-LABILE ENTEROTOXIN) 著者 Matkovic-Calogovic, D, Loregian, A, D'Acunto, M.R, Battistutta, R, Tossi, A, Palu, G, Zanotti, G. 登録日 1999-01-04 公開日 1999-01-13 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal structure of the B subunit of Escherichia coli heat-labile enterotoxin carrying peptides with anti-herpes simplex virus type 1 activity. J.Biol.Chem., 274, 1999
2ING	X-ray Structure of the BRCA1 BRCT mutant M1775K 分子名称: Breast cancer type 1 susceptibility protein, COBALT (II) ION, SULFATE ION 著者 Birrane, G, Soni, A, Ladias, J.A.A. 登録日 2006-10-07 公開日 2007-09-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Pathogenicity of the BRCA1 missense variant M1775K is determined by the disruption of the BRCT phosphopeptide-binding pocket: a multi-modal approach. Eur.J.Hum.Genet., 16, 2008
4F2Y	Structure of 3'-Fluoro Cyclohexenyl Nucleic Acid Decamer 分子名称: 5'-D(*GP*CP*GP*TP*AP*(XTF)P*AP*CP*GP*C)-3', MAGNESIUM ION 著者 Pallan, P.S, Egli, M. 登録日 2012-05-08 公開日 2012-05-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Synthesis and Antisense Properties of Fluoro Cyclohexenyl Nucleic Acid (F-CeNA), a Nuclease Stable Mimic of 2'-Fluoro RNA. J.Org.Chem., 77, 2012
5MK5	Structures of DHBN domain of human BLM helicase 分子名称: Bloom syndrome protein, IODIDE ION, POTASSIUM ION 著者 Shi, J, Chen, W.-F, Zhang, B, Fan, S.-H, Ai, X, Liu, N.-N, Rety, S, Xi, X.-G. 登録日 2016-12-02 公開日 2017-03-01 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 A helical bundle in the N-terminal domain of the BLM helicase mediates dimer and potentially hexamer formation. J. Biol. Chem., 292, 2017
4F2X	Structure of 3'-Fluoro Cyclohexenyl Nucleic Acid Heptamer 分子名称: 5'-D(*CP*GP*CP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*(XTF)P*GP*CP*G)-3', COBALT (III) ION, ... 著者 Pallan, P.S, Egli, M. 登録日 2012-05-08 公開日 2012-05-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Synthesis and Antisense Properties of Fluoro Cyclohexenyl Nucleic Acid (F-CeNA), a Nuclease Stable Mimic of 2'-Fluoro RNA. J.Org.Chem., 77, 2012
7KTQ	Nucleosome from a dimeric PRC2 bound to a nucleosome 分子名称: 601 DNA (167-MER), Histone H2A, Histone H2B, ... 著者 Grau, D.J, Armache, K.J. 登録日 2020-11-24 公開日 2021-02-03 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structures of monomeric and dimeric PRC2:EZH1 reveal flexible modules involved in chromatin compaction. Nat Commun, 12, 2021
8BU2	Structure of DDB1 bound to DS18-engaged CDK12-cyclin K 分子名称: Cyclin-K, Cyclin-dependent kinase 12, DNA damage-binding protein 1, ... 著者 Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H. 登録日 2022-11-30 公開日 2023-09-13 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (3.13 Å) 主引用文献 Design principles for cyclin K molecular glue degraders. Nat.Chem.Biol., 20, 2024
8BUI	Structure of DDB1 bound to DRF-053-engaged CDK12-cyclin K 分子名称: (2~{R})-2-[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)amino]purin-2-yl]amino]butan-1-ol, 1,2-ETHANEDIOL, Cyclin-K, ... 著者 Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H. 登録日 2022-11-30 公開日 2023-09-13 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Design principles for cyclin K molecular glue degraders. Nat.Chem.Biol., 20, 2024
8BUA	Structure of DDB1 bound to 919278-engaged CDK12-cyclin K 分子名称: (2~{R})-~{N}-(1~{H}-benzimidazol-2-yl)-2-(3-oxidanylidene-1~{H}-isoindol-2-yl)propanamide, CITRIC ACID, Cyclin-K, ... 著者 Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H. 登録日 2022-11-30 公開日 2023-09-13 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (3.193 Å) 主引用文献 Design principles for cyclin K molecular glue degraders. Nat.Chem.Biol., 20, 2024

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