Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ODD
DownloadVisualize
BU of 3odd by Molmil
Comparison of the character and the speed of X-ray-induced structural changes of porcine pancreatic elastase at two temperatures, 100 and 15K. The data set was collected from region B of the crystal. Second step of radiation damage
分子名称: Chymotrypsin-like elastase family member 1, SODIUM ION, SULFATE ION
著者Petrova, T, Ginell, S, Mitschler, A, Cousido-Siah, A, Hazemann, I, Podjarny, A, Joachimiak, A.
登録日2010-08-11
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献X-ray-induced deterioration of disulfide bridges at atomic resolution.
Acta Crystallogr.,Sect.D, 66, 2010
2W7U
DownloadVisualize
BU of 2w7u by Molmil
SplA serine protease of Staphylococcus aureus (2.4A)
分子名称: SERINE PROTEASE SPLA
著者Stec-Niemczyka, J, Pustelny, K, Kisielewska, M, Bista, M, Boulware, K.T, Stennicke, H.R, Thogersen, I.B, Daugherty, P.S, Enghild, J.J, Popowicz, G.M, Dubin, A, Potempa, J, Dubin, G.
登録日2008-12-30
公開日2010-03-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural and Functional Characterization of Spla, an Exclusively Specific Protease of Staphylococcus Aureus.
Biochem.J., 419, 2009
3OGP
DownloadVisualize
BU of 3ogp by Molmil
Crystal Structure of 6s-98S FIV Protease with Darunavir bound
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, DIMETHYL SULFOXIDE, FIV Protease
著者Lin, Y.-C, Perryman, A.L, Elder, J.H, Stout, C.D.
登録日2010-08-17
公開日2011-06-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for drug and substrate specificity exhibited by FIV encoding a chimeric FIV/HIV protease.
Acta Crystallogr.,Sect.D, 67, 2011
3OGJ
DownloadVisualize
BU of 3ogj by Molmil
Crystal structure of partial apo (92-227) of cGMP-dependent protein kinase
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, PHOSPHATE ION, PRKG1 protein
著者Kim, J.J, Huang, G, Kwon, T.K, Zwart, P, Headd, J, Kim, C.
登録日2010-08-16
公開日2011-05-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献Co-Crystal Structures of PKG Ibeta (92-227) with cGMP and cAMP Reveal the Molecular Details of Cyclic-Nucleotide Binding
Plos One, 6, 2011
3OHF
DownloadVisualize
BU of 3ohf by Molmil
Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with bms-655295 aka n~3~-((1s,2r)-1- benzyl-2-hydroxy-3-((3-methoxybenzyl)amino)propyl)-n~1~, n~1~-dibutyl-1h-indole-1,3-dicarboxamide
分子名称: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
著者Muckelbauer, J.K.
登録日2010-08-17
公開日2011-04-06
最終更新日2017-03-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Synthesis and SAR of indole-and 7-azaindole-1,3-dicarboxamide hydroxyethylamine inhibitors of BACE-1.
Bioorg.Med.Chem.Lett., 21, 2011
2WD0
DownloadVisualize
BU of 2wd0 by Molmil
CRYSTAL STRUCTURE OF NONSYNDROMIC DEAFNESS (DFNB12) ASSOCIATED MUTANT D124G OF MOUSE CADHERIN-23 EC1-2
分子名称: CADHERIN-23, CALCIUM ION, CHLORIDE ION, ...
著者Sotomayor, M, Weihofen, W, Gaudet, R, Corey, D.P.
登録日2009-03-18
公開日2010-04-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Structural Determinants of Cadherin-23 Function in Hearing and Deafness.
Neuron, 66, 2010
7XGY
DownloadVisualize
BU of 7xgy by Molmil
cryo-EM structure of hemoglobin
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Liu, N, Wang, H.W.
登録日2022-04-07
公開日2022-11-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Uniform thin ice on ultraflat graphene for high-resolution cryo-EM.
Nat.Methods, 20, 2023
3OK5
DownloadVisualize
BU of 3ok5 by Molmil
Structure of the H55D mutant of dehaloperoxidase-hemoglobin A from Amphitriti ornata with 4-Bromophenol inhibitor
分子名称: 4-BROMOPHENOL, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Zhao, J, De Serrano, V.S, Franzen, S.
登録日2010-08-24
公開日2011-09-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Effect of the H55D mutation on the kinetics and structure of dehaloperoxidase-hemoglobin A
To be Published
3OK0
DownloadVisualize
BU of 3ok0 by Molmil
E35A Mutant of Hen Egg White Lysozyme (HEWL)
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者O'Meara, F, Bradley, J, O'Rourke, P.E, Webb, H, Tynan-Connolly, B.M, Nielsen, J.E.
登録日2010-08-24
公開日2011-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献E35A Mutant of Hen Egg White Lysozyme (HEWL)
TO BE PUBLISHED
2VUH
DownloadVisualize
BU of 2vuh by Molmil
Crystal structure of the D55E mutant of the HupR receiver domain
分子名称: HYDROGENASE TRANSCRIPTIONAL REGULATORY PROTEIN HUPR1
著者Davies, K.M, Lowe, E.D, Venien-Bryan, C, Johnson, L.N.
登録日2008-05-26
公開日2008-11-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Hupr Receiver Domain Crystal Structure in its Nonphospho and Inhibitory Phospho States.
J.Mol.Biol., 385, 2009
2VWF
DownloadVisualize
BU of 2vwf by Molmil
Grb2 SH3C (2)
分子名称: GRB2-ASSOCIATED-BINDING PROTEIN 2, GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
著者Harkiolaki, M, Tsirka, T, Feller, S.M.
登録日2008-06-24
公開日2009-05-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Distinct Binding Modes of Two Epitopes in Gab2 that Interact with the Sh3C Domain of Grb2.
Structure, 17, 2009
3OJ1
DownloadVisualize
BU of 3oj1 by Molmil
Structure of the H55D mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata
分子名称: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Zhao, J, De Serrano, V.S, Franzen, S.
登録日2010-08-20
公開日2011-08-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Effect of the H55D mutation on the kinetics and structure of dehaloperoxidase-hemoglobin A
To be Published
3OJP
DownloadVisualize
BU of 3ojp by Molmil
D52N Mutant of Hen Egg White Lysozyme (HEWL)
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者O'Meara, F, Bradley, J, O'Rourke, P.E, Webb, H, Tynan-Connolly, B.M, Nielsen, J.E.
登録日2010-08-23
公開日2011-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献D52N Mutant of Hen Egg White Lysozyme (HEWL)
TO BE PUBLISHED
3OO3
DownloadVisualize
BU of 3oo3 by Molmil
Crystal Structure of the Orf6* (CYP165D3) Monooxygenase Involved in Teicoplanin Biosynthesis
分子名称: Oxy protein, PROTOPORPHYRIN IX CONTAINING FE
著者Li, Z, Nair, S.K.
登録日2010-08-30
公開日2011-01-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a phenol-coupling P450 monooxygenase involved in teicoplanin biosynthesis.
Proteins, 79, 2011
2VOC
DownloadVisualize
BU of 2voc by Molmil
THIOREDOXIN A ACTIVE SITE MUTANTS FORM MIXED DISULFIDE DIMERS THAT RESEMBLE ENZYME-SUBSTRATE REACTION INTERMEDIATE
分子名称: DI(HYDROXYETHYL)ETHER, THIOREDOXIN
著者Kouwen, T.R.H.M, Andrell, J, Schrijver, R, Dubois, J.Y.F, Maher, M.J, Iwata, S, Carpenter, E.P, van Dijl, J.M.
登録日2008-02-13
公開日2009-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Thioredoxin A active-site mutants form mixed disulfide dimers that resemble enzyme-substrate reaction intermediates.
J. Mol. Biol., 379, 2008
3OR0
DownloadVisualize
BU of 3or0 by Molmil
Semi-synthetic ribonuclease S: cyanylated homocysteine at position 13
分子名称: Ribonuclease pancreatic
著者Fafarman, A.T, Boxer, S.G.
登録日2010-09-05
公開日2010-10-20
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Nitrile bonds as infrared probes of electrostatics in ribonuclease S.
J.Phys.Chem.B, 114, 2010
2VUI
DownloadVisualize
BU of 2vui by Molmil
Crystal structure of the HupR receiver domain in inhibitory phospho- state
分子名称: BERYLLIUM TRIFLUORIDE ION, HYDROGENASE TRANSCRIPTIONAL REGULATORY PROTEIN HUPR1, MAGNESIUM ION
著者Davies, K.M, Lowe, E.D, Venien-Bryan, C, Johnson, L.N.
登録日2008-05-26
公開日2008-11-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Hupr Receiver Domain Crystal Structure in its Nonphospho and Inhibitory Phospho States.
J.Mol.Biol., 385, 2009
3OO4
DownloadVisualize
BU of 3oo4 by Molmil
R-state human hemoglobin: nitriheme modified at alpha
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, NITRITE ION, ...
著者Yi, J, Thormas, L.M, Richter-Addo, G.B.
登録日2010-08-30
公開日2011-09-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic Trapping of Heme Loss Intermediates during the Nitrite-Induced Degradation of Human Hemoglobin.
Biochemistry, 50, 2011
3OV1
DownloadVisualize
BU of 3ov1 by Molmil
Crystal Structure of the Grb2 SH2 Domain in Complex with a pYXN-Derived Tripeptide
分子名称: FORMIC ACID, GLYCEROL, Growth factor receptor-bound protein 2, ...
著者Clements, J.H, Martin, S.F.
登録日2010-09-15
公開日2011-11-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protein-ligand interactions: thermodynamic effects associated with increasing nonpolar surface area.
J.Am.Chem.Soc., 133, 2011
2V8E
DownloadVisualize
BU of 2v8e by Molmil
Crystal structure of Human Complement Factor H, SCR domains 6-8 (H402 risk variant), in complex with ligand.
分子名称: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, CHLORIDE ION, COMPLEMENT FACTOR H, ...
著者Prosser, B.E, Johnson, S, Roversi, P, Herbert, A.P, Blaum, B.S, Tyrrell, J, Jowitt, T.A, Clark, S.J, Tarelli, E, Uhrin, D, Barlow, P.N, Sim, R.B, Day, A.J, Lea, S.M.
登録日2007-08-07
公開日2007-10-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Complement Factor H Linked Age-Related Macular Degeneration.
J.Exp.Med., 204, 2007
7WYG
DownloadVisualize
BU of 7wyg by Molmil
Crystal structure of P450BSbeta-L78I/Q85H/G290I variant in complex with palmitic acid.
分子名称: Cytochrome P450 152A1, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
著者Li, F, He, C, Wang, X.
登録日2022-02-16
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Biocatalytic Enantioselective beta-Hydroxylation of Unactivated C-H Bonds in Aliphatic Carboxylic Acids.
Angew.Chem.Int.Ed.Engl., 61, 2022
2VJ6
DownloadVisualize
BU of 2vj6 by Molmil
Human BACE-1 in complex with N-((1S,2R)-3-(((1S)-2-(cyclohexylamino)- 1-methyl-2-oxoethyl)amino)-2-hydroxy-1-(phenylmethyl)propyl)-3-(ethylamino)-5-(2-oxo-1-pyrrolidinyl)benzamide
分子名称: BETA-SECRETASE 1, N-[(1S,2R)-1-benzyl-3-{[(1S)-2-(cyclohexylamino)-1-methyl-2-oxoethyl]amino}-2-hydroxypropyl]-3-(ethylamino)-5-(2-oxopyrrolidin-1-yl)benzamide
著者Clarke, B, Demont, E, Dingwall, C, Dunsdon, R, Faller, A, Hawkins, J, Hussain, I, MacPherson, D, Maile, G, Matico, R, Milner, P, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Riddell, D, Rowland, P, Soleil, V, Smith, K, Stanway, S, Stemp, G, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Ward, J, Wayne, G.
登録日2007-12-06
公開日2008-01-29
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Bace-1 Inhibitors Part 2: Identification of Hydroxy Ethylamines (Heas) with Reduced Peptidic Character.
Bioorg.Med.Chem.Lett., 18, 2008
3OIA
DownloadVisualize
BU of 3oia by Molmil
Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC1-C8GluEtg-Bio
分子名称: Camphor 5-monooxygenase, N-{15-oxo-19-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-4,7,10-trioxa-14-azanonadec-1-yl}-N'-(8-{[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-ylcarbonyl]amino}octyl)pentanediamide, POTASSIUM ION, ...
著者Lee, Y.-T, Wilson, R.F, Glazer, E.C, Goodin, D.B.
登録日2010-08-18
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC1-C8GluEtg-Bio
To be Published
7Y6A
DownloadVisualize
BU of 7y6a by Molmil
Crystal structure of Chicken Egg Lysozyme
分子名称: Lysozyme C, NITRATE ION
著者DeMirci, H.
登録日2022-06-18
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source " Turkish DeLight ".
Turk J Biol, 47, 2023
2VLX
DownloadVisualize
BU of 2vlx by Molmil
Crystal structure of peroxymyoglobin generated by cryoradiolytic reduction of myoglobin compound III
分子名称: GLYCEROL, HYDROGEN PEROXIDE, MYOGLOBIN, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2008-01-20
公開日2009-02-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The Crystal Structure of Peroxymyoglobin Generated Through Cryoradiolytic Reduction of Myoglobin Compound III During Data Collection.
Biochem.J., 412, 2008

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon