Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TQM
DownloadVisualize
BU of 8tqm by Molmil
Cryo-EM structure of E3 ubiquitin ligase Doa10 from Saccharomyces cerevisiae
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, ERAD-associated E3 ubiquitin-protein ligase DOA10, ...
著者Park, E, Itskanov, S.I.
登録日2023-08-07
公開日2024-03-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Substrate recognition mechanism of the endoplasmic reticulum-associated ubiquitin ligase Doa10.
Nat Commun, 15, 2024
6N6N
DownloadVisualize
BU of 6n6n by Molmil
FtsY-NG high-resolution
分子名称: ACETATE ION, GLYCEROL, MAGNESIUM ION, ...
著者Ataide, S.F, Faoro, C.
登録日2018-11-26
公開日2019-10-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.877 Å)
主引用文献Structural insights into the G-loop dynamics of E. coli FtsY NG domain.
J.Struct.Biol., 208, 2019
5DIQ
DownloadVisualize
BU of 5diq by Molmil
Crystal structure of human FPPS in complex with salicylic acid derivative 3a
分子名称: 2-(naphthalen-1-ylmethoxy)benzoic acid, Farnesyl pyrophosphate synthase, GLYCEROL, ...
著者Rondeau, J.M, Bourgier, E, Lehmann, S.
登録日2015-09-01
公開日2015-09-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of Novel Allosteric Non-Bisphosphonate Inhibitors of Farnesyl Pyrophosphate Synthase by Integrated Lead Finding.
Chemmedchem, 10, 2015
4RGZ
DownloadVisualize
BU of 4rgz by Molmil
Crystal structure of recombinant prolidase from Thermococcus sibiricus at P21221 spacegroup
分子名称: PHOSPHATE ION, Xaa-Pro aminopeptidase, ZINC ION
著者Timofeev, V.I, Korgenevsky, D.A, Gorbacheva, M.A, Boyko, K.M, Slutsky, E, Rakitina, T.V, Lipkin, A.V, Popov, V.O.
登録日2014-10-01
公開日2015-08-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of recombinant prolidase from Thermococcus sibiricus in space group P21221.
Acta Crystallogr.,Sect.F, 71, 2015
5LQK
DownloadVisualize
BU of 5lqk by Molmil
Crystal Structure of COMT in complex with N-[(E)-3-[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]prop-2-enyl]-2,3-dihydroxy-5-[(4-methylphenyl)methyl]benzamide
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, Catechol O-methyltransferase, ...
著者Ehler, A, Lerner, C, Rudolph, M.G.
登録日2016-08-17
公開日2016-08-31
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal Structure of COMT
To be published
2JAA
DownloadVisualize
BU of 2jaa by Molmil
SeMet substituted Shigella Flexneri Ipad
分子名称: INVASIN IPAD
著者Johnson, S, Roversi, P, Espina, M, Olive, A, Deane, J.E, Birket, S, Field, T, Picking, W.D, Blocker, A.J, Galyov, E.E, Picking, W.L, Lea, S.M.
登録日2006-11-24
公開日2006-11-30
最終更新日2017-06-28
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Self-Chaperoning of the Type III Secretion System Needle Tip Proteins Ipad and Bipd.
J.Biol.Chem., 282, 2007
1FM4
DownloadVisualize
BU of 1fm4 by Molmil
CRYSTAL STRUCTURE OF THE BIRCH POLLEN ALLERGEN BET V 1L
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, MAJOR POLLEN ALLERGEN BET V 1-L
著者Markovic-Housley, Z, Degano, M, Lamba, D, von Roepenack-Lahaye, E, Clemens, S, Susani, M, Ferreira, F, Scheiner, O, Breiteneder, H.
登録日2000-08-16
公開日2002-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal Structure of a Hypoallergenic Isoform of the Major Birch Pollen Allergen Bet v 1 and its Likely Biological Function as a Plant Steroid Carrier
J.Mol.Biol., 325, 2003
1ABT
DownloadVisualize
BU of 1abt by Molmil
NMR SOLUTION STRUCTURE OF AN ALPHA-BUNGAROTOXIN(SLASH)NICOTINIC RECEPTOR PEPTIDE COMPLEX
分子名称: ALPHA-BUNGAROTOXIN, NICOTINIC RECEPTOR PEPTIDE
著者Basus, V.J, Song, G, Hawrot, E.
登録日1993-11-17
公開日1994-01-31
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献NMR solution structure of an alpha-bungarotoxin/nicotinic receptor peptide complex.
Biochemistry, 32, 1993
1AC7
DownloadVisualize
BU of 1ac7 by Molmil
STRUCTURAL FEATURES OF THE DNA HAIRPIN D(ATCCTAGTTATAGGAT): THE FORMATION OF A G-A BASE PAIR IN THE LOOP, NMR, 10 STRUCTURES
分子名称: DNA (5'-D(*AP*TP*CP*CP*TP*AP*GP*TP*TP*AP*TP*AP*GP*GP*AP*T)-3')
著者Van Dongen, M.J.P, Mooren, M.M.W, Willems, E.F.A, Van Der Marel, G.A, Van Boom, J.H, Wijmenga, S.S, Hilbers, C.W.
登録日1997-02-14
公開日1997-07-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural features of the DNA hairpin d(ATCCTA-GTTA-TAGGAT): formation of a G-A base pair in the loop.
Nucleic Acids Res., 25, 1997
8TBQ
DownloadVisualize
BU of 8tbq by Molmil
The crystal structure of human VISTA extra cellular domain in complex with Fab fragment of pH-selective anti-VISTA antibody
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, SNS-101 Fab heavy chain, ...
著者van der Horst, E.H, Mukherjee, A, Thisted, T.
登録日2023-06-29
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.593 Å)
主引用文献The pH-selective anti-VISTA antibody SNS-101 displays a favorable pharmacokinetic and safety profile and promotes anti-tumoral M1 macrophage polarization in PD-1 refractory settings
To Be Published
5ECW
DownloadVisualize
BU of 5ecw by Molmil
Structure of the Shigella flexneri VapC mutant D7A
分子名称: tRNA(fMet)-specific endonuclease VapC
著者Xu, K, Dedic, E, Brodersen, D.E.
登録日2015-10-20
公開日2016-02-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri.
Proteins, 84, 2016
4L6D
DownloadVisualize
BU of 4l6d by Molmil
Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with vanillic acid
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-HYDROXY-3-METHOXYBENZOATE, 5-carboxyvanillate decarboxylase, ...
著者Fedorov, A.A, Fedorov, E.V, Vladimirova, A, Raushel, F.M, Almo, S.C.
登録日2013-06-12
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with vanillic acid
To be Published
6NC1
DownloadVisualize
BU of 6nc1 by Molmil
FtsY-NG high-resolution
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者Ataide, S.F, Faoro, C.
登録日2018-12-10
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Structural insights into the G-loop dynamics of E. coli FtsY NG domain.
J.Struct.Biol., 208, 2019
5LVL
DownloadVisualize
BU of 5lvl by Molmil
Human PDK1 Kinase Domain in Complex with Compound PS653 Bound to the ATP-Binding Site
分子名称: 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE, 3-phosphoinositide-dependent protein kinase 1, DIMETHYL SULFOXIDE, ...
著者Schulze, J.O, Saladino, G, Busschots, K, Neimanis, S, Suess, E, Odadzic, D, Zeuzem, S, Hindie, V, Herbrand, A.K, Lisa, M.N, Alzari, P.M, Gervasio, F.L, Biondi, R.M.
登録日2016-09-14
公開日2016-10-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Bidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase.
Cell Chem Biol, 23, 2016
7UIT
DownloadVisualize
BU of 7uit by Molmil
Cryo-EM of pH-controlled and self-assembled fibers, peptide 2
分子名称: Peptide 2
著者Wang, F, Grosvirt-Dramen, A, Hochbaum, A.I, Egelman, E.H.
登録日2022-03-29
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM of pH-controlled and self-assembled fibers, peptide 2
To Be Published
2VZC
DownloadVisualize
BU of 2vzc by Molmil
Crystal structure of the C-terminal calponin homology domain of alpha parvin
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Lorenz, S, Vakonakis, I, Lowe, E.D, Campbell, I.D, Noble, M.E.M, Hoellerer, M.K.
登録日2008-07-31
公開日2008-10-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural Analysis of the Interactions between Paxillin Ld Motifs and Alpha-Parvin
Structure, 16, 2008
4IVZ
DownloadVisualize
BU of 4ivz by Molmil
A Y37F mutant of C.Esp1396I bound to its highest affinity operator site OM
分子名称: DNA (5'-D(*AP*TP*GP*TP*AP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*TP*CP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*TP*AP*CP*A)-3'), Regulatory protein
著者Martin, R.N.A, McGeehan, J.E, Kneale, G.G.
登録日2013-01-23
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I.
Plos One, 9, 2014
4Y1W
DownloadVisualize
BU of 4y1w by Molmil
Vis toxin, an ADP-ribosyltransferase from Vibrio Splendidus
分子名称: NAD(+)--arginine ADP-ribosyltransferase Vis
著者Ravulapalli, R, Tempel, W, Merrrill, A.R.
登録日2015-02-09
公開日2015-11-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Characterization of Vis Toxin, a Novel ADP-Ribosyltransferase from Vibrio splendidus.
Biochemistry, 54, 2015
2CNI
DownloadVisualize
BU of 2cni by Molmil
Structural Insights into the Design of Nonpeptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B
分子名称: MAGNESIUM ION, METHYL 2-{[5-({3-CHLORO-4-[(5S)-1,1-DIOXIDO-3-OXOISOTHIAZOLIDIN-5-YL]-N-(PHENYLSULFONYL)-L-PHENYLALANYL}AMINO)PENTYL]OXY}-6-HYDROXYBENZOATE, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
著者Ala, P.J, Gonneville, L, Hillman, M, Becker-Pasha, M, Yue, E.W, Douty, B, Wayland, B, Polam, P, Crawley, M.L, McLaughlin, E, Sparks, R.B, Glass, B, Takvorian, A, Combs, A.P, Burn, T.C, Hollis, G.F, Wynn, R.
登録日2006-05-21
公開日2006-09-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Insights Into the Design of Nonpeptidic Isothiazolidinone-Containing Inhibitors of Protein- Tyrosine Phosphatase 1B.
J.Biol.Chem., 281, 2006
5EI0
DownloadVisualize
BU of 5ei0 by Molmil
Structure of RCL-cleaved vaspin (serpinA12)
分子名称: Serpin A12
著者Pippel, J, Kuettner, B.E, Ulbricht, D, Daberger, J, Schultz, S, Heiker, J.T, Strater, N.
登録日2015-10-29
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of cleaved vaspin (serpinA12).
Biol.Chem., 397, 2016
1OEG
DownloadVisualize
BU of 1oeg by Molmil
PEPTIDE OF HUMAN APOE RESIDUES 267-289, NMR, 5 STRUCTURES AT PH 6.0, 37 DEGREES CELSIUS AND PEPTIDE:SDS MOLE RATIO OF 1:90
分子名称: APOLIPOPROTEIN E
著者Wang, G, Pierens, G.K, Treleaven, W.D, Sparrow, J.T, Cushley, R.J.
登録日1996-03-16
公開日1996-12-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Conformations of human apolipoprotein E(263-286) and E(267-289) in aqueous solutions of sodium dodecyl sulfate by CD and 1H NMR.
Biochemistry, 35, 1996
4IPY
DownloadVisualize
BU of 4ipy by Molmil
HIV capsid C-terminal domain
分子名称: 1,2-ETHANEDIOL, Capsid protein p24
著者Lampel, A, Yaniv, O, Berger, O, Bachrach, E, Gazit, E, Frolow, F.
登録日2013-01-10
公開日2013-10-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献A triclinic crystal structure of the carboxy-terminal domain of HIV-1 capsid protein with four molecules in the asymmetric unit reveals a novel packing interface.
Acta Crystallogr.,Sect.F, 69, 2013
1HXE
DownloadVisualize
BU of 1hxe by Molmil
SERINE PROTEASE
分子名称: HIRUDIN VARIANT-1, RUBIDIUM ION, THROMBIN
著者Tulinsky, A, Zhang, E.
登録日1995-12-07
公開日1996-11-08
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The molecular environment of the Na+ binding site of thrombin.
Biophys.Chem., 63, 1997
1HL6
DownloadVisualize
BU of 1hl6 by Molmil
A novel mode of RBD-protein recognition in the Y14-mago complex
分子名称: CG8781 PROTEIN, MAGO NASHI PROTEIN
著者Fribourg, S, Gatfield, D, Yao, W, Izaurralde, E, Conti, E.
登録日2003-03-13
公開日2003-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Novel Mode of Rbd-Protein Recognition in the Y14-Mago Complex
Nat.Struct.Biol., 10, 2003
6BQG
DownloadVisualize
BU of 6bqg by Molmil
Crystal structure of 5-HT2C in complex with ergotamine
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 5-hydroxytryptamine receptor 2C,Soluble cytochrome b562, Ergotamine
著者Peng, Y, McCorvy, J.D, Harpsoe, K, Lansu, K, Yuan, S, Popov, P, Qu, L, Pu, M, Che, T, Nikolajse, L.F, Huang, X.P, Wu, Y, Shen, L, Bjorn-Yoshimoto, W.E, Ding, K, Wacker, D, Han, G.W, Cheng, J, Katritch, V, Jensen, A.A, Hanson, M.A, Zhao, S, Gloriam, D.E, Roth, B.L, Stevens, R.C, Liu, Z.
登録日2017-11-27
公開日2018-02-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献5-HT2C Receptor Structures Reveal the Structural Basis of GPCR Polypharmacology.
Cell, 172, 2018

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon