PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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3SNC	Crystal structure of SARS coronavirus main protease complexed with Ac-NSTSQ-H (soaking) 分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, Peptide aldehyde inhibitor Ac-NSTSQ-H 著者 Zhu, L, Hilgenfeld, R. 登録日 2011-06-29 公開日 2011-09-07 最終更新日 2012-12-12 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease. Antiviral Res., 92, 2011
1H5S	Thymidylyltransferase complexed with TMP 分子名称: Glucose-1-phosphate thymidylyltransferase 1, THYMIDINE-5'-PHOSPHATE 著者 Rosano, C, Zuccotti, S, Bolognesi, M. 登録日 2001-05-25 公開日 2001-11-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Kinetic and crystallographic analyses support a sequential-ordered bi bi catalytic mechanism for Escherichia coli glucose-1-phosphate thymidylyltransferase. J. Mol. Biol., 313, 2001
8PK8	Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on ISCU2) 分子名称: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ... 著者 Steinhilper, R, Murphy, B.J. 登録日 2023-06-26 公開日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.49 Å) 主引用文献 Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2. Nat Commun, 15, 2024
1GQW	Taurine/alpha-ketoglutarate Dioxygenase from Escherichia coli 分子名称: 2-AMINOETHANESULFONIC ACID, 2-OXOGLUTARIC ACID, ALPHA-KETOGLUTARATE-DEPENDENT TAURINE DIOXYGENASE, ... 著者 Elkins, J.M, Ryle, M.J, Clifton, I.J, Dunning-Hotopp, J.C, Lloyd, J.S, Burzlaff, N.I, Baldwin, J.E, Hausinger, R.P, Roach, P.L. 登録日 2001-12-05 公開日 2002-04-18 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 X-Ray Crystal Structure of Escherichia Coli Taurine/Alpha-Ketoglutarate Dioxygenase Complexed to Ferrous Iron and Substrates Biochemistry, 41, 2002
8PK9	Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on NFS1 and ISCU2) 分子名称: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ... 著者 Steinhilper, R, Murphy, B.J. 登録日 2023-06-26 公開日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2. Nat Commun, 15, 2024
3SPI	Inward rectifier potassium channel Kir2.2 in complex with PIP2 分子名称: Inward-rectifier K+ channel Kir2.2, POTASSIUM ION, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate 著者 Hansen, S.B, Tao, X, MacKinnon, R. 登録日 2011-07-01 公開日 2011-08-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.307 Å) 主引用文献 Structural basis of PIP(2) activation of the classical inward rectifier K(+) channel Kir2.2. Nature, 477, 2011
1H5T	Thymidylyltransferase complexed with Thymidylyldiphosphate-glucose 分子名称: 2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE, Glucose-1-phosphate thymidylyltransferase 1, SULFATE ION, ... 著者 Rosano, C, Zuccotti, S, Bolognesi, M. 登録日 2001-05-25 公開日 2001-11-23 最終更新日 2018-12-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Kinetic and Crystallographic Analyses Support a Sequential-Ordered Bi Bi Catalytic Mechanism for Escherichia Coli Glucose-1-Phosphate Thymidylyltransferase J.Mol.Biol., 313, 2001
3T1B	Crystal structure of the full-length AphB N100E variant 分子名称: Transcriptional regulator, LysR family 著者 Taylor, J.L, De Silva, R.S, Kovacikova, G, Lin, W, Taylor, R.K, Skorupski, K, Kull, F.J. 登録日 2011-07-21 公開日 2011-11-23 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH. Mol.Microbiol., 83, 2012
3I3A	Structural Basis for the Sugar Nucleotide and Acyl Chain Selectivity of Leptospira interrogans LpxA 分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, S-[2-({N-[(2R)-2-hydroxy-4-{[(S)-hydroxy(methoxy)phosphoryl]oxy}-3,3-dimethylbutanoyl]-beta-alanyl}amino)ethyl] (3R)-3-hydroxydodecanethioate 著者 Williams, A.H. 登録日 2009-06-30 公開日 2009-09-01 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structural basis for the sugar nucleotide and acyl-chain selectivity of Leptospira interrogans LpxA. Biochemistry, 48, 2009
3I59	Crystal structure of MtbCRP in complex with N6-cAMP 分子名称: (2R)-N6-(1-Methyl-2-phenylethyl)adenosine-3',5'-cyclic monophosphate, (2S)-N6-(1-Methyl-2-phenylethyl)adenosine-3',5'-cyclic monophosphate, CHLORIDE ION, ... 著者 Reddy, M.C, Palaninathan, S.K, Bruning, J.B, Thurman, C, Smith, D, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC) 登録日 2009-07-03 公開日 2009-09-08 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structural Insights into the Mechanism of the Allosteric Transitions of Mycobacterium tuberculosis cAMP Receptor Protein. J.Biol.Chem., 284, 2009
4MDT	Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine 分子名称: PHOSPHATE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ZINC ION, ... 著者 Clayton, G.M, Klein, D.J, Rickert, K.W, Patel, S.B, Kornienko, M, Zugay-Murphy, J, Reid, J.C, Tummala, S, Sharma, S, Singh, S.B, Miesel, L, Lumb, K.J, Soisson, S.M. 登録日 2013-08-23 公開日 2013-10-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Structure of the Bacterial Deacetylase LpxC Bound to the Nucleotide Reaction Product Reveals Mechanisms of Oxyanion Stabilization and Proton Transfer. J.Biol.Chem., 288, 2013
6C5U	Aminoglycoside Phosphotransferase (2'')-Ia in complex with GMPPNP, Magnesium, and Ribostamycin, Alternate form 分子名称: Bifunctional AAC/APH, CHLORIDE ION, MAGNESIUM ION, ... 著者 Caldwell, S.J, Berghuis, A.M. 登録日 2018-01-16 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 Plasticity of Aminoglycoside Binding to Antibiotic Kinase APH(2′′)-Ia. Antimicrob. Agents Chemother., 62, 2018
7WI1	The mutant variant of PNGM-1, H93 was substituuted for alanine to study metal coordination 分子名称: Metallo-beta-lactamase PNGM-1, ZINC ION 著者 Park, Y.S, Kang, L.W, Lee, J.H. 登録日 2022-01-01 公開日 2023-01-18 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants. Int J Mol Sci, 21, 2020
6EJI	Structure of a glycosyltransferase 分子名称: CHLORIDE ION, GLYCEROL, POTASSIUM ION, ... 著者 Ramirez, A.S, Boilevin, J, Mehdipour, A.R, Hummer, G, Darbre, T, Reymond, J.L, Locher, K.P. 登録日 2017-09-21 公開日 2018-02-07 最終更新日 2018-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase. Nat Commun, 9, 2018
3SPH	Inward rectifier potassium channel Kir2.2 I223L mutant in complex with PIP2 分子名称: Inward-rectifier K+ channel Kir2.2, POTASSIUM ION, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate 著者 Hansen, S.B, Tao, X, MacKinnon, R. 登録日 2011-07-01 公開日 2011-08-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.003 Å) 主引用文献 Structural basis of PIP(2) activation of the classical inward rectifier K(+) channel Kir2.2. Nature, 477, 2011
3SZP	Full-length structure of the Vibrio cholerae virulence activator, AphB, a member of the LTTR protein family 分子名称: Transcriptional regulator, LysR family 著者 Taylor, J.L, De Silva, R.S, Kovacikova, G, Lin, W, Taylor, R.K, Skorupski, K, Kull, F.J. 登録日 2011-07-19 公開日 2011-11-23 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.202 Å) 主引用文献 The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH. Mol.Microbiol., 83, 2012
3SPC	Inward rectifier potassium channel Kir2.2 in complex with dioctanoylglycerol pyrophosphate (DGPP) 分子名称: (2R)-3-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}propane-1,2-diyl dioctanoate, Inward-rectifier K+ channel Kir2.2, POTASSIUM ION 著者 Hansen, S.B, Tao, X, MacKinnon, R. 登録日 2011-07-01 公開日 2011-08-24 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.454 Å) 主引用文献 Structural basis of PIP(2) activation of the classical inward rectifier K(+) channel Kir2.2. Nature, 477, 2011
2HF0	Bifidobacterium longum bile salt hydrolase 分子名称: Bile salt hydrolase 著者 Suresh, C.G, Kumar, R.S, Brannigan, J.A. 登録日 2006-06-22 公開日 2006-09-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and Functional Analysis of a Conjugated Bile Salt Hydrolase from Bifidobacterium longum Reveals an Evolutionary Relationship with Penicillin V Acylase. J.Biol.Chem., 281, 2006
6D9A	Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GalNAc (open, reduced) 分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, ISOPROPYL ALCOHOL, SODIUM ION, ... 著者 Wangkanont, K, Kiessling, L.L, Forest, K.T. 登録日 2018-04-28 公開日 2019-05-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Substrate recognition by FAD in UDP-galactopyranose mutase To be published
7XML	Cryo-EM structure of PEIP-Bs_enolase complex 分子名称: Enolase, MAGNESIUM ION, Putative gene 60 protein 著者 Li, S, Zhang, K. 登録日 2022-04-26 公開日 2022-07-27 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Bacteriophage protein PEIP is a potent Bacillus subtilis enolase inhibitor. Cell Rep, 40, 2022
7XQ3	Crystal structure of the tetramer of thioredoxin domain containing-protein of Oncomelania hupensis(OhTRP14) 分子名称: Thioredoxin domain-containing protein 17 著者 Wang, S.Q, Huang, S.Q. 登録日 2022-05-06 公開日 2022-10-12 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structural insights into the redox regulation of Oncomelania hupensis TRP14 and its potential role in the snail host response to parasite invasion. Fish Shellfish Immunol., 128, 2022
6D99	Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GalNAc (open, oxidized) 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, ISOPROPYL ALCOHOL, SODIUM ION, ... 著者 Wangkanont, K, Kiessling, L.L, Forest, K.T. 登録日 2018-04-28 公開日 2019-05-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Substrate recognition by FAD in UDP-galactopyranose mutase To be published
3TFC	1.95 Angstrom crystal structure of a bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase (aroA) from Listeria monocytogenes EGD-e in complex with phosphoenolpyruvate 分子名称: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, CHLORIDE ION, MANGANESE (II) ION, ... 著者 Light, S.H, Minasov, G, Halavaty, A.S, Shuvalova, L, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2011-08-15 公開日 2011-08-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural analysis of a 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with an N-terminal chorismate mutase-like regulatory domain. Protein Sci., 21, 2012
3U85	Crystal structure of human menin in complex with MLL1 分子名称: Histone-lysine N-methyltransferase 2A, Menin 著者 Huang, J, Wan, B, Lei, M. 登録日 2011-10-15 公開日 2012-02-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The same pocket in menin binds both MLL and JUND but has opposite effects on transcription. Nature, 482, 2012
3V1M	Crystal Structure of the S112A/H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, after exposure to its substrate HOPDA 分子名称: (3E)-2,6-DIOXO-6-PHENYLHEX-3-ENOATE, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONATE ION 著者 Ghosh, S, Bolin, J.T. 登録日 2011-12-09 公開日 2012-03-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad. J.Am.Chem.Soc., 134, 2012

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