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1HME
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STRUCTURE OF THE HMG BOX MOTIF IN THE B-DOMAIN OF HMG1
分子名称: HIGH MOBILITY GROUP PROTEIN FRAGMENT-B
著者Weir, H.M, Kraulis, P.J, Hill, C.S, Raine, A.R.C, Laue, E.D, Thomas, J.O.
登録日1994-02-10
公開日1994-05-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the HMG box motif in the B-domain of HMG1.
EMBO J., 12, 1993
5CKY
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BU of 5cky by Molmil
Crystal Structure of the MTERF1 R162A substitution bound to the termination sequence.
分子名称: 5' -D (*TP*AP*AP*GP*AP*TP*GP*GP*CP*AP*GP*AP*GP*CP*CP*CP*GP*GP*TP*AP*AP*T)-3', 5'-D(*AP*TP*TP*AP*CP*CP*GP*GP*GP*CP*TP*CP*TP*GP*CP*CP*AP*TP*CP*TP*TP*A)-3', Transcription termination factor 1, ...
著者Byrnes, J, Hauser, K, Norona, L, Mejia, E, Simmerling, C, Garcia-Diaz, M.
登録日2015-07-15
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Base Flipping by MTERF1 Can Accommodate Multiple Conformations and Occurs in a Stepwise Fashion.
J.Mol.Biol., 428, 2016
6YHZ
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UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain.
分子名称: Transcription-repair-coupling factor
著者Kawale, A.A, Burmann, B.B.
登録日2020-03-31
公開日2020-10-21
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain.
Commun Biol, 3, 2020
3FBL
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BU of 3fbl by Molmil
Crystal structure of ORF132 of the archaeal virus Acidianus Filamentous Virus 1 (AFV1)
分子名称: CHLORIDE ION, Putative uncharacterized protein
著者Goulet, A, Leulliot, N, Prangishvili, D, van Tilbeurgh, H, Campanacci, V, Cambillau, C.
登録日2008-11-19
公開日2009-11-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage
Proc.Natl.Acad.Sci.USA, 106, 2009
3FMY
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BU of 3fmy by Molmil
Structure of the C-terminal domain of the E. coli protein MQSA (YgiT/b3021)
分子名称: HTH-type transcriptional regulator MQSA (ygiT/b3021)
著者Page, R, Brown, B.L, Arruda, J.M, Peti, W.
登録日2008-12-22
公開日2010-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Three dimensional structure of the MqsR:MqsA complex: a novel TA pair comprised of a toxin homologous to RelE and an antitoxin with unique properties
Plos Pathog., 5, 2009
6TD3
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BU of 6td3 by Molmil
Structure of DDB1 bound to CR8-engaged CDK12-cyclinK
分子名称: (2R)-2-({9-(1-methylethyl)-6-[(4-pyridin-2-ylbenzyl)amino]-9H-purin-2-yl}amino)butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Bunker, R.D, Petzold, G, Kozicka, Z, Thoma, N.H.
登録日2019-11-07
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献The CDK inhibitor CR8 acts as a molecular glue degrader that depletes cyclin K.
Nature, 585, 2020
8OXP
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ATM(Q2971A) in complex with Mg AMP-PNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine-protein kinase ATM, ...
著者Howes, A.C, Perisic, O, Williams, R.L.
登録日2023-05-02
公開日2023-09-27
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural insights into the activation of ataxia-telangiectasia mutated by oxidative stress.
Sci Adv, 9, 2023
8OXQ
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ATM(Q2971A) dimeric C-terminal region in complex with Mg AMP-PNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine-protein kinase ATM, ...
著者Howes, A.C, Perisic, O, Williams, R.L.
登録日2023-05-02
公開日2023-09-27
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural insights into the activation of ataxia-telangiectasia mutated by oxidative stress.
Sci Adv, 9, 2023
8OXO
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BU of 8oxo by Molmil
ATM(Q2971A) dimeric C-terminal region activated by oxidative stress in complex with Mg AMP-PNP and p53 peptide
分子名称: Cellular tumor antigen p53, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Howes, A.C, Perisic, O, Williams, R.L.
登録日2023-05-02
公開日2023-09-27
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into the activation of ataxia-telangiectasia mutated by oxidative stress.
Sci Adv, 9, 2023
8OXM
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BU of 8oxm by Molmil
ATM(Q2971A) activated by oxidative stress in complex with Mg AMP-PNP and p53 peptide
分子名称: Cellular tumor antigen p53, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Howes, A.C, Perisic, O, Williams, R.L.
登録日2023-05-02
公開日2023-09-27
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into the activation of ataxia-telangiectasia mutated by oxidative stress.
Sci Adv, 9, 2023
1HMF
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BU of 1hmf by Molmil
STRUCTURE OF THE HMG BOX MOTIF IN THE B-DOMAIN OF HMG1
分子名称: HIGH MOBILITY GROUP PROTEIN FRAGMENT-B
著者Weir, H.M, Kraulis, P.J, Hill, C.S, Raine, A.R.C, Laue, E.D, Thomas, J.O.
登録日1994-03-07
公開日1994-05-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the HMG box motif in the B-domain of HMG1.
EMBO J., 12, 1993
1A0P
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BU of 1a0p by Molmil
SITE-SPECIFIC RECOMBINASE, XERD
分子名称: SITE-SPECIFIC RECOMBINASE XERD
著者Subramanya, H.S, Arciszewska, L.K, Baker, R.A, Bird, L.E, Sherratt, D.J, Wigley, D.B.
登録日1997-12-05
公開日1998-03-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the site-specific recombinase, XerD.
EMBO J., 16, 1997
5YUO
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BU of 5yuo by Molmil
Crystal structure of SSB protein from Pseudomonas aeruginosa PAO1
分子名称: GLYCEROL, Single-stranded DNA-binding protein
著者Huang, Y.H, Huang, C.Y.
登録日2017-11-22
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.037 Å)
主引用文献The glycine-rich flexible region in SSB is crucial for PriA stimulation.
RSC Adv., 8, 2018
2GIG
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BU of 2gig by Molmil
Alteration of sequence specificity of the type II restriction endonuclease HINCII through an indirect readout mechanism
分子名称: 5'-D(*GP*CP*CP*GP*GP*TP*CP*GP*AP*CP*CP*GP*GP*C)-3', SODIUM ION, Type II restriction enzyme HincII
著者Horton, N.C, Joshi, H.K, Etzkorn, C, Chatwell, L, Bitinaite, J.
登録日2006-03-28
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Alteration of Sequence Specificity of the Type II Restriction Endonuclease HincII through an Indirect Readout Mechanism.
J.Biol.Chem., 281, 2006
16VP
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BU of 16vp by Molmil
CONSERVED CORE OF THE HERPES SIMPLEX VIRUS TRANSCRIPTIONAL REGULATORY PROTEIN VP16
分子名称: PROTEIN (VP16, VMW65, ATIF), ...
著者Liu, Y, Gong, W, Huang, C.C, Herr, W, Cheng, X.
登録日1999-02-11
公開日1999-07-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the conserved core of the herpes simplex virus transcriptional regulatory protein VP16.
Genes Dev., 13, 1999
7UIC
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BU of 7uic by Molmil
Mediator-PIC Early (Tail A)
分子名称: Mediator of RNA polymerase II transcription subunit 14, Mediator of RNA polymerase II transcription subunit 15, Mediator of RNA polymerase II transcription subunit 16, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIL
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BU of 7uil by Molmil
Mediator-PIC Early (Tail A/B Dimer)
分子名称: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 14, Mediator of RNA polymerase II transcription subunit 15, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
1OY3
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BU of 1oy3 by Molmil
CRYSTAL STRUCTURE OF AN IKBBETA/NF-KB P65 HOMODIMER COMPLEX
分子名称: Transcription factor p65, transcription factor inhibitor I-kappa-B-beta
著者Malek, S, Huang, D.B, Huxford, T, Ghosh, S, Ghosh, G.
登録日2003-04-03
公開日2003-05-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献X-ray crystal structure of an IkappaBbeta x NF-kappaB p65 homodimer complex.
J.Biol.Chem., 278, 2003
3UMV
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BU of 3umv by Molmil
Eukaryotic Class II CPD photolyase structure reveals a basis for improved UV-tolerance in plants
分子名称: 1,2-ETHANEDIOL, Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Arvai, A.S, Hitomi, K, Getzoff, E.D, Tainer, J.A.
登録日2011-11-14
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.705 Å)
主引用文献Eukaryotic Class II Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals Basis for Improved Ultraviolet Tolerance in Plants.
J.Biol.Chem., 287, 2012
2X7V
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BU of 2x7v by Molmil
Crystal structure of Thermotoga maritima endonuclease IV in the presence of zinc
分子名称: PROBABLE ENDONUCLEASE 4, ZINC ION
著者Tomanicek, S.J, Hughes, R.C, Ng, J.D, Coates, L.
登録日2010-03-03
公開日2010-09-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Endonuclease Iv Homologue from Thermotoga Maritima in the Presence of Active-Site Divalent Metal Ions
Acta Crystallogr.,Sect.F, 66, 2010
3VH6
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BU of 3vh6 by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form II
分子名称: CENP-S, CENP-T, CENP-W, ...
著者Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
登録日2011-08-23
公開日2012-03-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.351 Å)
主引用文献CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold
Cell(Cambridge,Mass.), 148, 2012
7DVN
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BU of 7dvn by Molmil
Crystal structure of a MarR family protein in complex with a lipid-like effector molecule from the psychrophilic bacterium Paenisporosarcina sp. TG-14
分子名称: MarR family transcriptional regulator, PALMITIC ACID
著者Lee, C.W, Hwang, J, Do, H, Lee, J.H.
登録日2021-01-14
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a MarR family protein from the psychrophilic bacterium Paenisporosarcina sp. TG-14 in complex with a lipid-like molecule.
Iucrj, 8, 2021
1O57
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CRYSTAL STRUCTURE OF THE PURINE OPERON REPRESSOR OF BACILLUS SUBTILIS
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEXAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, ...
著者Sinha, S.C, Krahn, J, Shin, B.S, Tomchick, D.R, Zalkin, H, Smith, J.L.
登録日2003-04-20
公開日2003-08-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Purine Repressor of Bacillus Subtilis: A Novel Combination of Domains Adapted for Transcription Regulation
J.Bacteriol., 185, 2003
2KK0
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Solution structure of dead ringer-like protein 1 (at-rich interactive domain-containing protein 3a) from homo sapiens, northeast structural genomics consortium (NESG) target hr4394c
分子名称: AT-rich interactive domain-containing protein 3A
著者Liu, G, Wang, D, Nwosu, C, Owens, L, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2009-06-14
公開日2009-07-14
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of the ARID domain of human AT-rich interactive domain-containing protein 3A: a human cancer protein interaction network target.
Proteins, 78, 2010
1N03
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Model for Active RecA Filament
分子名称: ADENOSINE-5'-DIPHOSPHATE, RecA protein
著者VanLoock, M.S, Yu, X, Yang, S, Lai, A.L, Low, C, Campbell, M.J, Egelman, E.H.
登録日2002-10-10
公開日2003-02-25
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献ATP-Mediated Conformational Changes in the RecA Filament
Structure, 11, 2003

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