Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8AXR
DownloadVisualize
BU of 8axr by Molmil
Crystal structure of the C-terminal domain of human CFAP410
分子名称: CHLORIDE ION, Cilia- and flagella-associated protein 410
著者Dong, G, Stadler, A.
登録日2022-08-31
公開日2023-09-13
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The C-terminus of CFAP410 forms a tetrameric helical bundle that is essential for its localization to the basal body.
Open Biology, 14, 2024
8AXO
DownloadVisualize
BU of 8axo by Molmil
Crystal structure of the C-terminal domain of Trypanosoma brucei CFAP410
分子名称: TbCFAP410-CTD
著者Dong, G, Stadler, A.
登録日2022-08-31
公開日2023-09-13
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献The C-terminus of CFAP410 forms a tetrameric helical bundle that is essential for its localization to the basal body.
Open Biology, 14, 2024
7RFK
DownloadVisualize
BU of 7rfk by Molmil
CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor Sinefungin
分子名称: 1,2-ETHANEDIOL, DNA Strand 1, DNA Strand 2, ...
著者Horton, J.R, Cheng, X, Zhou, J.
登録日2021-07-14
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Repurposing epigenetic inhibitors to target the Clostridioides difficile- specific DNA adenine methyltransferase and sporulation regulator CamA.
Epigenetics, 17, 2022
7RFL
DownloadVisualize
BU of 7rfl by Molmil
CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor SGC0946
分子名称: 1,2-ETHANEDIOL, 5-bromo-7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine, DNA Strand 1, ...
著者Horton, J.R, Cheng, X, Zhou, J.
登録日2021-07-14
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Repurposing epigenetic inhibitors to target the Clostridioides difficile- specific DNA adenine methyltransferase and sporulation regulator CamA.
Epigenetics, 17, 2022
7RFM
DownloadVisualize
BU of 7rfm by Molmil
CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor EPZ004777
分子名称: 1,2-ETHANEDIOL, 7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine, DNA Strand 1, ...
著者Horton, J.R, Cheng, X, Zhou, J.
登録日2021-07-14
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Repurposing epigenetic inhibitors to target the Clostridioides difficile- specific DNA adenine methyltransferase and sporulation regulator CamA.
Epigenetics, 17, 2022
7RAH
DownloadVisualize
BU of 7rah by Molmil
Adenylate cyclase toxin RTX domain fragment bound to M1H5 Fab and M2B10 Fab
分子名称: Bifunctional adenylate cyclase toxin/hemolysin CyaA,Bifunctional adenylate cyclase toxin/hemolysin CyaA, CALCIUM ION, M1H5 Fab Heavy Chain, ...
著者Goldsmith, J.A, McLellan, J.S.
登録日2021-07-01
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for antibody binding to adenylate cyclase toxin reveals RTX linkers as neutralization-sensitive epitopes.
Plos Pathog., 17, 2021
8B1S
DownloadVisualize
BU of 8b1s by Molmil
co-crystal of SUDV VP40 with salicylic acid
分子名称: 2-HYDROXYBENZOIC ACID, Matrix protein VP40
著者Werner, A.-D, Krapoth, N, Norris, M.J, Heine, A, Klebe, G, Ollmann Saphire, E, Becker, S.
登録日2022-09-12
公開日2023-09-27
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of a Crystallographic Screening to Identify Sudan Virus VP40 Ligands.
Acs Omega, 9, 2024
7RFN
DownloadVisualize
BU of 7rfn by Molmil
CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor SGC8158
分子名称: 1,2-ETHANEDIOL, 5'-S-(4-{[(4'-chloro[1,1'-biphenyl]-3-yl)methyl]amino}butyl)-5'-thioadenosine, DNA Strand 1, ...
著者Horton, J.R, Cheng, X, Zhou, J.
登録日2021-07-14
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Repurposing epigenetic inhibitors to target the Clostridioides difficile- specific DNA adenine methyltransferase and sporulation regulator CamA.
Epigenetics, 17, 2022
8ANT
DownloadVisualize
BU of 8ant by Molmil
Crystal structure of 6xhis-tagged phi3T_93 protein
分子名称: YopN, Phi3T_93
著者Zamora-Caballero, S, Marina, A.
登録日2022-08-05
公開日2023-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision.
Nat Microbiol, 9, 2024
8ANV
DownloadVisualize
BU of 8anv by Molmil
Crystal structure of phi3T_93 and phi3T AimX complex
分子名称: Arbitrium putative lysogeny regulator, CALCIUM ION, NICKEL (II) ION, ...
著者Zamora-Caballero, S, Marina, A.
登録日2022-08-05
公開日2023-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision.
Nat Microbiol, 9, 2024
8EBO
DownloadVisualize
BU of 8ebo by Molmil
Homopurine parallel G-quadruplex from human chromosome 7 stabilized by K+ ions
分子名称: COBALT (III) ION, DNA (5'-D(*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*AP*AP*AP*GP*GP*GP*GP*A)-3'), N-METHYLMESOPORPHYRIN, ...
著者Chen, E.V, Yatsunyk, L.A.
登録日2022-08-31
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Homopurine guanine-rich sequences in complex with N-methyl mesoporphyrin IX form parallel G-quadruplex dimers and display a unique symmetry tetrad.
Bioorg.Med.Chem., 77, 2022
1DGZ
DownloadVisualize
BU of 1dgz by Molmil
RIBOSMAL PROTEIN L36 FROM THERMUS THERMOPHILUS: NMR STRUCTURE ENSEMBLE
分子名称: PROTEIN (L36 RIBOSOMAL PROTEIN), ZINC ION
著者Hard, T, Rak, A, Allard, P, Kloo, L, Garber, M.
登録日1999-11-27
公開日1999-12-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure of ribosomal protein L36 from Thermus thermophilus reveals a zinc-ribbon-like fold.
J.Mol.Biol., 296, 2000
8E9F
DownloadVisualize
BU of 8e9f by Molmil
WD repeat-containing protein 5 complexed with 4-(7-((1H-imidazol-1-yl)methyl)-5-(1-methyl-3-(trifluoromethyl)-1H-pyrazol-4-yl)-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)-6-ethyl-N-methylquinoline-8-carboxamide (compound 10)
分子名称: 6-ethyl-4-[(5P)-7-[(1H-imidazol-1-yl)methyl]-5-[1-methyl-3-(trifluoromethyl)-1H-pyrazol-4-yl]-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl]-N-methylquinoline-8-carboxamide, BENZAMIDINE, WD repeat-containing protein 5
著者Rietz, T.A, Fesik, S.W.
登録日2022-08-26
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure-based discovery of potent WD repeat domain 5 inhibitors that demonstrate efficacy and safety in preclinical animal models.
Proc.Natl.Acad.Sci.USA, 120, 2023
8QRF
DownloadVisualize
BU of 8qrf by Molmil
SARS-CoV-2 delta RBD complexed with XBB-6 and beta-49 Fabs
分子名称: Beta-49 heavy chain, Beta-49 light chain, Spike protein S1, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2023-10-06
公開日2024-05-08
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献A structure-function analysis shows SARS-CoV-2 BA.2.86 balances antibody escape and ACE2 affinity.
Cell Rep Med, 5, 2024
8B22
DownloadVisualize
BU of 8b22 by Molmil
Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 300-seconds post reaction initiation with Na+
分子名称: DIPHOSPHATE, K(+)-stimulated pyrophosphate-energized sodium pump, MAGNESIUM ION
著者Strauss, J, Vidilaseris, K, Goldman, A.
登録日2022-09-12
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (3.98 Å)
主引用文献Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases.
Embo Rep., 25, 2024
8DQP
DownloadVisualize
BU of 8dqp by Molmil
Crystal structure of Arabidopsis thaliana COSY in complex with scopoletin
分子名称: 1,2-ETHANEDIOL, 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one, ACETATE ION, ...
著者Kim, C.Y, Mitchell, A.J, Gutierrez, M, Weng, J.K.
登録日2022-07-19
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Nat Commun, 14, 2023
8B23
DownloadVisualize
BU of 8b23 by Molmil
Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 600-seconds post reaction initiation with Na+
分子名称: DIPHOSPHATE, K(+)-stimulated pyrophosphate-energized sodium pump, MAGNESIUM ION
著者Strauss, J, Vidilaseris, K, Goldman, A.
登録日2022-09-12
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (3.84 Å)
主引用文献Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases.
Embo Rep., 25, 2024
8B21
DownloadVisualize
BU of 8b21 by Molmil
Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 0-60-seconds post reaction initiation with Na+
分子名称: DI(HYDROXYETHYL)ETHER, DODECYL-BETA-D-MALTOSIDE, K(+)-stimulated pyrophosphate-energized sodium pump, ...
著者Strauss, J, Vidilaseris, K, Goldman, A.
登録日2022-09-12
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases.
Embo Rep., 25, 2024
8DV6
DownloadVisualize
BU of 8dv6 by Molmil
Zika virus envelope protein structure in complex with a potent Human mAb
分子名称: Envelope protein E, mAb Fab Heavy Chain, mAb Fab Light Chain
著者Cameron, A, Puhl, A.C, deSilva, A.M, Premkumar, L.
登録日2022-07-28
公開日2023-01-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.38 Å)
主引用文献Structure and neutralization mechanism of a human antibody targeting a complex Epitope on Zika virus.
Plos Pathog., 19, 2023
8GNA
DownloadVisualize
BU of 8gna by Molmil
Structure of the SbCas7-11-crRNA-NTR complex
分子名称: RAMP superfamily protein, RNA (32-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*GP*U)-3'), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-08-23
公開日2023-01-18
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Target RNA-guided protease activity in type III-E CRISPR-Cas system.
Nucleic Acids Res., 50, 2022
8GU6
DownloadVisualize
BU of 8gu6 by Molmil
Structure of the SbCas7-11-crRNA-NTR-Csx29 complex
分子名称: CHAT domain protein, RAMP superfamily protein, RNA (33-MER), ...
著者Yu, G, Wang, X, Deng, Z, Zhang, H.
登録日2022-09-10
公開日2023-01-18
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Target RNA-guided protease activity in type III-E CRISPR-Cas system.
Nucleic Acids Res., 50, 2022
8DQQ
DownloadVisualize
BU of 8dqq by Molmil
Crystal structure of Arabidopsis thaliana COSY in complex with scopoletin
分子名称: 7-hydroxy-2H-chromen-2-one, ACETATE ION, CALCIUM ION, ...
著者Kim, C.Y, Mitchell, A.J, Gutierrez, M, Weng, J.K.
登録日2022-07-19
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Nat Commun, 14, 2023
8B24
DownloadVisualize
BU of 8b24 by Molmil
Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 3600-seconds post reaction initiation with Na+
分子名称: DIPHOSPHATE, K(+)-stimulated pyrophosphate-energized sodium pump, MAGNESIUM ION, ...
著者Strauss, J, Vidilaseris, K, Goldman, A.
登録日2022-09-12
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (4.53 Å)
主引用文献Functional and structural asymmetry suggest a unifying principle for catalysis in membrane-bound pyrophosphatases.
Embo Rep., 25, 2024
7R96
DownloadVisualize
BU of 7r96 by Molmil
Self-Assembled 3D DNA Hexagonal Tensegrity Triangle
分子名称: DNA (5'-D(*AP*GP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), ...
著者Lu, B, Vecchioni, S, Ohayon, Y.P, Sha, R, Mao, C, Seeman, N.C.
登録日2021-06-28
公開日2021-10-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (5.68 Å)
主引用文献3D Hexagonal Arrangement of DNA Tensegrity Triangles.
Acs Nano, 15, 2021
8EAZ
DownloadVisualize
BU of 8eaz by Molmil
HOIL-1/E2-Ub/Ub transthiolation complex
分子名称: RanBP-type and C3HC4-type zinc finger-containing protein 1, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
著者Wang, X.S, Cotton, T.R, Lechtenberg, B.C.
登録日2022-08-30
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献The unifying catalytic mechanism of the RING-between-RING E3 ubiquitin ligase family.
Nat Commun, 14, 2023

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon