PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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3D5O	Structural recognition and functional activation of FcrR by innate pentraxins 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Low affinity immunoglobulin gamma Fc region receptor II-a, ... 著者 Lu, J, Marnell, L.L, Marjon, K.D, Mold, C, Du Clos, T.W, Sun, P.D. 登録日 2008-05-16 公開日 2008-11-11 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural recognition and functional activation of FcgammaR by innate pentraxins. Nature, 456, 2008
4FP1	P. putida mandelate racemase co-crystallized with 3,3,3-trifluoro-2-hydroxy-2-(trifluoromethyl) propionic acid 分子名称: 3,3,3-trifluoro-2-hydroxy-2-(trifluoromethyl)propanoic acid, MAGNESIUM ION, Mandelate racemase 著者 Lietzan, A.D, St.Maurice, M. 登録日 2012-06-21 公開日 2013-06-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Potent inhibition of mandelate racemase by a fluorinated substrate-product analogue with a novel binding mode. Biochemistry, 53, 2014
3D5X	Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with wortmannin. 分子名称: (1S,6BR,9AS,11R,11BR)-9A,11B-DIMETHYL-1-[(METHYLOXY)METHYL]-3,6,9-TRIOXO-1,6,6B,7,8,9,9A,10,11,11B-DECAHYDRO-3H-FURO[4, 3,2-DE]INDENO[4,5-H][2]BENZOPYRAN-11-YL ACETATE, Polo-like kinase 1 著者 Elling, R.A, Fucini, R.V, Romanowski, M.J. 登録日 2008-05-17 公開日 2008-08-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structures of the wild-type and activated catalytic domains of Brachydanio rerio Polo-like kinase 1 (Plk1): changes in the active-site conformation and interactions with ligands. Acta Crystallogr.,Sect.D, 64, 2008
4FMO	Structure of the C-terminal domain of the Saccharomyces cerevisiae MUTL alpha (MLH1/PMS1) heterodimer bound to a fragment of exo1 分子名称: DNA mismatch repair protein MLH1, DNA mismatch repair protein PMS1, DNA repair peptide, ... 著者 Gueneau, E, Legrand, P, Charbonnier, J.B. 登録日 2012-06-18 公開日 2013-02-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.04 Å) 主引用文献 Structure of the MutL alpha C-terminal domain reveals how Mlh1 contributes to Pms1 endonuclease site. Nat.Struct.Mol.Biol., 20, 2013
3D68	Crystal structure of a T325I/T329I/H333Y/H335Q mutant of Thrombin-Activatable Fibrinolysis Inhibitor (TAFI-IIYQ) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ARGININE, Carboxypeptidase B2, ... 著者 Brondijk, T.H.C, Huizinga, E.G. 登録日 2008-05-19 公開日 2008-07-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structures of TAFI elucidate the inactivation mechanism of activated TAFI: a novel mechanism for enzyme autoregulation Blood, 112, 2008
3D72	1.65 Angstrom crystal structure of the Cys71Val variant in the fungal photoreceptor VVD 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Vivid PAS protein VVD 著者 Zoltowski, B.D, Crane, B.R. 登録日 2008-05-20 公開日 2008-06-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Light activation of the LOV protein vivid generates a rapidly exchanging dimer. Biochemistry, 47, 2008
3D3Y	Crystal structure of a conserved protein from Enterococcus faecalis V583 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Uncharacterized protein 著者 Tan, K, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-05-13 公開日 2008-07-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 The crystal structure of a conserved protein from Enterococcus faecalis V583. To be Published
3D7K	Crystal structure of benzaldehyde lyase in complex with the inhibitor MBP 分子名称: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(S)-hydroxy[(R)-hydroxy(methoxy)phosphoryl]phenylmethyl}-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, Benzaldehyde lyase, CALCIUM ION 著者 Brandt, G.S. 登録日 2008-05-21 公開日 2008-07-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Probing the active center of benzaldehyde lyase with substitutions and the pseudosubstrate analogue benzoylphosphonic acid methyl ester Biochemistry, 47, 2008
4FQA	Crystal structure of toxic effector Tse1 分子名称: toxic effector Tse1 著者 Li, L, Zhang, W, Wang, T. 登録日 2012-06-25 公開日 2013-06-26 最終更新日 2018-03-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural insight on toxic effector Tse1 To be Published
3VNP	Crystal structure of hypothetical protein (GK2848) from Geobacillus Kaustophilus 分子名称: ACETIC ACID, Hypothetical conserved protein, MAGNESIUM ION 著者 Karthe, P.P, Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2012-01-17 公開日 2012-03-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of hypothetical protein (GK2848) from Geobacillus Kaustophilus To be Published
4FNI	Crystal structure of IsdI-W66Y in complex with heme and cyanide 分子名称: CYANIDE ION, Heme-degrading monooxygenase isdI, MAGNESIUM ION, ... 著者 Ukpabi, G.N, Murphy, M.E.P. 登録日 2012-06-19 公開日 2012-08-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Inactivation of the heme degrading enzyme IsdI by an active site substitution that diminishes heme ruffling. J.Biol.Chem., 287, 2012
4FNS	Crystal structure of GH36 alpha-galactosidase AgaA A355E from Geobacillus stearothermophilus in complex with 1-deoxygalactonojirimycin 分子名称: (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol, 1,2-ETHANEDIOL, Alpha-galactosidase AgaA, ... 著者 Merceron, R, Foucault, M, Haser, R, Mattes, R, Watzlawick, H, Gouet, P. 登録日 2012-06-20 公開日 2012-10-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The molecular mechanism of the thermostable alpha-galactosidases AgaA and AgaB explained by X-ray crystallography and mutational studies J.Biol.Chem., 287, 2012
3D59	Crystal structure of human plasma platelet activating factor acetylhydrolase 分子名称: ACETATE ION, Platelet-activating factor acetylhydrolase, SULFATE ION 著者 Samanta, U, Bahnson, B.J. 登録日 2008-05-16 公開日 2008-09-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal Structure of Human Plasma Platelet-activating Factor Acetylhydrolase: STRUCTURAL IMPLICATION TO LIPOPROTEIN BINDING AND CATALYSIS. J.Biol.Chem., 283, 2008
3CEZ	Crystal structure of methionine-R-sulfoxide reductase from Burkholderia pseudomallei 分子名称: ACETIC ACID, Methionine-R-sulfoxide reductase, ZINC ION 著者 Staker, B, Napuli, A, Nakazawa, S.H, Castaneda, L, Alkafeef, S, Vanvoorhis, W, Stewart, L, Myler, P, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2008-02-29 公開日 2008-03-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Methionine-R-sulfoxide reductase from Burkholderia pseudomallei. To be Published
4FQU	Glutathionyl-Hydroquinone Reductase PcpF of Sphingobium chlorophenolicum 分子名称: Putative glutathione transferase 著者 Green, A.R, Hayes, R.P, Xun, L, Kang, C. 登録日 2012-06-25 公開日 2012-09-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural understanding of the glutathione-dependent reduction mechanism of glutathionyl-hydroquinone reductases. J.Biol.Chem., 287, 2012
3D6J	Crystal structure of Putative haloacid dehalogenase-like hydrolase from Bacteroides fragilis 分子名称: GLYCEROL, PHOSPHATE ION, Putative haloacid dehalogenase-like hydrolase 著者 Chang, C, Wu, R, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-05-19 公開日 2008-07-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of Putative haloacid dehalogenase-like hydrolase from Bacteroides fragilis To be Published
4FP8	Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin, HA1 subunit 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody C05, ... 著者 Ekiert, D.C, Wilson, I.A. 登録日 2012-06-21 公開日 2012-09-19 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.947 Å) 主引用文献 Cross-neutralization of influenza A viruses mediated by a single antibody loop. Nature, 489, 2012
3D6N	Crystal Structure of Aquifex Dihydroorotase Activated by Aspartate Transcarbamoylase 分子名称: Aspartate carbamoyltransferase, CITRATE ANION, Dihydroorotase, ... 著者 Edwards, B.F.P. 登録日 2008-05-20 公開日 2009-01-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Dihydroorotase from the hyperthermophile Aquifiex aeolicus is activated by stoichiometric association with aspartate transcarbamoylase and forms a one-pot reactor for pyrimidine biosynthesis. Biochemistry, 48, 2009
4FR0	ArsM arsenic(III) S-adenosylmethionine methyltransferase with SAM 分子名称: Arsenic methyltransferase, S-ADENOSYLMETHIONINE 著者 Ajees, A.A, Marapakala, K, Packianathan, C, Sankaran, B, Rosen, B.P. 登録日 2012-06-26 公開日 2012-07-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structure of an As(III) S-Adenosylmethionine Methyltransferase: Insights into the Mechanism of Arsenic Biotransformation. Biochemistry, 51, 2012
4FHI	Development of synthetically accessible non-secosteroidal hybrid molecules combining vitamin D receptor agonism and histone deacetylase inhibition 分子名称: N-hydroxy-2-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}acetamide, SRC-1, Vitamin Nuclear Receptor 著者 Fischer, J, Wang, T.T, Kaldre, D, Rochel, N, Moras, D, White, J.H, Gleason, J.L. 登録日 2012-06-06 公開日 2012-09-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Synthetically accessible non-secosteroidal hybrid molecules combining vitamin d receptor agonism and histone deacetylase inhibition. Chem.Biol., 19, 2012
3CFE	Crystal structure of purple-fluorescent antibody EP2-25C10 分子名称: GLYCEROL, PURPLE-FLUORESCENT ANTIBODY EP2-25C10-IGG2B HEAVY CHAIN, PURPLE-FLUORESCENT ANTIBODY EP2-25C10-KAPPA LIGHT CHAIN, ... 著者 Debler, E.W, Heine, A, Wilson, I.A. 登録日 2008-03-03 公開日 2008-03-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.99 Å) 主引用文献 Deeply inverted electron-hole recombination in a luminescent antibody-stilbene complex. Science, 319, 2008
3D75	Crystal structure of a pheromone binding protein mutant D35N, from Apis mellifera, at pH 5.5 分子名称: N-BUTYL-BENZENESULFONAMIDE, Pheromone-binding protein ASP1 著者 Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C. 登録日 2008-05-20 公開日 2009-05-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release J.Mol.Biol., 390, 2009
4FHP	Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - CaUTP bound 分子名称: CALCIUM ION, GLYCEROL, Poly(A) RNA polymerase protein cid1, ... 著者 Lunde, B.M, Magler, I, Meinhart, A. 登録日 2012-06-06 公開日 2012-08-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity. Nucleic Acids Res., 40, 2012
3CFP	Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 1 分子名称: CALCIUM ION, CHLORIDE ION, DNA (5'-D(*DAP*DCP*DAP*DGP*DGP*DTP*DAP*DAP*DGP*DCP*DAP*DGP*DTP*DCP*DCP*DGP*DCP*DG)-3'), ... 著者 Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H. 登録日 2008-03-04 公開日 2009-03-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant To be Published
3CGE	Pyridine Nucleotide Complexes with Bacillus anthracis Coenzyme A-Disulfide Reductase: A Structural Analysis of Dual NAD(P)H Specificity 分子名称: COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Wallen, J.R. 登録日 2008-03-05 公開日 2008-04-22 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.262 Å) 主引用文献 Pyridine Nucleotide Complexes with Bacillus anthracis Coenzyme A-Disulfide Reductase: A Structural Analysis of Dual NAD(P)H Specificity. Biochemistry, 47, 2008

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