PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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5URI	Rat CYPOR/D632A with 2'-AMP 分子名称: ADENOSINE-2'-MONOPHOSPHATE, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Xia, C, Kim, J.J. 登録日 2017-02-10 公開日 2018-02-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and Kinetic Studies of Asp632 Mutants and Fully Reduced NADPH-Cytochrome P450 Oxidoreductase Define the Role of Asp632 Loop Dynamics in the Control of NADPH Binding and Hydride Transfer. Biochemistry, 57, 2018
3GC4	tRNA-guanine transglycosylase in complex with inhibitor 分子名称: 6-amino-4-[2-(benzylamino)ethyl]-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ... 著者 Ritschel, T, Heine, A, Klebe, G. 登録日 2009-02-21 公開日 2009-12-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 How to Replace the Residual Solvation Shell of Polar Active Site Residues to Achieve Nanomolar Inhibition of tRNA-Guanine Transglycosylase Chemmedchem, 4, 2009
3SJQ	Crystal structure of a small conductance potassium channel splice variant complexed with calcium-calmodulin 分子名称: 1-phenylurea, CALCIUM ION, Calmodulin, ... 著者 Zhang, M, Pascal, J.M, Zhang, J.-F. 登録日 2011-06-21 公開日 2012-05-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for calmodulin as a dynamic calcium sensor. Structure, 20, 2012
2C9F	THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON DODECAHEDRON 分子名称: FIBER, PENTON PROTEIN 著者 Fuschiotti, P, Schoehn, G, Fender, P, Fabry, C.M.S, Hewat, E.A, Chroboczek, J, Ruigrok, R.W.H, Conway, J.F. 登録日 2005-12-12 公開日 2006-03-02 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (16.5 Å) 主引用文献 Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3. J.Mol.Biol., 356, 2006
3RV0	Crystal structure of K. polysporus Dcr1 without the C-terminal dsRBD 分子名称: K. polysporus Dcr1, MAGNESIUM ION 著者 Nakanishi, K, Weinberg, D.E, Bartel, D.P, Patel, D.J. 登録日 2011-05-05 公開日 2011-08-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 The inside-out mechanism of dicers from budding yeasts. Cell(Cambridge,Mass.), 146, 2011
4DIA	CRYSTAL STRUCTURE OF THE D248N mutant of 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE FROM SPHINGOMONAS PAUCIMOBILIS complexed with substrate at pH 4.6 分子名称: 2-pyrone-4,6-dicarbaxylate hydrolase 著者 Malashkevich, V.N, Toro, R, Hobbs, M.E, Raushel, F.M, Almo, S.C. 登録日 2012-01-11 公開日 2012-10-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and Catalytic Mechanism of LigI: Insight into the Amidohydrolase Enzymes of cog3618 and Lignin Degradation. Biochemistry, 51, 2012
3GC5	tRNA-guanine transglycosylase in complex with 6-amino-4-(2-aminoethyl)-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one 分子名称: 6-amino-4-(2-aminoethyl)-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ... 著者 Ritschel, T, Heine, A, Klebe, G. 登録日 2009-02-21 公開日 2009-12-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 How to Replace the Residual Solvation Shell of Polar Active Site Residues to Achieve Nanomolar Inhibition of tRNA-Guanine Transglycosylase Chemmedchem, 4, 2009
1XFU	Crystal structure of anthrax edema factor (EF) truncation mutant, EF-delta 64 in complex with calmodulin 分子名称: CALCIUM ION, Calmodulin 2, Calmodulin-sensitive adenylate cyclase, ... 著者 Shen, Y, Zhukovskaya, N.L, Guo, Q, Florian, J, Tang, W.J. 登録日 2004-09-15 公開日 2005-05-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Calcium-independent calmodulin binding and two-metal-ion catalytic mechanism of anthrax edema factor. EMBO J., 24, 2005
4NJG	Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet and 6-carboxypterin 分子名称: 6-CARBOXYPTERIN, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ... 著者 Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L. 登録日 2013-11-10 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.598 Å) 主引用文献 Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism. Nat.Chem.Biol., 10, 2014
1NOE	NMR STUDY OF REDUCED HIGH POTENTIAL IRON SULFUR PROTEIN 分子名称: HIGH POTENTIAL IRON SULFUR PROTEIN, IRON/SULFUR CLUSTER 著者 Bentrop, D, Bertini, I, Capozzi, F, Dikiy, A, Eltis, L, Luchinat, C. 登録日 1996-01-07 公開日 1996-06-10 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Three-dimensional structure of the reduced C77S mutant of the Chromatium vinosum high-potential iron-sulfur protein through nuclear magnetic resonance: comparison with the solution structure of the wild-type protein. Biochemistry, 35, 1996
5DBR	Ca2+ CaM with human cardiac Na+ channel (NaV1.5) inactivation gate 分子名称: CALCIUM ION, Calmodulin, Sodium channel protein type 5 subunit alpha 著者 Johnson, C.N, Thompson, M.K, Chazin, W.J. 登録日 2015-08-21 公開日 2017-02-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Enhanced Understanding of Ca2+ Modulation of the Human Cardiac Sodium Channel: Tight Binding of Calmodulin to the Inactivation Gate To Be Published
2EB1	Crystal Structure of the C-Terminal RNase III Domain of Human Dicer 分子名称: Endoribonuclease Dicer, MAGNESIUM ION 著者 Takeshita, D, Zenno, S, Lee, W.C, Nagata, K, Saigo, K, Tanokura, M. 登録日 2007-02-05 公開日 2007-11-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Homodimeric Structure and Double-stranded RNA Cleavage Activity of the C-terminal RNase III Domain of Human Dicer J.Mol.Biol., 374, 2007
4DI9	CRYSTAL STRUCTURE OF THE D248A mutant of 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE FROM SPHINGOMONAS PAUCIMOBILIS complexed with substrate at pH 6.5 分子名称: (1E,3Z)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylic acid, 2-pyrone-4,6-dicarbaxylate hydrolase, ACETATE ION 著者 Malashkevich, V.N, Toro, R, Hobbs, M.E, Raushel, F.M, Almo, S.C. 登録日 2012-01-11 公開日 2012-10-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structure and Catalytic Mechanism of LigI: Insight into the Amidohydrolase Enzymes of cog3618 and Lignin Degradation. Biochemistry, 51, 2012
3DVE	Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain complex 分子名称: CALCIUM ION, Calmodulin, NICKEL (II) ION, ... 著者 Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L. 登録日 2008-07-18 公開日 2008-11-04 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation. Structure, 16, 2008
3DVM	Crystal Structure of Ca2+/CaM-CaV2.1 IQ domain complex 分子名称: CALCIUM ION, Calmodulin, Voltage-dependent P/Q-type calcium channel subunit alpha-1A 著者 Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L. 登録日 2008-07-18 公開日 2008-11-04 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation. Structure, 16, 2008
5CT3	The structure of the NK1 fragment of HGF/SF complexed with 2FA 分子名称: 3-hydroxypropane-1-sulfonic acid, Hepatocyte growth factor 著者 Sigurdardottir, A.G, Winter, A, Sobkowicz, A, Fragai, M, Chirgadze, D.Y, Ascher, D.B, Blundell, T.L, Gherardi, E. 登録日 2015-07-23 公開日 2015-08-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Exploring the chemical space of the lysine-binding pocket of the first kringle domain of hepatocyte growth factor/scatter factor (HGF/SF) yields a new class of inhibitors of HGF/SF-MET binding. Chem Sci, 6, 2015
3DVK	Crystal Structure of Ca2+/CaM-CaV2.3 IQ domain complex 分子名称: CALCIUM ION, Calmodulin, Voltage-dependent R-type calcium channel subunit alpha-1E 著者 Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L. 登録日 2008-07-18 公開日 2008-11-04 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation. Structure, 16, 2008
5URE	Wild type rat CYPOR bound with NADP+ - reduced form 分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Xia, C, Kim, J.J. 登録日 2017-02-10 公開日 2018-02-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and Kinetic Studies of Asp632 Mutants and Fully Reduced NADPH-Cytochrome P450 Oxidoreductase Define the Role of Asp632 Loop Dynamics in the Control of NADPH Binding and Hydride Transfer. Biochemistry, 57, 2018
5URD	wild type rat CYPOR bound with NADP+ - oxidized form 分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Xia, C, Kim, J.J. 登録日 2017-02-10 公開日 2018-02-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and Kinetic Studies of Asp632 Mutants and Fully Reduced NADPH-Cytochrome P450 Oxidoreductase Define the Role of Asp632 Loop Dynamics in the Control of NADPH Binding and Hydride Transfer. Biochemistry, 57, 2018
5D48	Crystal Structure of FABP4 in complex with 3-{5-cyclopropyl-3-(3,5-dimethyl-1H-pyrazol-4-yl)-2-[3-(propan-2-yloxy) phenyl]-1H-indol-1-yl}propanoic acid 分子名称: 3-{5-cyclopropyl-3-(3,5-dimethyl-1H-pyrazol-4-yl)-2-[3-(propan-2-yloxy)phenyl]-1H-indol-1-yl}propanoic acid, Fatty acid-binding protein, adipocyte, ... 著者 Tagami, U, Takahashi, K, Igarashi, S, Ejima, C, Yoshida, T, Takeshita, S, Miyanaga, W, Sugiki, M, Tokumasu, M, Hatanaka, T, Kashiwagi, T, Ishikawa, K, Miyano, H, Mizukoshi, T. 登録日 2015-08-07 公開日 2016-06-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Interaction Analysis of FABP4 Inhibitors by X-ray Crystallography and Fragment Molecular Orbital Analysis Acs Med.Chem.Lett., 7, 2016
5UU5	Bacteriophage P22 mature virion capsid protein 分子名称: Major capsid protein 著者 Hryc, C.F, Chen, D.-H, Afonine, P.V, Jakana, J, Wang, Z, Haase-Pettingell, C, Jiang, W, Adams, P.D, King, J.A, Schmid, M.F, Chiu, W. 登録日 2017-02-16 公開日 2017-03-15 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Accurate model annotation of a near-atomic resolution cryo-EM map. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3RV1	Crystal structure of the N-terminal and RNase III domains of K. polysporus Dcr1 E224Q mutant 分子名称: K. polysporus Dcr1 著者 Nakanishi, K, Weinberg, D.E, Bartel, D.P, Patel, D.J. 登録日 2011-05-05 公開日 2011-08-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.975 Å) 主引用文献 The inside-out mechanism of dicers from budding yeasts. Cell(Cambridge,Mass.), 146, 2011
3DX7	Crystal Structure of HLA-B*4403 presenting 10mer EBV antigen 分子名称: ACETATE ION, Beta-2-microglobulin, EBV decapeptide epitope, ... 著者 Archbold, J.K, Ely, L.K, Rossjohn, J. 登録日 2008-07-23 公開日 2009-01-27 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition. J.Exp.Med., 206, 2009
1XFY	Crystal structure of anthrax edema factor (EF) in complex with calmodulin 分子名称: CALCIUM ION, Calmodulin 2, Calmodulin-sensitive adenylate cyclase, ... 著者 Shen, Y, Zhukovskaya, N.L, Guo, Q, Florian, J, Tang, W.J. 登録日 2004-09-15 公開日 2005-05-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Calcium-independent calmodulin binding and two-metal-ion catalytic mechanism of anthrax edema factor. EMBO J., 24, 2005
151L	CONSERVATION OF SOLVENT-BINDING SITES IN 10 CRYSTAL FORMS OF T4 LYSOZYME 分子名称: PHOSPHATE ION, T4 LYSOZYME 著者 Zhang, X.-J, Matthews, B.W. 登録日 1994-01-25 公開日 1994-04-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci., 3, 1994

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