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5M6F
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Small Molecule inhibitors of IAP
分子名称: 1-[3,3-dimethyl-6-(phenylmethyl)-2~{H}-pyrrolo[3,2-b]pyridin-1-yl]-2-[(2~{R},5~{R})-2-(methoxymethyl)-5-methyl-piperazin-4-ium-1-yl]ethanone, E3 ubiquitin-protein ligase XIAP, SODIUM ION, ...
著者Williams, P.A.
登録日2016-10-25
公開日2017-05-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Discovery of a Potent Nonpeptidomimetic, Small-Molecule Antagonist of Cellular Inhibitor of Apoptosis Protein 1 (cIAP1) and X-Linked Inhibitor of Apoptosis Protein (XIAP).
J. Med. Chem., 60, 2017
5WC2
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BU of 5wc2 by Molmil
Crystal Structure of ADP-bound human TRIP13
分子名称: ADENOSINE-5'-DIPHOSPHATE, Pachytene checkpoint protein 2 homolog
著者Jeong, B.-C, Luo, X.
登録日2017-06-29
公開日2018-04-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanistic insight into TRIP13-catalyzed Mad2 structural transition and spindle checkpoint silencing.
Nat Commun, 8, 2017
5MVL
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BU of 5mvl by Molmil
Crystal structure of an A-DNA dodecamer containing 5-bromouracil
分子名称: Brominated DNA dodecamer, MAGNESIUM ION
著者Hardwick, J.S, Ptchelkine, D, Phillips, S.E.V, Brown, T.
登録日2017-01-16
公開日2017-05-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.405 Å)
主引用文献5-Formylcytosine does not change the global structure of DNA.
Nat. Struct. Mol. Biol., 24, 2017
5WL3
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BU of 5wl3 by Molmil
Crystal structure of chalcone isomerase engineered from ancestral inference (ancR2)
分子名称: CHLORIDE ION, Engineered Chalcone Isomerase ancR2
著者Burke, J.R, Kaltenbach, M, Tawfik, D.S, Noel, J.P.
登録日2017-07-25
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Evolution of chalcone isomerase from a noncatalytic ancestor.
Nat. Chem. Biol., 14, 2018
5M6H
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BU of 5m6h by Molmil
Small Molecule inhibitors of IAP
分子名称: 1-[3,3-dimethyl-6-(phenylmethyl)-2~{H}-pyrrolo[3,2-b]pyridin-1-yl]-2-[(2~{R},5~{R})-5-methyl-2-morpholin-4-ylcarbonyl-piperazin-4-ium-1-yl]ethanone, E3 ubiquitin-protein ligase XIAP, SODIUM ION, ...
著者Williams, P.A.
登録日2016-10-25
公開日2017-05-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of a Potent Nonpeptidomimetic, Small-Molecule Antagonist of Cellular Inhibitor of Apoptosis Protein 1 (cIAP1) and X-Linked Inhibitor of Apoptosis Protein (XIAP).
J. Med. Chem., 60, 2017
5WKS
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BU of 5wks by Molmil
Crystal structure of chalcone isomerase engineered from ancestral inference complexed with naringenin (ancR1)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Engineered Chalcone Isomerase ancR1, FORMIC ACID, ...
著者Burke, J.R, Kaltenbach, M, Tawfik, D.S, Noel, J.P.
登録日2017-07-25
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Evolution of chalcone isomerase from a noncatalytic ancestor.
Nat. Chem. Biol., 14, 2018
5WL5
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BU of 5wl5 by Molmil
Crystal structure of chalcone isomerase engineered from ancestral inference (ancR5)
分子名称: CHLORIDE ION, Engineered Chalcone Isomerase ancR5, SULFATE ION
著者Burke, J.R, Kaltenbach, M, Tawfik, D.S, Noel, J.P.
登録日2017-07-25
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.513 Å)
主引用文献Evolution of chalcone isomerase from a noncatalytic ancestor.
Nat. Chem. Biol., 14, 2018
6I03
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BU of 6i03 by Molmil
D10N variant of beta-phosphoglucomutase from Lactococcus lactis complexed with tetrafluoroaluminate and beta-G6P to 1.02 A
分子名称: 6-O-phosphono-beta-D-glucopyranose, Beta-phosphoglucomutase, MAGNESIUM ION, ...
著者Robertson, A.J, Waltho, J.P.
登録日2018-10-24
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Proton transfer modulates the electrostatic environment in a general acid-base catalyzed phosphoryl transfer reaction
To Be Published
5WL7
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BU of 5wl7 by Molmil
Crystal structure of chalcone isomerase engineered from ancestral inference (ancCHI*)
分子名称: CHLORIDE ION, Engineered Chalcone Isomerase ancCHI*
著者Burke, J.R, Kaltenbach, M, Tawfik, D.S, Noel, J.P.
登録日2017-07-25
公開日2018-05-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Evolution of chalcone isomerase from a noncatalytic ancestor.
Nat. Chem. Biol., 14, 2018
6H8R
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BU of 6h8r by Molmil
CRYSTAL STRUCTURE OF THE HUMAN PROTEIN TYROSINE PHOSPHATASE PTPN5 (STEP) IN COMPLEX WITH COMPOUND 2
分子名称: 3-[(2~{S})-2-azanylpropyl]-5-(trifluoromethyl)phenol, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5
著者Hoerer, S, Fiegen, D, Schnapp, G.
登録日2018-08-03
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Allosteric Activation of Striatal-Enriched Protein Tyrosine Phosphatase (STEP, PTPN5) by a Fragment-like Molecule.
J. Med. Chem., 62, 2019
6H9V
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BU of 6h9v by Molmil
Crystal structure of deaminated P domain from norovirus strain Saga GII-4 in complex with Fuc
分子名称: MAGNESIUM ION, VP1, methyl alpha-L-fucopyranoside
著者Meyer, P.H.O, Blaum, B.S.
登録日2018-08-06
公開日2019-04-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献A post-translational modification of human Norovirus capsid protein attenuates glycan binding.
Nat Commun, 10, 2019
6HDF
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BU of 6hdf by Molmil
D170N variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.4 A.
分子名称: 1,2-ETHANEDIOL, Beta-phosphoglucomutase, SODIUM ION
著者Wood, H.P, Robertson, A.J, Bisson, C, Waltho, J.P.
登録日2018-08-17
公開日2020-08-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
6HDH
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BU of 6hdh by Molmil
R49K variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.6 A.
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Beta-phosphoglucomutase, ...
著者Robertson, A.J, Bisson, C, Waltho, J.P.
登録日2018-08-17
公開日2020-08-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
5NMS
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BU of 5nms by Molmil
Hsp21 dodecamer, structural model based on cryo-EM and homology modelling
分子名称: 25.3 kDa heat shock protein, chloroplastic
著者Rutsdottir, G, Harmark, J, Koeck, P.J.B, Hebert, H, Soderberg, C.A.G, Emanuelsson, C.
登録日2017-04-07
公開日2017-05-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Structural model of dodecameric heat-shock protein Hsp21: Flexible N-terminal arms interact with client proteins while C-terminal tails maintain the dodecamer and chaperone activity.
J. Biol. Chem., 292, 2017
6HFT
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BU of 6hft by Molmil
Hsp90 co-chaperone Cns1 from Saccharomyces cerevisiae (delta69)
分子名称: Hsp70/Hsp90 co-chaperone CNS1, MAGNESIUM ION
著者Huber, E.M, Groll, M.
登録日2018-08-21
公開日2019-03-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Co-chaperone Cns1 and the Recruiter Protein Hgh1 Link Hsp90 to Translation Elongation via Chaperoning Elongation Factor 2.
Mol.Cell, 74, 2019
6I4X
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BU of 6i4x by Molmil
Crystal structure of SOCS2:Elongin C:Elongin B in complex with erythropoietin receptor peptide
分子名称: DI(HYDROXYETHYL)ETHER, Elongin-B, Elongin-C, ...
著者Kung, W.W, Ramachandran, S, Makukhin, N, Bruno, E, Ciulli, A.
登録日2018-11-12
公開日2019-05-29
最終更新日2019-06-19
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural insights into substrate recognition by the SOCS2 E3 ubiquitin ligase.
Nat Commun, 10, 2019
6IDO
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BU of 6ido by Molmil
Crystal structure of Klebsiella pneumoniae sigma4 of sigmaS fusing with the RNA polymerase beta-flap-tip-helix in complex with -35 element DNA
分子名称: DNA (5'-D(P*CP*CP*AP*CP*TP*TP*GP*AP*CP*AP*AP*AP*TP*CP*G)-3'), DNA (5'-D(P*GP*AP*TP*TP*TP*GP*TP*CP*AP*AP*GP*TP*GP*GP*C)-3'), RNA polymerase sigma factor RpoS,RNA polymerase beta-flap-tip-helix
著者Lou, Y.C, Chien, C.Y, Chen, C, Hsu, C.H.
登録日2018-09-10
公開日2019-09-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.748 Å)
主引用文献Structural basis for -35 element recognition by sigma4chimera proteins and their interactions with PmrA response regulator.
Proteins, 88, 2020
5LSY
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BU of 5lsy by Molmil
Structure of the Epigenetic Oncogene MMSET and inhibition by N-Alkyl Sinefungin Derivatives
分子名称: Histone-lysine N-methyltransferase SETD2, THIOCYANATE ION, ZINC ION, ...
著者Tisi, D, Pathuri, P, Heightman, T.
登録日2016-09-05
公開日2016-10-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structure of the Epigenetic Oncogene MMSET and Inhibition by N-Alkyl Sinefungin Derivatives.
ACS Chem. Biol., 11, 2016
5WX9
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BU of 5wx9 by Molmil
Crystal Structure of AtERF96 with GCC-box
分子名称: Ethylene-responsive transcription factor ERF096, GCC-box motif
著者Chen, C.Y, Cheng, Y.S.
登録日2017-01-06
公開日2017-11-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box.
Plant Mol.Biol., 104, 2020
5LT6
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BU of 5lt6 by Molmil
Structure of the Epigenetic Oncogene MMSET and inhibition by N-Alkyl Sinefungin Derivatives
分子名称: Histone-lysine N-methyltransferase SETD2, THIOCYANATE ION, ZINC ION, ...
著者Tisi, D, Pathuri, P, Heightman, T.
登録日2016-09-06
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of the Epigenetic Oncogene MMSET and Inhibition by N-Alkyl Sinefungin Derivatives.
ACS Chem. Biol., 11, 2016
5YXM
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BU of 5yxm by Molmil
Crystal structure of Chlamydomonas Outer Arm Dynein Light Chain 1
分子名称: Dynein light chain 1, axonemal, PHOSPHATE ION
著者Toda, A, Tanaka, H, Nishikawa, Y, Yagi, T, Kurisu, G.
登録日2017-12-06
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.545 Å)
主引用文献Structural atlas of dynein motors at atomic resolution.
Biophys Rev, 10, 2018
6I3C
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BU of 6i3c by Molmil
Crystal structure of Human soluble catechol O-methyltransferase in complex with 3,5-dinitrocatechol and S-adensoyl-L-methionine
分子名称: 3,5-DINITROCATECHOL, Catechol O-methyltransferase, MAGNESIUM ION, ...
著者Levy, C.W.
登録日2018-11-05
公開日2019-09-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.336 Å)
主引用文献Equatorial Active Site Compaction and Electrostatic Reorganization in Catechol-O-methyltransferase.
Acs Catalysis, 9, 2019
5N2D
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BU of 5n2d by Molmil
Structure of PD-L1/small-molecule inhibitor complex
分子名称: Programmed cell death 1 ligand 1, ~{N}-[2-[[2,6-dimethoxy-4-[(2-methyl-3-phenyl-phenyl)methoxy]phenyl]methylamino]ethyl]ethanamide
著者Guzik, K, Zak, K.M, Grudnik, P, Dubin, G, Holak, T.A.
登録日2017-02-07
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Small-Molecule Inhibitors of the Programmed Cell Death-1/Programmed Death-Ligand 1 (PD-1/PD-L1) Interaction via Transiently Induced Protein States and Dimerization of PD-L1.
J. Med. Chem., 60, 2017
5LSS
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BU of 5lss by Molmil
Structure of the Epigenetic Oncogene MMSET and inhibition by N-Alkyl Sinefungin Derivatives
分子名称: Histone-lysine N-methyltransferase SETD2, THIOCYANATE ION, ZINC ION, ...
著者Tisi, D, Pathuri, P.
登録日2016-09-05
公開日2016-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structure of the Epigenetic Oncogene MMSET and Inhibition by N-Alkyl Sinefungin Derivatives.
ACS Chem. Biol., 11, 2016
6I1A
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BU of 6i1a by Molmil
Crystal structure of rutinosidase from Aspergillus niger
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, rutinosidase
著者Pachl, P, Rezacova, P, Kapesova, J.
登録日2018-10-28
公開日2020-01-29
最終更新日2020-08-12
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Rutinosidase from Aspergillus niger: crystal structure and insight into the enzymatic activity.
Febs J., 287, 2020

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