Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7CPN
DownloadVisualize
BU of 7cpn by Molmil
CRYSTAL STRUCTURE OF DODECAPRENYL DIPHOSPHATE SYNTHASE FROM THERMOBIFIDA FUSCA
分子名称: GLYCEROL, SULFATE ION, Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific)
著者Kurokawa, H, Ambo, T, Takahasi, S, Koyama, T.
登録日2020-08-07
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structure of Thermobifida fusca cis-prenyltransferase reveals the dynamic nature of its RXG motif-mediated inter-subunit interactions critical for its catalytic activity.
Biochem.Biophys.Res.Commun., 532, 2020
7CI7
DownloadVisualize
BU of 7ci7 by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
分子名称: (2R,3R)-2-azanyl-1-[4-[[4-[2-[4-(hydroxymethyl)phenyl]ethynyl]phenyl]methyl]piperidin-1-yl]-4-methylsulfonyl-3-oxidanyl-butan-1-one, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
著者Mima, M, Baker, L.M, Surgenor, A, Robertson, A.
登録日2020-07-07
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fragment-Based Discovery of Novel Non-Hydroxamate LpxC Inhibitors with Antibacterial Activity.
J.Med.Chem., 63, 2020
7CR1
DownloadVisualize
BU of 7cr1 by Molmil
human KCNQ2 in complex with ztz240
分子名称: N-(6-chloranylpyridin-3-yl)-4-fluoranyl-benzamide, Potassium voltage-gated channel subfamily KQT member 2
著者Li, X, Lv, D, Wang, J, Ye, S, Guo, J.
登録日2020-08-12
公開日2020-09-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Molecular basis for ligand activation of the human KCNQ2 channel.
Cell Res., 31, 2021
7CX9
DownloadVisualize
BU of 7cx9 by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with INZ-1
分子名称: 3-iodanyl-1~{H}-indazole-7-carbaldehyde, 3C-like proteinase, CHLORIDE ION, ...
著者Zeng, R, Liu, X.L, Qiao, J.X, Nan, J.S, Wang, Y.F, Li, Y.S, Yang, S.Y, Lei, J.
登録日2020-09-01
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structure of the SARS-CoV-2 main protease in complex with INZ-1
To Be Published
7C7S
DownloadVisualize
BU of 7c7s by Molmil
Cryo-EM structure of the CGP54626-bound human GABA(B) receptor in inactive state.
分子名称: (R)-(cyclohexylmethyl)[(2S)-3-{[(1S)-1-(3,4-dichlorophenyl)ethyl]amino}-2-hydroxypropyl]phosphinic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid type B receptor subunit 1, ...
著者Mao, C, Shen, C, Li, C, Shen, D, Xu, C, Zhang, S, Zhou, R, Shen, Q, Chen, L, Jiang, Z, Liu, J, Zhang, Y.
登録日2020-05-26
公開日2020-07-01
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structures of inactive and active GABABreceptor.
Cell Res., 30, 2020
7C8R
DownloadVisualize
BU of 7c8r by Molmil
Complex Structure of SARS-CoV-2 3CL Protease with TG-0203770
分子名称: 3C-like proteinase, ethyl (4R)-4-[[(2S)-4-methyl-2-[[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]-2-(phenylmethoxycarbonylamino)butanoyl]amino]pentanoyl]amino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoate
著者Lee, C.C, Wang, A.H.J, Kuo, C.J, Liang, P.H.
登録日2020-06-03
公開日2020-06-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Complex Structures and Cellular Activities of the Potent SARS-CoV-2 3CLpro Inhibitors Guiding Drug Discovery Against COVID-19
To Be Published
7CBD
DownloadVisualize
BU of 7cbd by Molmil
Catalytic domain of Cellulomonas fimi Cel6B
分子名称: Exoglucanase A
著者Nakamura, A, Ishiwata, D, Visootsat, A, Uchiyama, T, Mizutani, K, Kaneko, S, Murata, T, Igarashi, K, Iino, R.
登録日2020-06-12
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Domain architecture divergence leads to functional divergence in binding and catalytic domains of bacterial and fungal cellobiohydrolases.
J.Biol.Chem., 295, 2020
7CBS
DownloadVisualize
BU of 7cbs by Molmil
Crystal structure of SpaB basal pilin from Lactobacillus rhamnosus GG
分子名称: CHLORIDE ION, LPXTG cell wall anchor domain-containing protein, MAGNESIUM ION
著者Megta, A.K, Pratap, S, Kant, A, Krishnan, V.
登録日2020-06-13
公開日2020-12-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal structure of the atypically adhesive SpaB basal pilus subunit: Mechanistic insights about its incorporation in lactobacillar SpaCBA pili.
Curr Res Struct Biol, 2, 2020
5MO3
DownloadVisualize
BU of 5mo3 by Molmil
Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 8.5
分子名称: Fab of monoclonal antibody, heavy chain, light chain, ...
著者Skrabana, R, Novak, M.
登録日2016-12-13
公開日2018-05-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 8.5
To be published
7CEH
DownloadVisualize
BU of 7ceh by Molmil
Crystal structure of PET-degrading cutinase Cut190 S176A/S226P/R228S/ mutant with the C-terminal three residues deletion in ligand ejecting form
分子名称: Alpha/beta hydrolase family protein, CALCIUM ION
著者Senga, A, Numoto, N, Ito, N, Kawai, F, Oda, M.
登録日2020-06-23
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Multiple structural states of Ca2+-regulated PET hydrolase, Cut190, and its correlation with activity and stability.
J.Biochem., 169, 2021
7C2O
DownloadVisualize
BU of 7c2o by Molmil
Crystal structure of the R-specific Carbonyl Reductase from Candida parapsilosis ATCC 7330 without DTT
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, R-specific carbonyl reductase, ...
著者Vinaykumar, K, KanalElamparithi, B, Chaudhury, D, Gunasekaran, K, Chadha, A.
登録日2020-05-08
公開日2020-05-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the R-specific Carbonyl Reductase from Candida parapsilosis ATCC 7330 without DTT
To Be Published
8TGO
DownloadVisualize
BU of 8tgo by Molmil
Crystal structure of the BG505 triple tandem trimer gp140 HIV-1 Env in complex with PGT124 and 35O22
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 scFv, ...
著者Xian, Y, Yuan, M, Wilson, I.A.
登録日2023-07-12
公開日2024-04-17
実験手法X-RAY DIFFRACTION (5.75 Å)
主引用文献Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines.
Npj Vaccines, 9, 2024
7CI8
DownloadVisualize
BU of 7ci8 by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
分子名称: (1S)-1-[1-[(5-phenyl-1,2-oxazol-3-yl)methyl]imidazol-2-yl]ethanol, MAGNESIUM ION, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ...
著者Mima, M, Baker, L.M, Surgenor, A, Robertson, A.
登録日2020-07-07
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Fragment-Based Discovery of Novel Non-Hydroxamate LpxC Inhibitors with Antibacterial Activity.
J.Med.Chem., 63, 2020
3NKM
DownloadVisualize
BU of 3nkm by Molmil
Crystal structure of mouse autotaxin
分子名称: (2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nishimasu, H, Ishitani, R, Mihara, E, Takagi, J, Aoki, J, Nureki, O.
登録日2010-06-20
公開日2011-01-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Crystal structure of autotaxin and insight into GPCR activation by lipid mediators
Nat.Struct.Mol.Biol., 18, 2011
7CIE
DownloadVisualize
BU of 7cie by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
分子名称: (2R)-2-azanyl-3-oxidanyl-N-[3-(trifluoromethyloxy)phenyl]propanamide, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
著者Baker, L.M, Mima, M, Surgenor, A, Robertson, A.
登録日2020-07-07
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Fragment-Based Discovery of Novel Non-Hydroxamate LpxC Inhibitors with Antibacterial Activity.
J.Med.Chem., 63, 2020
7AAR
DownloadVisualize
BU of 7aar by Molmil
sugar/H+ symporter STP10 in inward open conformation
分子名称: CHLORIDE ION, Octyl Glucose Neopentyl Glycol, Sugar transport protein 10, ...
著者Bavnhoej, L, Paulsen, P.A, Pedersen, B.P.
登録日2020-09-04
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Molecular mechanism of sugar transport in plants unveiled by structures of glucose/H + symporter STP10.
Nat.Plants, 7, 2021
7CI6
DownloadVisualize
BU of 7ci6 by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
分子名称: (1S)-1-[1-[3-(4-chlorophenyl)propyl]imidazol-2-yl]ethanol, CHLORIDE ION, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ...
著者Mima, M, Baker, L.M, Surgenor, A, Robertson, A.
登録日2020-07-07
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Fragment-Based Discovery of Novel Non-Hydroxamate LpxC Inhibitors with Antibacterial Activity.
J.Med.Chem., 63, 2020
7CMG
DownloadVisualize
BU of 7cmg by Molmil
The Structure of the periplasmic domain of PorM
分子名称: Por secretion system protein porM/gldM
著者Sato, K, Okada, K, Nakayam, K, Imada, K.
登録日2020-07-27
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献PorM, a core component of bacterial type IX secretion system, forms a dimer with a unique kinked-rod shape.
Biochem.Biophys.Res.Commun., 532, 2020
7CQJ
DownloadVisualize
BU of 7cqj by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) C50S/K84A/C207S/C213S mutant (ApPrx*K84A)
分子名称: Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2020-08-11
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Rebuilding Ring-Type Assembly of Peroxiredoxin by Chemical Modification.
Bioconjug.Chem., 32, 2021
8TFL
DownloadVisualize
BU of 8tfl by Molmil
Ricin in complex with Fab SylH3
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, NONAETHYLENE GLYCOL, ...
著者Rudolph, M.J, Mantis, N.
登録日2023-07-11
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Structural Basis of Antibody-Mediated Inhibition of Ricin Toxin Attachment to Host Cells.
Biochemistry, 62, 2023
7CUC
DownloadVisualize
BU of 7cuc by Molmil
Crystal Structure of Urate Oxidase from Bacillus sp. TB-90 in the absence from Chloride Anion at 1.44 A resolution
分子名称: 2-METHOXYETHANOL, 8-AZAXANTHINE, OXYGEN MOLECULE, ...
著者Hibi, T, Itoh, T.
登録日2020-08-22
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Identification of quasi-stable water molecules near the Thr73-Lys13 catalytic diad of Bacillus sp. TB-90 urate oxidase by X-ray crystallography with controlled humidity.
J.Biochem., 169, 2021
7CTS
DownloadVisualize
BU of 7cts by Molmil
Open form of PET-degrading cutinase Cut190 with thermostability-improving mutations of S226P/R228S/Q138A/D250C-E296C/Q123H/N202H and S176A inactivation
分子名称: 1,4-DIETHYLENE DIOXIDE, Alpha/beta hydrolase family protein, BICINE, ...
著者Emori, M, Numoto, N, Senga, A, Bekker, G.J, Kamiya, N, Ito, N, Kawai, F, Oda, M.
登録日2020-08-20
公開日2021-02-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural basis of mutants of PET-degrading enzyme from Saccharomonospora viridis AHK190 with high activity and thermal stability.
Proteins, 89, 2021
7AAQ
DownloadVisualize
BU of 7aaq by Molmil
sugar/H+ symporter STP10 in outward occluded conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, ACETATE ION, ...
著者Bavnhoej, L, Paulsen, P.A, Pedersen, B.P.
登録日2020-09-04
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Molecular mechanism of sugar transport in plants unveiled by structures of glucose/H + symporter STP10.
Nat.Plants, 7, 2021
7CV0
DownloadVisualize
BU of 7cv0 by Molmil
Crystal structure of B. halodurans NiaR in apo form
分子名称: Transcriptional regulator NiaR, ZINC ION
著者Lee, J.Y, Lee, D.W, Park, Y.W, Lee, M.Y, Jeong, K.H.
登録日2020-08-25
公開日2020-12-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Structural analysis and insight into effector binding of the niacin-responsive repressor NiaR from Bacillus halodurans.
Sci Rep, 10, 2020
7C7H
DownloadVisualize
BU of 7c7h by Molmil
Crystal structures of AKR1C3 ternary complex with NADP+ and the chromene derivative 2l
分子名称: 2-azanylidene-N-(3-ethylphenyl)-8-oxidanyl-chromene-3-carboxamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Irie, K, Toyooka, N, Endo, S.
登録日2020-05-25
公開日2020-09-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Development of Novel AKR1C3 Inhibitors as New Potential Treatment for Castration-Resistant Prostate Cancer.
J.Med.Chem., 63, 2020

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon