Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OM8
DownloadVisualize
BU of 5om8 by Molmil
Crystal form 2 of Alpha1-antichymotrypsin variant DBS-II-allo: an allosterically modulated drug-binding serpin for doxorubicin
分子名称: 1,2-ETHANEDIOL, Alpha-1-antichymotrypsin, CHLORIDE ION, ...
著者Schmidt, K, Muller, Y.A.
登録日2017-07-28
公開日2018-05-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Design of an allosterically modulated doxycycline and doxorubicin drug-binding protein.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7UQ9
DownloadVisualize
BU of 7uq9 by Molmil
S48T Horse Liver Alcohol Dehydrogenase in Complex with NADH and N-Cyclohexylformamide
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alcohol dehydrogenase E chain, CYCLOHEXYLFORMAMIDE, ...
著者Zheng, C, Boxer, S.G.
登録日2022-04-19
公開日2023-02-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Enhanced active-site electric field accelerates enzyme catalysis.
Nat.Chem., 15, 2023
6GVD
DownloadVisualize
BU of 6gvd by Molmil
Alpha-galactosidase from Thermotoga maritima in complex with cyclohexene-based carbasugar mimic of galactose
分子名称: (1~{S},2~{S},3~{S},4~{S})-5-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol, Alpha-galactosidase, MAGNESIUM ION, ...
著者Gloster, T.M, Pengelly, R.J.
登録日2018-06-20
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level.
Nat Commun, 9, 2018
5F89
DownloadVisualize
BU of 5f89 by Molmil
Structure of the Unliganded Fab from HIV-1 Neutralising Antibody CAP248-2B that Binds to the gp120 C-terminus - gp41 Interface
分子名称: CAP248-2B Heavy Chain, CAP248-2B Light Chain
著者Wibmer, C.K, Gorman, J, Kwong, P.D.
登録日2015-12-09
公開日2016-12-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7842 Å)
主引用文献Structure and Recognition of a Novel HIV-1 gp120-gp41 Interface Antibody that Caused MPER Exposure through Viral Escape.
PLoS Pathog., 13, 2017
9IIL
DownloadVisualize
BU of 9iil by Molmil
Structure of the complex of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii with nicotinamide adenine dinucleotide in the presence of poly(ethylene glycol) at 2.20 A resolution
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
著者Viswanathan, V, Kumari, A, Singh, A, Kumar, A, Sharma, P, Chopra, S, Jeyakanthan, J, Sharma, S, Raje, C.I, Singh, T.P.
登録日2024-06-20
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the complex of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii with nicotinamide adenine dinucleotide in the presence of poly(ethylene glycol) at 2.20 A resolution
To Be Published
6I6T
DownloadVisualize
BU of 6i6t by Molmil
SEPIAPTERIN REDUCTASE IN COMPLEX WITH COMPOUND 5
分子名称: 1,2-ETHANEDIOL, 4-bromanyl-1-oxidanyl-naphthalene-2-carboxylic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Alen, J, Schade, M, Wagener, M, Blaesse, M.
登録日2018-11-15
公開日2019-07-10
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Fragment-Based Discovery of Novel Potent Sepiapterin Reductase Inhibitors.
J.Med.Chem., 62, 2019
6FMS
DownloadVisualize
BU of 6fms by Molmil
IMISX-EP of Se-LspA
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Globomycin, Lipoprotein signal peptidase
著者Huang, C.-Y, Olieric, V, Howe, N, Warshamanage, R, Weinert, T, Panepucci, E, Vogeley, L, Basu, S, Diederichs, K, Caffrey, M, Wang, M.
登録日2018-02-02
公開日2018-08-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献In situ serial crystallography for rapid de novo membrane protein structure determination.
Commun Biol, 1, 2018
6UOF
DownloadVisualize
BU of 6uof by Molmil
1.2 Angstrom Resolution Crystal Structure of CBS Domains of Transcriptional Regulator from Streptococcus pneumoniae
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
著者Minasov, G, Shuvalova, L, Dubrovska, I, Kiryukhina, O, Endres, M, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-10-14
公開日2019-11-06
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献1.2 Angstrom Resolution Crystal Structure of CBS Domains of Transcriptional Regulator from Streptococcus pneumoniae
To Be Published
6G7D
DownloadVisualize
BU of 6g7d by Molmil
Structure of MeT1 from Mycobacterium hassiacum in complex with SAM and glycerol.
分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Pereira, P.J.B, Ripoll-Rozada, J.
登録日2018-04-05
公開日2019-01-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Biosynthesis of mycobacterial methylmannose polysaccharides requires a unique 1-O-methyltransferase specific for 3-O-methylated mannosides.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6ZNT
DownloadVisualize
BU of 6znt by Molmil
MaeB PTA domain, acetyl-CoA bound form
分子名称: 1,2-ETHANEDIOL, ACETYL COENZYME *A, DI(HYDROXYETHYL)ETHER, ...
著者Lovering, A.L, Harding, C.J.
登録日2020-07-06
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献A rotary mechanism for allostery in bacterial hybrid malic enzymes.
Nat Commun, 12, 2021
8GHE
DownloadVisualize
BU of 8ghe by Molmil
The structure of h12-LOX in tetrameric form bound to endogenous inhibitor oleoyl-CoA
分子名称: FE (II) ION, Polyunsaturated fatty acid lipoxygenase ALOX12, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)
著者Black, K.A, Mobbs, J.I, Venugopal, H, Thal, D.M, Glukhova, A.
登録日2023-03-09
公開日2023-08-09
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (2.05 Å)
主引用文献Cryo-EM structures of human arachidonate 12S-lipoxygenase bound to endogenous and exogenous inhibitors.
Blood, 142, 2023
8URP
DownloadVisualize
BU of 8urp by Molmil
Cholinephosphotransferase in complex with CDP-choline and phosphatidylcholine
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cholinephosphotransferase 1, ...
著者Roberts, J.R, Maeda, S, Ohi, M.D.
登録日2023-10-26
公開日2024-10-30
最終更新日2025-01-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for catalysis and selectivity of phospholipid synthesis by eukaryotic choline-phosphotransferase.
Nat Commun, 16, 2025
9IT1
DownloadVisualize
BU of 9it1 by Molmil
Crystal structure of Pin1 using laue diffraction
分子名称: 3,6,9,12,15-PENTAOXAHEPTADECANE, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Sun, B, Qi, Q, Xiao, Q.J, Wang, Z.J.
登録日2024-07-19
公開日2024-08-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Prolyl Isomerase NIMA-interacting 1 (Pin1) using laue diffraction
To Be Published
7ZHT
DownloadVisualize
BU of 7zht by Molmil
Leishmania donovani Glucose 6-Phosphate Dehydrogenase apo form
分子名称: 1,2-ETHANEDIOL, Glucose-6-phosphate 1-dehydrogenase, SULFATE ION
著者Fritz-Wolf, K, Berneburg, I.
登録日2022-04-07
公開日2022-12-14
最終更新日2025-10-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Leishmania donovani glucose 6-phosphate dehydrogenase reveals a unique N-terminal domain.
Commun Biol, 5, 2022
6FSJ
DownloadVisualize
BU of 6fsj by Molmil
Crystal structure of TCE-treated Lysozyme
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Lysozyme C
著者Pichlo, C, Baumann, U.
登録日2018-02-19
公開日2018-05-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6G85
DownloadVisualize
BU of 6g85 by Molmil
Structure of Cdc14 bound to CBK1 PxL motif
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CBK1, ...
著者Mouilleron, S, Kataria, M, Uhlmann, F.
登録日2018-04-07
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.528 Å)
主引用文献A PxL motif promotes timely cell cycle substrate dephosphorylation by the Cdc14 phosphatase.
Nat. Struct. Mol. Biol., 25, 2018
7ZB9
DownloadVisualize
BU of 7zb9 by Molmil
Crystal structure of CYP124 in complex with inhibitor carbethoxyhexyl imidazole in the absence of glycerol (NoCryo)
分子名称: CHLORIDE ION, CYP124 in complex with inhibitor carbethoxyhexyl imidazole, MAGNESIUM ION, ...
著者Bukhdruker, S, Varaksa, T, Marin, E, Gilep, A, Strushkevich, N, Borshchevskiy, V.
登録日2022-03-23
公開日2023-01-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural insights into the effects of glycerol on ligand binding to cytochrome P450.
Acta Crystallogr D Struct Biol, 79, 2023
6PR6
DownloadVisualize
BU of 6pr6 by Molmil
S. aureus dihydrofolate reductase co-crystallized with para-tolyl-dihydropthalazine inhibitor and NADP(H)
分子名称: (2E)-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(4-methylphenyl)phthalazin-2(1H)-yl]prop-2-en-1-one, Dihydrofolate reductase, GLYCEROL, ...
著者Bourne, C.R, Thomas, L.M.
登録日2019-07-10
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Inhibitor design to target a unique feature in the folate pocket of Staphylococcus aureus dihydrofolate reductase.
Eur.J.Med.Chem., 200, 2020
6PR7
DownloadVisualize
BU of 6pr7 by Molmil
S. aureus dihydrofolate reductase co-crystallized with benzyl-dihydropthalazine inhibitor and NADP(H)
分子名称: (2E)-1-[(1S)-1-benzylphthalazin-2(1H)-yl]-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}prop-2-en-1-one, Dihydrofolate reductase, GLYCEROL, ...
著者Bourne, C.R, Thomas, L.M.
登録日2019-07-10
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Inhibitor design to target a unique feature in the folate pocket of Staphylococcus aureus dihydrofolate reductase.
Eur.J.Med.Chem., 200, 2020
6PRD
DownloadVisualize
BU of 6prd by Molmil
S. aureus dihydrofolate reductase co-crystallized with para-methoxyphenyl-dimethyoxydihydropthalazine inhibitor and NADP(H)
分子名称: 3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-6,7-dimethoxy-1-(4-methoxyphenyl)-3,4-dihydrophthalazin-2(1H)-yl]propan-1-one, Dihydrofolate reductase, GLYCEROL, ...
著者Bourne, C.R, Thomas, L.M.
登録日2019-07-10
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Inhibitor design to target a unique feature in the folate pocket of Staphylococcus aureus dihydrofolate reductase.
Eur.J.Med.Chem., 200, 2020
5WEG
DownloadVisualize
BU of 5weg by Molmil
Crystal Structure of UDP-glucose pyrophosphorylase from Sugarcane
分子名称: 1,2-ETHANEDIOL, SULFATE ION, UTP--glucose-1-phosphate uridylyltransferase
著者Cotrim, C.A, Soares, J.S.M, Kobe, B, Menossi, M.
登録日2017-07-10
公開日2018-03-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and insights into the oligomeric state of UDP-glucose pyrophosphorylase from sugarcane.
PLoS ONE, 13, 2018
6PR8
DownloadVisualize
BU of 6pr8 by Molmil
S. aureus dihydrofoate reductase co-crystallized with 3,5-dimethylphenyl-dihydropthalazine inhibitor and NADP(H)
分子名称: (2E)-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(3,5-dimethylphenyl)phthalazin-2(1H)-yl]prop-2-en-1-one, Dihydrofolate reductase, GLYCEROL, ...
著者Bourne, C.R, Thomas, L.M.
登録日2019-07-10
公開日2020-06-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Inhibitor design to target a unique feature in the folate pocket of Staphylococcus aureus dihydrofolate reductase.
Eur.J.Med.Chem., 200, 2020
9BK3
DownloadVisualize
BU of 9bk3 by Molmil
Crystal structure of Lactate dehydrogenase in complex with 4-((4-(1-methyl-1H-imidazole-2-carbonyl)phenyl)amino)-4-oxo-2-(4-(trifluoromethyl)phenyl)butanoic acid (R-enantiomer, orthorhombic P form)
分子名称: (2R)-4-[4-(1-methyl-1H-imidazole-2-carbonyl)anilino]-4-oxo-2-[4-(trifluoromethyl)phenyl]butanoic acid, CHLORIDE ION, L-lactate dehydrogenase A chain, ...
著者Lovell, S, Cooper, A, Battaile, K.P, Sharma, H.
登録日2024-04-26
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Synthesis and biological characterization of an orally bioavailable lactate dehydrogenase-A inhibitor against pancreatic cancer.
Eur.J.Med.Chem., 275, 2024
9IT3
DownloadVisualize
BU of 9it3 by Molmil
Human MTHFD2 in complex with compound 16e
分子名称: (2~{S})-2-[[4-[[2,4-bis(azanyl)-6-oxidanylidene-1~{H}-pyrimidin-5-yl]carbamoylamino]-3-chloranyl-phenyl]carbonylamino]pentanedioic acid, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, ...
著者Lee, L.C, Wu, S.Y.
登録日2024-07-19
公開日2025-01-01
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Development of Potent and Selective Inhibitors of Methylenetetrahydrofolate Dehydrogenase 2 for Targeting Acute Myeloid Leukemia: SAR, Structural Insights, and Biological Characterization.
J.Med.Chem., 67, 2024
9ITA
DownloadVisualize
BU of 9ita by Molmil
Human MTHFD2 in complex with compound 16d
分子名称: (2~{S})-2-[[4-[[2,4-bis(azanyl)-6-oxidanylidene-1~{H}-pyrimidin-5-yl]carbamoylamino]-3-methyl-phenyl]carbonylamino]pentanedioic acid, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, ...
著者Lee, L.C, Wu, S.Y.
登録日2024-07-19
公開日2025-01-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Development of Potent and Selective Inhibitors of Methylenetetrahydrofolate Dehydrogenase 2 for Targeting Acute Myeloid Leukemia: SAR, Structural Insights, and Biological Characterization.
J.Med.Chem., 67, 2024

243083

件を2025-10-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon