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8GBJ
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BU of 8gbj by Molmil
Cryo-EM structure of a human BCDX2/ssDNA complex
分子名称: DNA (5'-D(P*CP*CP*CP*CP*CP*C)-3'), DNA repair protein RAD51 homolog 2, DNA repair protein RAD51 homolog 3, ...
著者Jia, L, Wasmuth, E.V, Ruben, E.A, Sung, P, Rawal, Y, Greene, E.C, Meir, A, Olsen, S.K.
登録日2023-02-26
公開日2023-06-21
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structural insights into BCDX2 complex function in homologous recombination.
Nature, 619, 2023
8J9G
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BU of 8j9g by Molmil
CrtSPARTA hetero-dimer bound with guide-target, state 1
分子名称: DNA (25-MER), MAGNESIUM ION, Piwi domain-containing protein, ...
著者Li, Z.X, Guo, L.J, Huang, P.P, Xiao, Y.B, Chen, M.R.
登録日2023-05-03
公開日2024-03-06
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Auto-inhibition and activation of a short Argonaute-associated TIR-APAZ defense system.
Nat.Chem.Biol., 20, 2024
5J9R
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BU of 5j9r by Molmil
Structure of Penicillin V acylase from Agrobacterium tumefaciens
分子名称: Choloylglycine hydrolase
著者Ramasamy, S, Avinash, V.S, Pundle, A.V.
登録日2016-04-11
公開日2017-06-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Penicillin V acylases from gram-negative bacteria degrade N-acylhomoserine lactones and attenuate virulence in Pseudomonas aeruginosa.
Appl. Microbiol. Biotechnol., 101, 2017
5J84
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BU of 5j84 by Molmil
Crystal structure of L-arabinonate dehydratase in holo-form
分子名称: Dihydroxy-acid dehydratase, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2016-04-07
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of a Bacterial l-Arabinonate Dehydratase Contains a [2Fe-2S] Cluster.
ACS Chem. Biol., 12, 2017
8J8H
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BU of 8j8h by Molmil
SPARTA monomer bound with guide-target, state 2
分子名称: DNA (25-MER), MAGNESIUM ION, Piwi domain-containing protein, ...
著者Li, Z.X, Guo, L.J, Huang, P.P, Xiao, Y.B, Chen, M.R.
登録日2023-05-01
公開日2024-03-06
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Auto-inhibition and activation of a short Argonaute-associated TIR-APAZ defense system.
Nat.Chem.Biol., 20, 2024
6N2E
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BU of 6n2e by Molmil
Crystal Structure of Human Protocadherin-15 EC1-3 G16D N369D Q370N and Mouse Cadherin-23 EC1-2 T15E
分子名称: CALCIUM ION, Cadherin-23, Protocadherin-15
著者Choudhary, D, De-la-Torre, P, Sotomayor, M.
登録日2018-11-12
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 117, 2020
5JFT
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BU of 5jft by Molmil
Zebra Fish Caspase-3
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACE-ASP-GLU-VAL-ASK, ...
著者Tucker, M.B, MacKenzie, S.H, Maciag, J.J, Dirscherl, H, Swartz, P.D, Yoder, J.A, Hamilton, P.T, Clark, A.C.
登録日2016-04-19
公開日2016-10-26
最終更新日2016-11-02
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Phage display and structural studies reveal plasticity in substrate specificity of caspase-3a from zebrafish.
Protein Sci., 25, 2016
4XZ2
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BU of 4xz2 by Molmil
Human platelet phosphofructokinase in an R-state in complex with ADP and F6P, crystal form I
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, 6-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, ...
著者Kloos, M, Strater, N.
登録日2015-02-03
公開日2015-06-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Crystal structure of human platelet phosphofructokinase-1 locked in an activated conformation.
Biochem.J., 469, 2015
4XIM
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BU of 4xim by Molmil
PROTEIN ENGINEERING OF XYLOSE (GLUCOSE) ISOMERASE FROM ACTINOPLANES MISSOURIENSIS. 1. CRYSTALLOGRAPHY AND SITE-DIRECTED MUTAGENESIS OF METAL BINDING SITES
分子名称: COBALT (II) ION, D-XYLOSE ISOMERASE
著者Janin, J.
登録日1992-03-11
公開日1993-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Protein engineering of xylose (glucose) isomerase from Actinoplanes missouriensis. 1. Crystallography and site-directed mutagenesis of metal binding sites.
Biochemistry, 31, 1992
8AMU
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BU of 8amu by Molmil
RepB pMV158 OBD domain bound to DDR region
分子名称: DNA (5'-D(*AP*AP*AP*AP*GP*TP*CP*GP*CP*CP*GP*AP*AP*AP*AP*GP*TP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(*TP*CP*GP*GP*CP*GP*AP*CP*TP*TP*TP*TP*CP*GP*GP*CP*GP*AP*CP*TP*TP*TP*T)-3'), MANGANESE (II) ION, ...
著者Amodio, J, Machon, C, Boer, R.D, Ruiz-Maso, J.A, del Solar, G, Coll, M.
登録日2022-08-04
公開日2023-02-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of pMV158 replication initiator RepB with and without DNA reveal a flexible dual-function protein.
Nucleic Acids Res., 51, 2023
6POE
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BU of 6poe by Molmil
Structure of ACLY in complex with CoA
分子名称: ATP-citrate synthase, COENZYME A
著者Wei, X, Marmorstein, R.
登録日2019-07-03
公開日2019-12-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
6VMF
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BU of 6vmf by Molmil
Crystal structure of the Y766F mutant of GoxA soaked with glycine
分子名称: Glycine oxidase, MAGNESIUM ION, SULFATE ION
著者Yukl, E.T.
登録日2020-01-27
公開日2020-04-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Roles of active-site residues in catalysis, substrate binding, cooperativity, and the reaction mechanism of the quinoprotein glycine oxidase.
J.Biol.Chem., 295, 2020
4YW6
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BU of 4yw6 by Molmil
Structural Insight into Divalent Galactoside Binding to Pseudomonas aeruginosa lectin LecA
分子名称: CALCIUM ION, N-[(2S)-6-amino-1-oxo-1-(pyrrolidin-1-yl)hexan-2-yl]-4-(beta-D-galactopyranosyloxy)benzamide, PA-I galactophilic lectin
著者Visini, R, Jin, X, Michaud, G, Bergmann, M, Gillon, E, Imberty, A, Stocker, A, Darbre, T, Pieters, R, Reymond, J.-L.
登録日2015-03-20
公開日2015-09-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Insight into Multivalent Galactoside Binding to Pseudomonas aeruginosa Lectin LecA.
Acs Chem.Biol., 10, 2015
8IYQ
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BU of 8iyq by Molmil
Structure of CbCas9 bound to 20-nucleotide complementary DNA substrate
分子名称: NTS, TS, deadCbCas9, ...
著者Zhang, S, Lin, S, Liu, J.J.G.
登録日2023-04-05
公開日2024-06-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
6PK7
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BU of 6pk7 by Molmil
cryoEM structure of the product-bound human CTP synthase 2 filament
分子名称: ADENOSINE-5'-DIPHOSPHATE, CTP synthase 2, CYTIDINE-5'-TRIPHOSPHATE
著者Lynch, E.M, Kollman, J.M.
登録日2019-06-28
公開日2019-12-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Coupled structural transitions enable highly cooperative regulation of human CTPS2 filaments.
Nat.Struct.Mol.Biol., 27, 2020
6MWQ
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BU of 6mwq by Molmil
Single particle cryoEM structure of a DARPin-aldolase platform in complex with GFP
分子名称: DARPin, Muscle-type aldolase chimeric fusion, Green fluorescent protein
著者Weaver, S.J, Yao, Q.
登録日2018-10-30
公開日2018-11-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Fusion of DARPin to Aldolase Enables Visualization of Small Protein by Cryo-EM.
Structure, 27, 2019
6POF
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BU of 6pof by Molmil
Structure of human ATP citrate lyase
分子名称: ATP-citrate synthase
著者Wei, X, Marmorstein, R.
登録日2019-07-03
公開日2020-01-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
4YSV
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BU of 4ysv by Molmil
Structure of aminoacid racemase in apo-form
分子名称: Putative 4-aminobutyrate aminotransferase
著者Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
登録日2015-03-17
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
8KA5
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BU of 8ka5 by Molmil
Arabidopsis AP endonuclease ARP complex with 20bp THF-containing DNA
分子名称: 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE, DNA (43-MER), DNA-(apurinic or apyrimidinic site) endonuclease, ...
著者Guo, W.T, Wu, B.X.
登録日2023-08-02
公開日2024-02-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the catalytic mechanism of the AP endonuclease AtARP.
Structure, 32, 2024
8KA3
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BU of 8ka3 by Molmil
Arabidopsis AP endonuclease ARP complex with 22bp THF-containing DNA
分子名称: 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE, DNA (43-MER), DNA-(apurinic or apyrimidinic site) endonuclease, ...
著者Guo, W.T, Wu, B.X.
登録日2023-08-02
公開日2024-02-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into the catalytic mechanism of the AP endonuclease AtARP.
Structure, 32, 2024
6PCF
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BU of 6pcf by Molmil
Human Coa6: W59C mutant protein
分子名称: Cytochrome c oxidase assembly factor 6 homolog
著者Maher, M.J, Maghool, S.
登録日2019-06-17
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional characterization of the mitochondrial complex IV assembly factor Coa6.
Life Sci Alliance, 2, 2019
8OHA
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BU of 8oha by Molmil
Crystal structure of Leptospira interrogans GAPDH
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase, ...
著者Navas-Yuste, S, de la Paz, K, Querol-Garcia, J, Gomez-Quevedo, S, Rodriguez de Cordoba, S, Fernandez, F.J, Vega, M.C.
登録日2023-03-20
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献The structure of Leptospira interrogans GAPDH sheds light into an immunoevasion factor that can target the anaphylatoxin C5a of innate immunity.
Front Immunol, 14, 2023
4YSN
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BU of 4ysn by Molmil
Structure of aminoacid racemase in complex with PLP
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative 4-aminobutyrate aminotransferase
著者Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T.
登録日2015-03-17
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri.
Acta Crystallogr D Struct Biol, 73, 2017
7XPB
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BU of 7xpb by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
6MYX
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BU of 6myx by Molmil
EM structure of Bacillus subtilis ribonucleotide reductase inhibited double-helical filament of NrdE alpha subunit with dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Ribonucleoside-diphosphate reductase
著者Thomas, W.C, Bacik, J.P, Chen, J.Z, Ando, N.
登録日2018-11-02
公開日2019-06-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019

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件を2024-07-17に公開中

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