PDB: 486 件ウェブページステータス検索Chemie searchBIRD

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8C6J	Human spliceosomal PM5 C* complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Dybkov, O, Kastner, B, Luehrmann, R. 登録日 2023-01-12 公開日 2023-07-12 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Regulation of 3' splice site selection after step 1 of splicing by spliceosomal C* proteins. Sci Adv, 9, 2023
7O4J	Yeast RNA polymerase II transcription pre-initiation complex (consensus) 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O4I	Yeast RNA polymerase II transcription pre-initiation complex with initial transcription bubble 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O75	Yeast RNA polymerase II transcription pre-initiation complex with open promoter DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-13 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O4L	Yeast TFIIH in the expanded state within the pre-initiation complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O72	Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-12 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O73	Yeast RNA polymerase II transcription pre-initiation complex with closed distorted promoter DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-12 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O4K	Yeast TFIIH in the contracted state within the pre-initiation complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7OGM	A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. PNPase-3'ETS(leuZ)-Hfq 分子名称: 3'ETS(LeuZ), Polyribonucleotide nucleotidyltransferase, RNA-binding protein Hfq 著者 Dendooven, T, Sinha, D, Roesoleva, A, Cameron, T.A, De Lay, N, Luisi, B.F, Bandyra, K. 登録日 2021-05-06 公開日 2021-07-07 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 A cooperative PNPase-Hfq-RNA carrier complex facilitates bacterial riboregulation. Mol.Cell, 81, 2021
6QG1	Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model 2) 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V. 登録日 2019-01-10 公開日 2019-06-26 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural basis for the inhibition of translation through eIF2 alpha phosphorylation. Nat Commun, 10, 2019
7SYR	Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt). 分子名称: 18S rRNA, Eukaryotic translation initiation factor 1A, X-chromosomal, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-27 最終更新日 2022-08-24 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYS	Structure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII). 分子名称: 18S rRNA, Eukaryotic translation initiation factor 1A, X-chromosomal, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-27 最終更新日 2022-08-24 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
6QDV	Human post-catalytic P complex spliceosome 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Fica, S.M, Oubridge, C, Wilkinson, M.E, Newman, A.J, Nagai, K. 登録日 2019-01-03 公開日 2019-02-20 最終更新日 2024-09-11 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 A human postcatalytic spliceosome structure reveals essential roles of metazoan factors for exon ligation. Science, 363, 2019
6QG2	Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model A) 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V. 登録日 2019-01-10 公開日 2019-06-26 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural basis for the inhibition of translation through eIF2 alpha phosphorylation. Nat Commun, 10, 2019
6QG6	Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model D) 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V. 登録日 2019-01-10 公開日 2019-06-26 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (10.4 Å) 主引用文献 Structural basis for the inhibition of translation through eIF2 alpha phosphorylation. Nat Commun, 10, 2019
6QG0	Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model 1) 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V. 登録日 2019-01-10 公開日 2019-06-26 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (4.15 Å) 主引用文献 Structural basis for the inhibition of translation through eIF2 alpha phosphorylation. Nat Commun, 10, 2019
6QH2	Solution NMR ensemble for a chimeric KH-S1 domain construct of exosomal polynucleotide phosphrylase at 298K compiled using the CoMAND method 分子名称: Polyribonucleotide nucleotidyltransferase 著者 ElGamacy, M, Truffault, V, Zhu, H, Coles, M. 登録日 2019-01-14 公開日 2019-04-10 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Mapping Local Conformational Landscapes of Proteins in Solution. Structure, 27, 2019
6QG3	Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model B) 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V. 登録日 2019-01-10 公開日 2019-06-26 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (9.4 Å) 主引用文献 Structural basis for the inhibition of translation through eIF2 alpha phosphorylation. Nat Commun, 10, 2019
6QG5	Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model C) 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V. 登録日 2019-01-10 公開日 2019-06-26 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (10.1 Å) 主引用文献 Structural basis for the inhibition of translation through eIF2 alpha phosphorylation. Nat Commun, 10, 2019
7UBN	Transcription antitermination complex: NusA-containing "engaged" Qlambda-loading complex 分子名称: Antitermination protein, DNA (52-MER), DNA (53-MER), ... 著者 Yin, Z, Ebright, R.H. 登録日 2022-03-15 公開日 2022-09-28 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.36 Å) 主引用文献 In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel. Proc.Natl.Acad.Sci.USA, 119, 2022
7UND	Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Filipovski, M, Vos, S.M, Farnung, L. 登録日 2022-04-10 公開日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of nucleosome retention during transcription elongation. Science, 376, 2022
7UNC	Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Filipovski, M, Vos, S.M, Farnung, L. 登録日 2022-04-10 公開日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of nucleosome retention during transcription elongation. Science, 376, 2022
7UIF	Mediator-PIC Early (Core B) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K. 登録日 2022-03-29 公開日 2023-02-15 最終更新日 2023-03-08 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural basis of a transcription pre-initiation complex on a divergent promoter. Mol.Cell, 83, 2023
8CEE	Rnase R bound to a 30S degradation intermediate (State I - head-turning) 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Paternoga, H, Dimitrova-Paternoga, L, Wilson, D.N. 登録日 2023-02-01 公開日 2023-12-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural basis of ribosomal 30S subunit degradation by RNase R. Nature, 626, 2024
8CEC	Rnase R bound to a 30S degradation intermediate (State I - head-turning) 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Paternoga, H, Dimitrova-Paternoga, L, Wilson, D.N. 登録日 2023-02-01 公開日 2023-12-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.57 Å) 主引用文献 Structural basis of ribosomal 30S subunit degradation by RNase R. Nature, 626, 2024

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