PDB: 462 件ウェブページステータス検索Chemie searchBIRD

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7PY3	CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (the consensus NusA-EC) 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Zhu, C, Guo, X, Weixlbaumer, A. 登録日 2021-10-08 公開日 2022-03-23 最終更新日 2022-10-05 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Transcription factors modulate RNA polymerase conformational equilibrium. Nat Commun, 13, 2022
7PY5	CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (the consensus NusA-NusG-EC) 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Zhu, C, Guo, X, Weixlbaumer, A. 登録日 2021-10-09 公開日 2022-03-23 最終更新日 2022-10-05 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Transcription factors modulate RNA polymerase conformational equilibrium. Nat Commun, 13, 2022
6TQO	rrn anti-termination complex 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S4, DNA-directed RNA polymerase subunit alpha, ... 著者 Huang, Y.H, Wahl, M.C, Loll, B, Hilal, T, Said, N. 登録日 2019-12-17 公開日 2020-08-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis. Mol.Cell, 79, 2020
6SW9	IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Mechulam, Y, Schmitt, E. 登録日 2019-09-20 公開日 2020-02-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation. Commun Biol, 3, 2020
6TQN	rrn anti-termination complex without S4 分子名称: 30S ribosomal protein S10, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Huang, Y.H, Wahl, M.C, Loll, B, Hilal, T, Said, N. 登録日 2019-12-17 公開日 2020-08-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis. Mol.Cell, 79, 2020
7QP7	Structure of the human 48S initiation complex in closed state (h48S AUG closed) 分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N. 登録日 2022-01-03 公開日 2022-05-11 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Conformational rearrangements upon start codon recognition in human 48S translation initiation complex. Nucleic Acids Res., 50, 2022
7QP6	Structure of the human 48S initiation complex in open state (h48S AUG open) 分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N. 登録日 2022-01-03 公開日 2022-05-11 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Conformational rearrangements upon start codon recognition in human 48S translation initiation complex. Nucleic Acids Res., 50, 2022
6SWC	IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi 分子名称: 16S ribosomal rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Mechulam, Y, Schmitt, E. 登録日 2019-09-20 公開日 2020-02-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation. Commun Biol, 3, 2020
5C4X	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-18 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C4A	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Saphr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C3E	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5C44	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-17 公開日 2015-08-26 実験手法 X-RAY DIFFRACTION (3.95 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
5FLM	Structure of transcribing mammalian RNA polymerase II 分子名称: DNA, DNA-RNA ELONGATION SCAFFOLD, DNA-DIRECTED RNA POLYMERASE, ... 著者 Bernecky, C, Herzog, F, Baumeister, W, Plitzko, J.M, Cramer, P. 登録日 2015-10-26 公開日 2016-01-20 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of Transcribing Mammalian RNA Polymerase II Nature, 529, 2016
6X7K	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Ebright, R.H, Wang, C, Su, M. 登録日 2020-05-30 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6X7F	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Ebright, R.H, Wang, C, Su, M. 登録日 2020-05-29 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6XDQ	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Ebright, R.H, Wang, C, Su, M. 登録日 2020-06-11 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6XAV	CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex bound with NusG 分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Hao, Z.T, Kim, H.K, Walz, T, Nudler, E. 登録日 2020-06-04 公開日 2020-12-16 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Pre-termination Transcription Complex: Structure and Function. Mol.Cell, 81, 2021
6XGF	Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Su, M, Ebright, R.H. 登録日 2020-06-17 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6X9Q	Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 27 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Ebright, R.H, Wang, C, Su, M. 登録日 2020-06-03 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6XII	Escherichia coli transcription-translation complex B (TTC-B) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Molodtsov, V, Wang, C, Su, M, Ebright, R.H. 登録日 2020-06-20 公開日 2020-09-02 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (7 Å) 主引用文献 Structural basis of transcription-translation coupling. Science, 369, 2020
6XAS	CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex 分子名称: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Hao, Z.T, Kim, H.K, Walz, T, Nudler, E. 登録日 2020-06-04 公開日 2020-12-16 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Pre-termination Transcription Complex: Structure and Function. Mol.Cell, 81, 2021
4Q7J	Complex structure of viral RNA polymerase 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu 1, ... 著者 Takeshita, D. 登録日 2014-04-25 公開日 2014-08-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Molecular insights into replication initiation by Q beta replicase using ribosomal protein S1. Nucleic Acids Res., 42, 2014
2A19	PKR kinase domain- eIF2alpha- AMP-PNP complex. 分子名称: Eukaryotic translation initiation factor 2 alpha subunit, Interferon-induced, double-stranded RNA-activated protein kinase, ... 著者 Dar, A.C, Dever, T.E, Sicheri, F. 登録日 2005-06-19 公開日 2005-09-27 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Higher-Order Substrate Recognition of eIF2alpha by the RNA-Dependent Protein Kinase PKR. Cell(Cambridge,Mass.), 122, 2005
4R71	Structure of the Qbeta holoenzyme complex in the P1211 crystal form 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu, ... 著者 Gytz, H, Seweryn, P, Kutlubaeva, Z, Chetverin, A.B, Brodersen, D.E, Knudsen, C.R. 登録日 2014-08-26 公開日 2015-09-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for RNA-genome recognition during bacteriophage Q beta replication. Nucleic Acids Res., 43, 2015
1Y1Y	RNA Polymerase II-TFIIS-DNA/RNA complex 分子名称: 5'-D(P*TP*AP*CP*GP*CP*CP*T)-3', 5'-R(P*AP*GP*GP*C)-3', DNA-directed RNA polymerase II 13.6 kDa polypeptide, ... 著者 Cramer, P, Kettenberger, H, Armache, K.-J. 登録日 2004-11-19 公開日 2004-12-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol.Cell, 16, 2004

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