PDB: 31171 件ウェブページステータス検索Chemie searchBIRD

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7OG1	AP2 clathrin adaptor core in complex with cargo peptide and FCHO2 分子名称: AP-2 complex subunit alpha-2, AP-2 complex subunit beta, AP-2 complex subunit mu, ... 著者 Zaccai, N.R, Kelly, B.T, Evans, P.R, Owen, D.J. 登録日 2021-05-05 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 FCHO controls AP2's initiating role in endocytosis through a PtdIns(4,5)P 2 -dependent switch. Sci Adv, 8, 2022
7VYZ	Structure of the M. tuberculosis HtrA S367A mutant 分子名称: Probable serine protease HtrA1 著者 Gupta, A.K, Gopal, B. 登録日 2021-11-15 公開日 2022-11-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.401 Å) 主引用文献 Allosteric Determinants in High Temperature Requirement A Enzymes Are Conserved and Regulate the Population of Active Conformations. Acs Chem.Biol., 18, 2023
5LC9	Structure of Polyphosphate Kinase from Meiothermus ruber Apo-form 分子名称: PHOSPHATE ION, Polyphosphate:AMP phosphotransferase, SULFATE ION 著者 Kemper, F, Einsle, O, Gerhardt, S. 登録日 2016-06-20 公開日 2017-06-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.903 Å) 主引用文献 Substrate recognition and mechanism revealed by ligand-bound polyphosphate kinase 2 structures. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5X1J	Vanillate/3-O-methylgallate O-demethylase, LigM, vanillate complex form 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-HYDROXY-3-METHOXYBENZOATE, ... 著者 Harada, A, Senda, T. 登録日 2017-01-26 公開日 2017-05-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The crystal structure of a new O-demethylase from Sphingobium sp. strain SYK-6 FEBS J., 284, 2017
5ETV	S. aureus 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.72 angstrom resolution 分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 2-azanyl-8-[2-(4-bromophenyl)-2-oxidanylidene-ethyl]sulfanyl-1,9-dihydropurin-6-one, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ... 著者 Dennis, M.L, Peat, T.S, Swarbrick, J.D. 登録日 2015-11-18 公開日 2016-05-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Structural Basis for the Selective Binding of Inhibitors to 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase from Staphylococcus aureus and Escherichia coli. J.Med.Chem., 59, 2016
7OXH	ttSlyD with pseudo-wild-type S2 peptide 分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 30S ribosomal protein S2, CHLORIDE ION, ... 著者 Pazicky, S, Lei, J, Loew, C. 登録日 2021-06-22 公開日 2022-03-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Impact of distant peptide substrate residues on enzymatic activity of SlyD. Cell.Mol.Life Sci., 79, 2022
8D6S	Rana catesbeiana saxiphilin mutant - Y558A:STX (co-crystal) 分子名称: Saxiphilin, [(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate 著者 Chen, Z, Zakrzewska, S, Minor, D.L. 登録日 2022-06-06 公開日 2022-11-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family. Proc.Natl.Acad.Sci.USA, 119, 2022
8KCK	De novo design protein -N9 分子名称: De novo design protein -N9 著者 Wang, S, Liu, Y. 登録日 2023-08-07 公開日 2024-08-14 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 De novo design protein -N9 To Be Published
7ODU	Natural killer cell receptor NKR-P1B from Rattus norvegicus in complex with its cognate ligand Clr-11 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C-type lectin domain family 2 member D11, ... 著者 Skalova, T, Blaha, J, Kalouskova, B, Skorepa, O, Vanek, O, Dohnalek, J. 登録日 2021-04-30 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Natural killer cell receptor NKR-P1B from Rattus norvegicus in complex with its cognate ligand Clr-11 To Be Published
7OHG	Structure of Thermus thermophilus Rel bound to the non-hydrolasable alarmone analogue 分子名称: CHLORIDE ION, FORMIC ACID, GLYCEROL, ... 著者 Garcia-Pino, A. 登録日 2021-05-11 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.507 Å) 主引用文献 Structure of Thermus thermophilus Rel bound to the non-hydrolasable alarmone analogue To Be Published
5ETS	S. aureus 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.95 angstrom resolution 分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 2-azanyl-8-[(4-chlorophenyl)methylsulfanyl]-1,9-dihydropurin-6-one, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ... 著者 Dennis, M.L, Peat, T.S, Swarbrick, J.D. 登録日 2015-11-18 公開日 2016-05-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural Basis for the Selective Binding of Inhibitors to 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase from Staphylococcus aureus and Escherichia coli. J.Med.Chem., 59, 2016
5F5K	E.Coli GlpG Y205F mutant complexed with aldehyde inhibitor in DMPC/CHAPSO bicelle 分子名称: Peptidic derivative of Gurken: ACE-ARG-LYS-VAL-ARG-MET-ALA-aldehyde, Rhomboid protease GlpG 著者 Urban, S, Cho, S, Dickey, S.W. 登録日 2015-12-04 公開日 2016-02-10 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis. Mol.Cell, 61, 2016
8D6M	Nanorana parkeri saxiphilin:STX (co-crystal) 分子名称: PENTAETHYLENE GLYCOL, Saxiphilin, [(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate 著者 Zakrzewska, S, Chen, Z, Minor, D.L. 登録日 2022-06-06 公開日 2022-11-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family. Proc.Natl.Acad.Sci.USA, 119, 2022
7OGW	Q9A mutant of Hfq protein from Neisseria meningitidis 分子名称: RNA-binding protein Hfq 著者 Moche, M, Karlsson, J, Loh, E. 登録日 2021-05-07 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.09 Å) 主引用文献 Crystal structures of wild type, Q9A and R17A single mutant Hfq structures from Neisseria meningitidis To Be Published
5ETT	S. aureus 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.55 angstrom resolution 分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 4-[(2-azanyl-6-oxidanylidene-1,9-dihydropurin-8-yl)sulfanylmethyl]-3-fluoranyl-benzenecarbonitrile, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ... 著者 Dennis, M.L, Peat, T.S, Swarbrick, J.D. 登録日 2015-11-18 公開日 2016-05-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural Basis for the Selective Binding of Inhibitors to 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase from Staphylococcus aureus and Escherichia coli. J.Med.Chem., 59, 2016
8KC0	De novo design protein -NB8 分子名称: De novo design protein -NB8 著者 Wang, S, Liu, Y. 登録日 2023-08-05 公開日 2024-08-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 De novo design protein -NB8 To Be Published
5ETQ	S. aureus 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.96 angstrom resolution 分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 4-{[(2-amino-6-oxo-6,9-dihydro-1H-purin-8-yl)sulfanyl]methyl}benzonitrile, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ... 著者 Dennis, M.L, Peat, T.S, Swarbrick, J.D. 登録日 2015-11-18 公開日 2016-05-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Structural Basis for the Selective Binding of Inhibitors to 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase from Staphylococcus aureus and Escherichia coli. J.Med.Chem., 59, 2016
8D6U	Rana catesbeiana saxiphilin:F-STX (soaked) 分子名称: (2P)-4-({6-[({[(3aS,4R,7R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methoxy}carbonyl)amino]hexyl}carbamoyl)-2-{[4aP,9(9a)P]-6-hydroxy-3-oxo-3H-xanthen-9-yl}benzoic acid, Saxiphilin 著者 Chen, Z, Zakrzewska, S, Minor, D.L. 登録日 2022-06-06 公開日 2022-11-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family. Proc.Natl.Acad.Sci.USA, 119, 2022
8KBH	Structure of CbTad1 complexed with 2',3'-cGAMP and cA3 分子名称: (2-ACETYL-5-METHYLANILINO)(2,6-DIBROMOPHENYL)ACETAMIDE, Thoeris anti-defense 1, cGAMP 著者 Xiao, Y, Feng, Y. 登録日 2023-08-04 公開日 2024-08-21 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Structure of CbTad1 complexed with 2',3'-cGAMP and cA3 To Be Published
5LFX	Lambda-[Ru(phen)2(dppz-11,12-Me)]2+ bound to a short substituted DNA sequence 分子名称: BARIUM ION, DNA (5'-D(*(CBR)P*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*G)-3'), ... 著者 Hall, J.P, Cardin, C.J. 登録日 2016-07-04 公開日 2017-02-15 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Guanine Can Direct Binding Specificity of Ru-dipyridophenazine (dppz) Complexes to DNA through Steric Effects. Chemistry, 23, 2017
5ETP	E. coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with AMPCPP and inhibitor at 1.05 angstrom resolution 分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 2-azanyl-8-[2-(4-bromophenyl)-2-oxidanylidene-ethyl]sulfanyl-1,9-dihydropurin-6-one, CALCIUM ION, ... 著者 Dennis, M.L, Peat, T.S, Swarbrick, J.D. 登録日 2015-11-17 公開日 2016-05-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Structural Basis for the Selective Binding of Inhibitors to 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase from Staphylococcus aureus and Escherichia coli. J.Med.Chem., 59, 2016
8KBJ	Structure of HgmTad2 complexed with 1',2'-cADPR 分子名称: (1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-amino-9H-purin-9-yl)-9,11,15,16,18-pentahydroxy-2,5,8,10,12,17-hexaoxa-9lambda~5~,11lambda~5~-diphosphatricyclo[12.2.1.1~3,6~]octadecane-9,11-dione, Inhibitor of Type II CRISPR-Cas system 著者 Xiao, Y, Feng, Y. 登録日 2023-08-04 公開日 2024-08-21 最終更新日 2024-09-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of HgmTad2 complexed with 1',2'-cADPR To Be Published
5LHA	Amine transaminase crystal structure from an uncultivated Pseudomonas species in the PMP-bound form 分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, OMEGA TRANSAMINASE 著者 Reddem, E, Thunnissen, A.M.W.H. 登録日 2016-07-10 公開日 2017-03-22 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Explaining Operational Instability of Amine Transaminases: Substrate-Induced Inactivation Mechanism and Influence of Quaternary Structure on Enzyme-Cofactor Intermediate Stability. Acs Catalysis, 7, 2017
8KBG	Structure of CbTad1 complexed with 2',3'-cGAMP 分子名称: Thoeris anti-defense 1, cGAMP 著者 Xiao, Y, Feng, Y. 登録日 2023-08-04 公開日 2024-08-21 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Structure of CbTad1 complexed with 2',3'-cGAMP To Be Published
7OG8	Wild-type Hfq protein from Neisseria meningitidis 分子名称: RNA-binding protein Hfq 著者 Moche, M, Karlsson, J, Loh, E. 登録日 2021-05-06 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal structures of wild type, Q9A and R17A single mutant Hfq structures from Neisseria meningitidis To Be Published

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