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1NKU
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NMR Solution Structure of Zinc-binding protein 3-methyladenine DNA glycosylase I (TAG)
分子名称: 3-Methyladenine Dna Glycosylase I (TAG), ZINC ION
著者Kwon, K, Cao, C, Stivers, J.T.
登録日2003-01-03
公開日2003-06-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A Novel Zinc Snap Motif Conveys Structural Stability to 3-Methyladenine DNA Glycosylase I
J.Biol.Chem., 278, 2003
8QNN
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Crystal structure of a Class A beta-lactamase from Nocardia cyriacigeorgica
分子名称: Beta-lactamase, CITRATE ANION
著者Feuillard, J, Couston, J, Benito, Y, Hodille, E, Dumitrescu, O, Blaise, M.
登録日2023-09-27
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Biochemical and structural characterization of a class A beta-lactamase from Nocardia cyriacigeorgica.
Acta Crystallogr.,Sect.F, 80, 2024
6EA8
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Structure of VACV poxin in pre-reactive state with nonhydrolyzable 2'3' cGAMP
分子名称: (2S,5R,7R,8R,10R,12aR,14R,15R,15aS,16R)-7-(2-amino-6-oxo-3,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-15,16-dihydroxy-2,10-disulfanyloctahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione, O-[(1R,2R,3R)-5-{[(S)-{[(2R,3R,4R,5R)-2-(2-amino-6-oxo-3,6-dihydro-9H-purin-9-yl)-4-hydroxy-5-(hydroxymethyl)tetrahydro furan-3-yl]oxy}(sulfanyl)phosphoryl]oxy}-1-(6-amino-9H-purin-9-yl)-1,2-dihydroxypentan-3-yl] dihydrogen (R)-phosphorothioate, Protein B2
著者Eaglesham, J.B, Kranzusch, P.J.
登録日2018-08-02
公開日2019-02-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Viral and metazoan poxins are cGAMP-specific nucleases that restrict cGAS-STING signalling.
Nature, 566, 2019
6IFA
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Structure of beta-trefoil lectin from Entamoeba histolytica
分子名称: GLYCEROL, ISOPROPYL ALCOHOL, lectin
著者Suguna, K, Khan, F.
登録日2018-09-19
公開日2019-09-25
最終更新日2020-04-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of a beta-trefoil lectin from Entamoeba histolytica in monomeric and a novel disulphide bond-mediated dimeric forms.
Glycobiology, 2020
6EC2
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BU of 6ec2 by Molmil
Structure of HIV-1 CA 1/3-hexamer
分子名称: ACETATE ION, Capsid protein p24
著者Summers, B.J, Xiong, Y.
登録日2018-08-07
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Modular HIV-1 Capsid Assemblies Reveal Diverse Host-Capsid Recognition Mechanisms.
Cell Host Microbe, 26, 2019
6ECO
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Hexamer-2-Foldon HIV-1 capsid platform
分子名称: HIV-1 capsid platform protein
著者Summers, B.J, Xiong, Y.
登録日2018-08-08
公開日2019-09-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Modular HIV-1 Capsid Assemblies Reveal Diverse Host-Capsid Recognition Mechanisms.
Cell Host Microbe, 26, 2019
6INW
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BU of 6inw by Molmil
A Pericyclic Reaction enzyme
分子名称: O-methyltransferase lepI, S-ADENOSYLMETHIONINE
著者Feng, Y, Chang, M, Wang, H, Liu, Z, Zhou, Y.
登録日2018-10-28
公開日2019-07-03
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Crystal structure of the multifunctional SAM-dependent enzyme LepI provides insights into its catalytic mechanism.
Biochem.Biophys.Res.Commun., 515, 2019
6IUD
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Structure of Helicobacter pylori Soj-ADP complex bound to DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3'), DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3'), ...
著者Yen, C.Y, Chu, C.H, Sun, Y.J.
登録日2018-11-28
公開日2019-02-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.506 Å)
主引用文献Crystal structures of HpSoj-DNA complexes and the nucleoid-adaptor complex formation in chromosome segregation.
Nucleic Acids Res., 47, 2019
6EA6
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Structure of VACV poxin 2'3' cGAMP-specific nuclease
分子名称: Protein B2
著者Eaglesham, J.B, Kranzusch, P.J.
登録日2018-08-02
公開日2019-02-06
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献Viral and metazoan poxins are cGAMP-specific nucleases that restrict cGAS-STING signalling.
Nature, 566, 2019
6EDI
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BU of 6edi by Molmil
Crystal structure of Leishmania braziliensis glucokinase
分子名称: Glucokinase
著者Buechner, G.S, Millington, M.E, Perry, K, D'Antonio, E.L.
登録日2018-08-09
公開日2018-08-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The crystal structure of glucokinase from Leishmania braziliensis.
Mol. Biochem. Parasitol., 227, 2019
6EAC
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Pseudomonas syringae SelO
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A.
登録日2018-08-02
公開日2018-10-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.269 Å)
主引用文献Protein AMPylation by an Evolutionarily Conserved Pseudokinase.
Cell, 175, 2018
6E8G
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CryoEM reconstruction of IST1-CHMP1B copolymer filament bound to ssDNA at 2.9 Angstrom resolution
分子名称: Charged multivesicular body protein 1b, IST1 homolog
著者Talledge, N, Frost, A, McCullough, J.
登録日2018-07-29
公開日2018-08-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The ESCRT-III proteins IST1 and CHMP1B assemble around nucleic acids
Biorxiv, 2018
6E2X
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Mechanism of cellular recognition by PCV2
分子名称: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
著者Khayat, R, Dhindwal, S.
登録日2018-07-12
公開日2018-12-26
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
6ENG
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BU of 6eng by Molmil
Crystal structure of the 43K ATPase domain of Escherichia coli gyrase B in complex with an aminocoumarin
分子名称: CHLORIDE ION, Coumermycin A1, DNA gyrase subunit B, ...
著者Vanden Broeck, A, McEwen, A.G, Lamour, V.
登録日2017-10-04
公開日2019-04-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis for DNA Gyrase Interaction with Coumermycin A1.
J.Med.Chem., 62, 2019
1WL4
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BU of 1wl4 by Molmil
Human cytosolic acetoacetyl-CoA thiolase complexed with CoA
分子名称: COENZYME A, GLYCEROL, SULFATE ION, ...
著者Kursula, P, Fukao, T, Kondo, N, Wierenga, R.K.
登録日2004-06-20
公開日2005-03-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献High Resolution Crystal Structures of Human Cytosolic Thiolase (CT): A Comparison of the Active Sites of Human CT, Bacterial Thiolase, and Bacterial KAS I
J.Mol.Biol., 347, 2005
6EP8
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InhA Y158F mutant in complex with NADH from Mycobacterium tuberculosis
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Enoyl-[acyl-carrier-protein] reductase [NADH], GLYCEROL, ...
著者Wagner, T, Voegeli, B, Rosenthal, R.G, Stoffel, G, Shima, S, Kiefer, P, Cortina, N, Erb, T.J.
登録日2017-10-11
公開日2018-09-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献InhA, the enoyl-thioester reductase fromMycobacterium tuberculosisforms a covalent adduct during catalysis.
J. Biol. Chem., 293, 2018
3WJ2
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BU of 3wj2 by Molmil
Crystal structure of ESTFA (FE-lacking apo form)
分子名称: Carboxylesterase
著者Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
登録日2013-10-03
公開日2014-07-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014
1BU8
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RAT PANCREATIC LIPASE RELATED PROTEIN 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (PANCREATIC LIPASE RELATED PROTEIN 2)
著者Roussel, A, Cambillau, C.
登録日1998-09-14
公開日1998-12-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and activity of rat pancreatic lipase-related protein 2.
J.Biol.Chem., 273, 1998
3IJW
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Crystal structure of BA2930 in complex with CoA
分子名称: ACETYL COENZYME *A, Aminoglycoside N3-acetyltransferase, CHLORIDE ION, ...
著者Klimecka, M.M, Chruszcz, M, Skarina, T, Onopryienko, O, Cymborowski, M, Savchenko, A, Edwards, A, Anderson, W, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-08-05
公開日2009-10-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of a Putative Aminoglycoside N-Acetyltransferase from Bacillus anthracis.
J.Mol.Biol., 410, 2011
6F25
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Crystal structure of human acetylcholinesterase in complex with C35.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Dias, J, Nachon, F.
登録日2017-11-23
公開日2018-12-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.05199647 Å)
主引用文献New evidence for dual binding site inhibitors of acetylcholinesterase as improved drugs for treatment of Alzheimer's disease.
Neuropharmacology, 155, 2019
3WU8
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Spatiotemporal development of soaked protein crystal; derivative 1080 sec
分子名称: Lysozyme C, PLATINUM (IV) ION
著者Mizutani, R, Saiga, R.
登録日2014-04-23
公開日2014-07-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Spatiotemporal development of soaked protein crystal
Sci Rep, 4, 2014
3WTR
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Crystal structure of E. coli YfcM bound to Co(II)
分子名称: COBALT (II) ION, Uncharacterized protein
著者Kobayashi, K, Ishii, R, Ishitani, R, Nureki, O.
登録日2014-04-19
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The non-canonical hydroxylase structure of YfcM reveals a metal ion-coordination motif required for EF-P hydroxylation
Nucleic Acids Res., 42, 2014
6EUN
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Crystal structure of Neisseria meningitidis vaccine antigen NadA variant 3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, ...
著者Dello Iacono, L, Liguori, A, Malito, E, Bottomley, M.J.
登録日2017-10-30
公開日2018-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献NadA3 Structures Reveal Undecad Coiled Coils and LOX1 Binding Regions Competed by Meningococcus B Vaccine-Elicited Human Antibodies.
MBio, 9, 2018
3WPK
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SPATIOTEMPORAL DEVELOPMENT of SOAKED PROTEIN CRYSTAL; 750 SEC
分子名称: Lysozyme C, PLATINUM (IV) ION
著者Mizutani, R, Saiga, R.
登録日2014-01-12
公開日2014-07-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Spatiotemporal development of soaked protein crystal
Sci Rep, 4, 2014
3WU7
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Spatiotemporal development of soaked protein crystal; derivative 250 sec
分子名称: Lysozyme C, PLATINUM (IV) ION
著者Mizutani, R, Saiga, R.
登録日2014-04-23
公開日2014-07-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Spatiotemporal development of soaked protein crystal
Sci Rep, 4, 2014

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