Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3CL7
DownloadVisualize
BU of 3cl7 by Molmil
Crystal structure of Puue Allantoinase in complex with Hydantoin
分子名称: Puue Allantoinase, imidazolidine-2,4-dione
著者Ramazzina, I, Cendron, L, Folli, C, Berni, R, Monteverdi, D, Zanotti, G, Percudani, R.
登録日2008-03-18
公開日2008-06-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases
J.Biol.Chem., 283, 2008
6EMK
DownloadVisualize
BU of 6emk by Molmil
Cryo-EM Structure of Saccharomyces cerevisiae Target of Rapamycin Complex 2
分子名称: Serine/threonine-protein kinase TOR2, Target of rapamycin complex 2 subunit AVO1, Target of rapamycin complex 2 subunit AVO2, ...
著者Karuppasamy, M, Kusmider, B, Oliveira, T.M, Gaubitz, C, Prouteau, M, Loewith, R, Schaffitzel, C.
登録日2017-10-02
公開日2017-12-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Cryo-EM structure of Saccharomyces cerevisiae target of rapamycin complex 2.
Nat Commun, 8, 2017
3CLO
DownloadVisualize
BU of 3clo by Molmil
Crystal structure of putative transcriptional regulator containing a LuxR DNA binding domain (NP_811094.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.04 A resolution
分子名称: CHLORIDE ION, GLYCEROL, SODIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2008-03-19
公開日2008-04-01
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Crystal structure of putative transcriptional regulator containing a LuxR DNA binding domain (NP_811094.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.04 A resolution
To be published
7S48
DownloadVisualize
BU of 7s48 by Molmil
PAK4cat in complex with Integrin beta5 760-770 peptide
分子名称: Integrin beta-5, Serine/threonine-protein kinase PAK 4
著者Ha, B.H, Boggon, T.J.
登録日2021-09-08
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4)
Commun Biol, 5, 2022
7S6V
DownloadVisualize
BU of 7s6v by Molmil
Leishmania infantum Glycogen Synthase Kinase 3 beta bound to CGP60474
分子名称: 1,2-ETHANEDIOL, 3-({4-[2-(3-chloroanilino)pyrimidin-4-yl]pyridin-2-yl}amino)propan-1-ol, Glycogen synthase kinase 3, ...
著者dos Reis, C.V, Ramos, P.Z, Counago, R.M.
登録日2021-09-15
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Leishmania infantum Glycogen Synthase Kinase 3 beta bound to CGP60474
To Be Published
5KO0
DownloadVisualize
BU of 5ko0 by Molmil
Human Islet Amyloid Polypeptide Segment 15-FLVHSSNNFGA-25 Determined by MicroED
分子名称: THIOCYANATE ION, hIAPP(15-25)WT
著者Krotee, P.A.L, Rodriguez, J.A, Sawaya, M.R, Cascio, D, Shi, D, Nannenga, B.L, Hattne, J, Reyes, F.E, Gonen, T, Eisenberg, D.S.
登録日2016-06-28
公開日2016-12-21
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.4 Å)
主引用文献Atomic structures of fibrillar segments of hIAPP suggest tightly mated beta-sheets are important for cytotoxicity.
Elife, 6, 2017
3CM7
DownloadVisualize
BU of 3cm7 by Molmil
Crystal Structure of XIAP-BIR3 domain in complex with Smac-mimetic compuond, Smac005
分子名称: (3S,6S,7S,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-N-(diphenylmethyl)-7-(hydroxymethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide, Baculoviral IAP repeat-containing protein 4, ZINC ION
著者Mastrangelo, E, Cossu, F, Milani, M.
登録日2008-03-21
公開日2008-10-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Targeting the X-linked inhibitor of apoptosis protein through 4-substituted azabicyclo[5.3.0]alkane smac mimetics. Structure, activity, and recognition principles.
J.Mol.Biol., 384, 2008
8SSC
DownloadVisualize
BU of 8ssc by Molmil
Full-Length Methionine synthase from Thermus thermophilus HB8
分子名称: Methionine synthase, POTASSIUM ION, SULFATE ION
著者Yamada, K, Mendoza, J, Koutmos, M.
登録日2023-05-08
公開日2023-10-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo.
Nat Commun, 14, 2023
7S46
DownloadVisualize
BU of 7s46 by Molmil
PAK4cat (D440N/S474E) in complex with Integrin beta5 760-770 peptide
分子名称: Integrin beta-5, Isoform 2 of Serine/threonine-protein kinase PAK 4, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Ha, B.H, Boggon, T.J.
登録日2021-09-08
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4)
Commun Biol, 5, 2022
3D4N
DownloadVisualize
BU of 3d4n by Molmil
Crystal Structure of Human 11-beta-Hydroxysteroid Dehydrogenase (HSD1) in Complex with Sulfonamide Inhibitor
分子名称: 1-{[(3R)-3-methyl-4-({4-[(1S)-2,2,2-trifluoro-1-hydroxy-1-methylethyl]phenyl}sulfonyl)piperazin-1-yl]methyl}cyclopropanecarboxamide, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Wang, Z, Liu, J, Sudom, A, Walker, N.P.
登録日2008-05-14
公開日2008-07-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of Novel, Potent Benzamide Inhibitors of 11beta-Hydroxysteroid Dehydrogenase Type 1 (11beta-HSD1) Exhibiting Oral Activity in an Enzyme Inhibition ex Vivo Model
J.Med.Chem., 51, 2008
3CMP
DownloadVisualize
BU of 3cmp by Molmil
Crystal structure of Siderocalin (NGAL, Lipocalin 2) K125A mutant complexed with Ferric Enterobactin
分子名称: 2,3-DIHYDROXY-BENZOIC ACID, FE (III) ION, GLYCEROL, ...
著者Clifton, M.C, Strong, R.K.
登録日2008-03-24
公開日2009-05-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands
To be Published
3D51
DownloadVisualize
BU of 3d51 by Molmil
GOLGI MANNOSIDASE II complex with gluco-hydroxyiminolactam
分子名称: (2S,3S,4R,5R)-6-(HYDROXYAMINO)-2-(HYDROXYMETHYL)-2,3,4,5-TETRAHYDROPYRIDINE-3,4,5-TRIOL, (4R)-2-METHYLPENTANE-2,4-DIOL, Alpha-mannosidase 2, ...
著者Kuntz, D.A, Tarling, C.A, Withers, S.G, Rose, D.R.
登録日2008-05-15
公開日2008-08-05
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural analysis of Golgi alpha-mannosidase II inhibitors identified from a focused glycosidase inhibitor screen.
Biochemistry, 47, 2008
6ITL
DownloadVisualize
BU of 6itl by Molmil
Crystal structure of malate dehydrogenase from Mannheimia succiniciproducens in complex with NAD
分子名称: GLYCEROL, Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Seo, H, Kim, K.-J.
登録日2018-11-23
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Enhanced succinic acid production by Mannheimia employing optimal malate dehydrogenase.
Nat Commun, 11, 2020
3CMY
DownloadVisualize
BU of 3cmy by Molmil
Structure of a homeodomain in complex with DNA
分子名称: 1,2-ETHANEDIOL, 5'-D(*DAP*DCP*DAP*DTP*DAP*DAP*DP*DCP*DGP*DAP*DTP*DTP*DAP*DC)-3', 5'-D(*DTP*DGP*DTP*DAP*DAP*DTP*DCP*DGP*DAP*DTP*DTP*DAP*DTP*DG)-3', ...
著者Birrane, G, Ladias, J.A.A, Soni, A.
登録日2008-03-24
公開日2009-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Basis for DNA Recognition by the Human PAX3 Homeodomain.
Biochemistry, 48, 2009
3CN3
DownloadVisualize
BU of 3cn3 by Molmil
Human transthyretin (TTR) in complex with 1,3-Dibromo-2-hydroxy-5-phenoxybenzene
分子名称: 2,6-dibromo-4-phenoxyphenol, Transthyretin
著者Connelly, S, Wilson, I.A.
登録日2008-03-24
公開日2008-10-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Toward optimization of the linker substructure common to transthyretin amyloidogenesis inhibitors using biochemical and structural studies.
J.Med.Chem., 51, 2008
6EOP
DownloadVisualize
BU of 6eop by Molmil
DPP8 - SLRFLYEG, space group 20
分子名称: CALCIUM ION, CITRATE ANION, Dipeptidyl peptidase 8, ...
著者Ross, B.R, Huber, R.
登録日2017-10-10
公開日2018-02-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures and mechanism of dipeptidyl peptidases 8 and 9, important players in cellular homeostasis and cancer.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3D6G
DownloadVisualize
BU of 3d6g by Molmil
Fc fragment of IgG1 (Herceptin) with protein-A mimetic peptide dendrimer ligand.
分子名称: 2-[[(2S)-2,6-bis[[(2S)-2,6-bis[[(2R)-2-[[(2R,3R)-2-[[(2R)-2-amino-5-carbamimidamido-pentanoyl]amino]-3-hydroxy-butanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]hexanoyl]amino]hexanoyl]amino]ethanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
著者Bujacz, A.D, Redzynia, I, Bujacz, G.D, Dinon, F, Pengo, P, Fassina, G.
登録日2008-05-19
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of a Protein A mimetic peptide dendrimer bound to human IgG.
J.Phys.Chem.B, 113, 2009
6ITY
DownloadVisualize
BU of 6ity by Molmil
CTX-M-64 sulbactam complex
分子名称: ACRYLIC ACID, Beta-lactamase, TRANS-ENAMINE INTERMEDIATE OF SULBACTAM
著者Cheng, Q, Chen, S.
登録日2018-11-26
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structural Insight into the Mechanism of Inhibitor Resistance in CTX-M-199, a CTX-M-64 Variant Carrying the S130T Substitution.
Acs Infect Dis., 6, 2020
5KUK
DownloadVisualize
BU of 5kuk by Molmil
Crystal Structure of Inward Rectifier Kir2.2 K62W Mutant
分子名称: ATP-sensitive inward rectifier potassium channel 12, DECYL-BETA-D-MALTOPYRANOSIDE, POTASSIUM ION
著者Lee, S.-J, Ren, F, Heyman, S, Yuan, P, Nichols, C.G.
登録日2016-07-13
公開日2016-08-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of control of inward rectifier Kir2 channel gating by bulk anionic phospholipids.
J.Gen.Physiol., 148, 2016
3D77
DownloadVisualize
BU of 3d77 by Molmil
Crystal structure of a pheromone binding protein mutant D35N, from Apis mellifera, soaked at pH 4.0
分子名称: 1,2-ETHANEDIOL, N-BUTYL-BENZENESULFONAMIDE, Pheromone-binding protein ASP1, ...
著者Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
登録日2008-05-20
公開日2009-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release
J.Mol.Biol., 390, 2009
3CNO
DownloadVisualize
BU of 3cno by Molmil
GDP-bound structue of TM YlqF
分子名称: GUANOSINE-5'-DIPHOSPHATE, Putative uncharacterized protein
著者Kim, D.J, Jang, J.Y, Yoon, H.-J, Suh, S.W.
登録日2008-03-26
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of YlqF, a circularly permuted GTPase: Implications for its GTPase activation in 50 S ribosomal subunit assembly
Proteins, 72, 2008
6ENV
DownloadVisualize
BU of 6env by Molmil
X-ray structure of Au2phen-encapsulated horse spleen apoferritin
分子名称: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
著者Ferraro, G, Merlino, A.
登録日2017-10-06
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Ferritin nanocages loaded with gold ions induce oxidative stress and apoptosis in MCF-7 human breast cancer cells.
Dalton Trans, 46, 2017
3D7I
DownloadVisualize
BU of 3d7i by Molmil
Crystal structure of carboxymuconolactone decarboxylase family protein possibly involved in oxygen detoxification (1591455) from METHANOCOCCUS JANNASCHII at 1.75 A resolution
分子名称: SULFATE ION, TETRAETHYLENE GLYCOL, carboxymuconolactone decarboxylase family protein
著者Joint Center for Structural Genomics (JCSG)
登録日2008-05-21
公開日2008-07-15
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of carboxymuconolactone decarboxylase family protein possibly involved in oxygen detoxification (1591455) from METHANOCOCCUS JANNASCHII at 1.75 A resolution
To be published
6EPB
DownloadVisualize
BU of 6epb by Molmil
Structure of Chitinase 42 from Trichoderma harzianum
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Endochitinase 42, ...
著者Ramirez-Escudero, M, Jimenez-Ortega, E, Sanz-Aparicio, J.
登録日2017-10-11
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Use of chitin and chitosan to produce new chitooligosaccharides by chitinase Chit42: enzymatic activity and structural basis of protein specificity.
Microb. Cell Fact., 17, 2018
3CNV
DownloadVisualize
BU of 3cnv by Molmil
Crystal structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica
分子名称: CHLORIDE ION, CITRATE ANION, Putative GntR-family transcriptional regulator
著者Zimmerman, M.D, Xu, X, Cui, H, Filippova, E.V, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2008-03-26
公開日2008-04-29
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica.
To be Published

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon