Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YA1
DownloadVisualize
BU of 6ya1 by Molmil
Zinc metalloprotease ProA
分子名称: ACETATE ION, CALCIUM ION, ZINC ION, ...
著者Schmelz, S, Blankenfeldt, W.
登録日2020-03-11
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Zinc metalloprotease ProA of Legionella pneumophila increases alveolar septal thickness in human lung tissue explants by collagen IV degradation.
Cell.Microbiol., 23, 2021
5KR6
DownloadVisualize
BU of 5kr6 by Molmil
Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
分子名称: 4-aminobutyrate transaminase, PYRIDOXAL-5'-PHOSPHATE
著者Wilding, M, Newman, J, Peat, T.S, Scott, C.
登録日2016-07-07
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Green Chemistry, 19, 2017
5HGI
DownloadVisualize
BU of 5hgi by Molmil
Crystal structure of apo human IRE1 alpha
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BETA-MERCAPTOETHANOL, CESIUM ION, ...
著者Feldman, H.C, Tong, M, Wang, L, Meza-Acevedo, R, Gobillot, T.A, Gliedt, J.M, Hari, S.B, Mitra, A.K, Backes, B.J, Papa, F.R, Seeliger, M.A, Maly, D.J.
登録日2016-01-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.584 Å)
主引用文献Structural and Functional Analysis of the Allosteric Inhibition of IRE1 alpha with ATP-Competitive Ligands.
Acs Chem.Biol., 11, 2016
6G4C
DownloadVisualize
BU of 6g4c by Molmil
Crystal structure of the omega transaminase from Pseudomonas jessenii in the apo form, crystallized from ammonium phosphate
分子名称: Aspartate aminotransferase family protein, PHOSPHATE ION
著者Rozeboom, H.J, Janssen, D.B.
登録日2018-03-27
公開日2019-04-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Biochemical properties of a Pseudomonas aminotransferase involved in caprolactam metabolism.
Febs J., 286, 2019
6YAA
DownloadVisualize
BU of 6yaa by Molmil
Structure of the (SR) Ca2+-ATPase bound to the inhibitor compound CAD204520 and TNP-ATP
分子名称: 4-[2-[(2~{R})-2-[3-propyl-6-(trifluoromethyloxy)-1~{H}-indol-2-yl]piperidin-1-yl]ethyl]morpholine, POTASSIUM ION, SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O',3O'-METHYLENE-ADENINE-TRIPHOSPHATE, ...
著者Heit, S, Marchesini, M, Gherli, A, Montanaro, A, Patrizi, L, Sorrentino, C, Pagliaro, L, Rompietti, C, Kitara, S, Olesen, C.E, Moller, J.V, Savi, M, Bocchi, L, Vilella, R, Rizzi, F, Baglione, M, Rastelli, G, Loiacona, C, La Starza, R, Mecucci, C, Stegmair, K, Aversa, F, Stilli, D, Lund Winther, A.M, Sportoletti, P, Dalby-Brown, W, Roti, G, Bublitz, M.
登録日2020-03-11
公開日2020-05-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Blockade of Oncogenic NOTCH1 with the SERCA Inhibitor CAD204520 in T Cell Acute Lymphoblastic Leukemia.
Cell Chem Biol, 27, 2020
5KRD
DownloadVisualize
BU of 5krd by Molmil
Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and 2-iodophenol (2IP)
分子名称: 2-iodanylphenol, FLAVIN MONONUCLEOTIDE, Nitroreductase
著者Ingavat, N, Kavran, J.M, Sun, Z, Rokita, S.
登録日2016-07-07
公開日2017-02-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.103 Å)
主引用文献Active Site Binding Is Not Sufficient for Reductive Deiodination by Iodotyrosine Deiodinase.
Biochemistry, 56, 2017
6V0Y
DownloadVisualize
BU of 6v0y by Molmil
immune receptor complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fibrinogen beta 72,74cit69-81, GLYCEROL, ...
著者Lim, J.J, Rossjohn, J.
登録日2019-11-19
公開日2020-11-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The shared susceptibility epitope of HLA-DR4 binds citrullinated self-antigens and the TCR.
Sci Immunol, 6, 2021
5HL9
DownloadVisualize
BU of 5hl9 by Molmil
E. coli PBP1b in complex with acyl-ampicillin and moenomycin
分子名称: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, MOENOMYCIN, Penicillin-binding protein 1B
著者King, D.T, Strynadka, N.C.J.
登録日2016-01-14
公開日2016-12-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Insights into Inhibition of Escherichia coli Penicillin-binding Protein 1B.
J.Biol.Chem., 292, 2017
5CYS
DownloadVisualize
BU of 5cys by Molmil
Structure of the enzyme-product complex resulting from TDG action on a GcaC mismatch
分子名称: ACETIC ACID, DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase
著者Pozharski, E, Malik, S.S, Drohat, A.C.
登録日2015-07-30
公開日2015-09-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Characterizing the enzyme-product complexes of thymine DNA glycosylase using crystallography and NMR
Nucleic Acids Res., 2015
6PAQ
DownloadVisualize
BU of 6paq by Molmil
Structure of a bacterial Atm1-family ABC exporter with ATP bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATM1-type heavy metal exporter
著者Fan, C, Kaiser, J.T, Rees, D.C.
登録日2019-06-11
公開日2020-06-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献A structural framework for unidirectional transport by a bacterial ABC exporter.
Proc.Natl.Acad.Sci.USA, 117, 2020
8KBB
DownloadVisualize
BU of 8kbb by Molmil
Structure of apo-CmTad1
分子名称: Thoeris anti-defense 1, ZINC ION
著者Xiao, Y, Feng, Y.
登録日2023-08-04
公開日2024-08-07
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Single phage proteins sequester signals from TIR and CGAS-like enzymes
Nature, 2024
6Y6Z
DownloadVisualize
BU of 6y6z by Molmil
Structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3) in complex with Compound 1
分子名称: GLYCEROL, Peptidoglycan D,D-transpeptidase FtsI, ~{tert}-butyl ~{N}-[(2~{S})-2-methyl-4-oxidanyl-1-oxidanylidene-pent-4-en-2-yl]carbamate
著者Newman, H, Bellini, D, Dowson, C.G.
登録日2020-02-27
公開日2020-06-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Demonstration of the utility of DOS-derived fragment libraries for rapid hit derivatisation in a multidirectional fashion.
Chem Sci, 11, 2020
6PB9
DownloadVisualize
BU of 6pb9 by Molmil
Crystal structure of unsaturated fatty acid bound ToxT K231A from Vibrio cholerae strain SCE256
分子名称: PALMITOLEIC ACID, Toxin co-regulated pilus virulence regulatory protein
著者Cruite, J.T, Kull, F.J.
登録日2019-06-13
公開日2020-01-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.109 Å)
主引用文献Structural basis for virulence regulation inVibrio choleraeby unsaturated fatty acid components of bile.
Commun Biol, 2, 2019
6MIC
DownloadVisualize
BU of 6mic by Molmil
Crystal Structure of the C-terminal half of the Vibrio cholerae minor pilin TcpB
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Toxin co-regulated pilus biosynthesis protein B
著者Kolappan, S, Craig, L.
登録日2018-09-19
公開日2019-08-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.531 Å)
主引用文献TheVibrio choleraeminor pilin TcpB mediates uptake of the cholera toxin phage CTX phi.
J.Biol.Chem., 294, 2019
6MIK
DownloadVisualize
BU of 6mik by Molmil
Crystal structure of host-guest complex with PP hachimoji DNA
分子名称: DNA (5'-D(*CP*TP*TP*AP*TP*(1WA)P*(1WA)P*(DS))-3'), DNA (5'-D(P*(DB)P*(1W5)P*(1W5)P*AP*TP*AP*AP*G)-3'), N-terminal fragment of MMLV reverse transcriptase
著者Georgiadis, M.M.
登録日2018-09-19
公開日2019-02-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Hachimoji DNA and RNA: A genetic system with eight building blocks.
Science, 363, 2019
8KA6
DownloadVisualize
BU of 8ka6 by Molmil
De novo design protein -NA7
分子名称: De novo design protein -NA7
著者Wang, S, Liu, Y.
登録日2023-08-02
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献De novo design protein -NA7
To Be Published
6MIG
DownloadVisualize
BU of 6mig by Molmil
Crystal structure of host-guest complex with PB hachimoji DNA
分子名称: DNA (5'-D(*CP*TP*TP*AP*TP*(1WA)P*(1WA)P*(DS))-3'), DNA (5'-D(P*(DB)P*(1W5)P*(1W5)P*AP*TP*AP*AP*G)-3'), Gag-Pol polyprotein
著者Georgiadis, M.M.
登録日2018-09-19
公開日2019-02-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Hachimoji DNA and RNA: A genetic system with eight building blocks.
Science, 363, 2019
6UVX
DownloadVisualize
BU of 6uvx by Molmil
The crystal structure of FbiA from Mycobacterium Smegmatis, Apo state
分子名称: CALCIUM ION, Phosphoenolpyruvate transferase
著者Grinter, R, Gillett, D, Cordero, P.R.F, Greening, C.
登録日2019-11-04
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cellular and Structural Basis of Synthesis of the Unique Intermediate Dehydro-F420-0 in Mycobacteria.
mSystems, 5, 2020
6UW5
DownloadVisualize
BU of 6uw5 by Molmil
The crystal structure of FbiA from Mycobacterium smegmatis, GDP and Fo bound form
分子名称: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Grinter, R, Gillett, D, Cordero, P.R.F, Greening, C.
登録日2019-11-04
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cellular and Structural Basis of Synthesis of the Unique Intermediate Dehydro-F420-0 in Mycobacteria.
mSystems, 5, 2020
6PCC
DownloadVisualize
BU of 6pcc by Molmil
Crystal structure of beta-ketoadipyl-CoA thiolase mutant (H356A) in complex hexanoyl coenzyme A
分子名称: Beta-ketoadipyl-CoA thiolase, COENZYME A, GLYCEROL, ...
著者Sukritee, B, Panjikar, S.
登録日2019-06-17
公開日2020-05-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural basis for differentiation between two classes of thiolase: Degradative vs biosynthetic thiolase.
J Struct Biol X, 4, 2020
8KBK
DownloadVisualize
BU of 8kbk by Molmil
Structure of AcrIIA7 complexed with 1',2'-cADPR and cGG
分子名称: (1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-amino-9H-purin-9-yl)-9,11,15,16,18-pentahydroxy-2,5,8,10,12,17-hexaoxa-9lambda~5~,11lambda~5~-diphosphatricyclo[12.2.1.1~3,6~]octadecane-9,11-dione, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Inhibitor of Type II CRISPR-Cas system
著者Xiao, Y, Feng, Y.
登録日2023-08-04
公開日2024-08-07
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Single phage proteins sequester signals from TIR and CGAS-like enzymes
Nature, 2024
5HHX
DownloadVisualize
BU of 5hhx by Molmil
Inhibiting complex IL-17A and IL-17RA interactions with a linear peptide
分子名称: CAT-2000 FAB heavy chain, CAT-2000 FAB light chain, IL-17A peptide inhibitor, ...
著者Liu, S.
登録日2016-01-11
公開日2016-06-01
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Inhibiting complex IL-17A and IL-17RA interactions with a linear peptide.
Sci Rep, 6, 2016
6YB7
DownloadVisualize
BU of 6yb7 by Molmil
SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19).
分子名称: 3C-like proteinase, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE
著者Owen, C.D, Lukacik, P, Strain-Damerell, C.M, Douangamath, A, Powell, A.J, Fearon, D, Brandao-Neto, J, Crawshaw, A.D, Aragao, D, Williams, M, Flaig, R, Hall, D.R, McAuley, K.E, Mazzorana, M, Stuart, D.I, von Delft, F, Walsh, M.A.
登録日2020-03-16
公開日2020-03-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献COVID-19 main protease with unliganded active site
To Be Published
6V2O
DownloadVisualize
BU of 6v2o by Molmil
HLA-B*57:01 presenting the peptide ASLNLPAVSW
分子名称: ACETATE ION, Beta-2-microglobulin, MHC class I antigen, ...
著者Maclachlan, B, Rossjohn, J, Vivian, J.P.
登録日2019-11-25
公開日2020-05-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献The molecular basis of how buried human leukocyte antigen polymorphism modulates natural killer cell function.
Proc.Natl.Acad.Sci.USA, 117, 2020
8KCJ
DownloadVisualize
BU of 8kcj by Molmil
De novo design protein -N7
分子名称: De novo design protein -N7, GLYCEROL
著者Wang, S, Liu, Y.
登録日2023-08-07
公開日2024-08-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献De novo design protein -N7
To Be Published

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon