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6D7R
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BU of 6d7r by Molmil
Crystal structure of an inactivate variant of the quorum-sensing master regulator HapR from protease-deficient non-O1, non-O139 Vibrio cholerae strain V2
分子名称: Hemagglutinin/protease regulatory protein
著者Cruite, J.T, Succo, P, Raychaudhuri, S, Kull, F.J.
登録日2018-04-25
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an inactive variant of the quorum-sensing master regulator HapR from the protease-deficient non-O1, non-O139 Vibrio cholerae strain V2.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6PB4
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BU of 6pb4 by Molmil
The E. coli class-II CAP-dependent transcription activation complex with de novo RNA transcript at the state 2
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Shi, W.
登録日2019-06-13
公開日2020-03-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.35 Å)
主引用文献Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
6PB6
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BU of 6pb6 by Molmil
The E. coli class-II CAP-dependent transcription activation complex at the state 2
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Shi, W.
登録日2019-06-13
公開日2020-03-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.29 Å)
主引用文献Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
2GGM
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BU of 2ggm by Molmil
Human centrin 2 xeroderma pigmentosum group C protein complex
分子名称: CALCIUM ION, Centrin-2, DNA-repair protein complementing XP-C cells
著者Thompson, J.R.
登録日2006-03-24
公開日2006-04-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The structure of the human centrin 2-xeroderma pigmentosum group C protein complex.
J.Biol.Chem., 281, 2006
6ZTP
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BU of 6ztp by Molmil
E. coli 70S-RNAP expressome complex in uncoupled state 6
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Webster, M.W, Takacs, M, Weixlbaumer, A.
登録日2020-07-20
公開日2020-09-16
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
2FNP
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BU of 2fnp by Molmil
Crystal structure of SarA
分子名称: Staphylococcal accessory regulator A
著者Liu, Y, Manna, A.C, Pan, C.H, Cheung, A.L, Zhang, G.
登録日2006-01-11
公開日2006-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and function analyses of the global regulatory protein SarA from Staphylococcus aureus.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6L8F
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BU of 6l8f by Molmil
Crystal structure of heterotetrameric complex of YoeB-YefM toxin-antitoxin from Staphylococcus aureus.
分子名称: Antitoxin, YoeB
著者Yue, J, Xue, L.
登録日2019-11-06
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Distinct oligomeric structures of the YoeB-YefM complex provide insights into the conditional cooperativity of type II toxin-antitoxin system.
Nucleic Acids Res., 48, 2020
6PB5
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BU of 6pb5 by Molmil
The E. coli class-II CAP-dependent transcription activation complex at the state 1 architecture
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Liu, B, Shi, W.
登録日2019-06-13
公開日2020-03-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.52 Å)
主引用文献Visualization of two architectures in class-II CAP-dependent transcription activation
Plos Biol., 18, 2020
3UKI
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BU of 3uki by Molmil
Crystal structure of reduced OxyR from Porphyromonas gingivalis
分子名称: OxyR
著者Svintradze, D.V, Wright, H.T, Collazo-Santiago, E.A, Lewis, J.P.
登録日2011-11-09
公開日2013-07-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (4.15 Å)
主引用文献Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis.
Acta Crystallogr.,Sect.D, 69, 2013
7LBM
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BU of 7lbm by Molmil
Structure of the human Mediator-bound transcription pre-initiation complex
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Abdella, R, Talyzina, A, He, Y.
登録日2021-01-08
公開日2021-03-24
最終更新日2021-04-14
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure of the human Mediator-bound transcription preinitiation complex.
Science, 372, 2021
7CTG
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BU of 7ctg by Molmil
Human Origin Recognition Complex, ORC1-5 State I
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Origin recognition complex subunit 1, Origin recognition complex subunit 2, ...
著者Cheng, J, Li, N, Wang, X, Hu, J, Zhai, Y, Gao, N.
登録日2020-08-18
公開日2021-01-06
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural insight into the assembly and conformational activation of human origin recognition complex.
Cell Discov, 6, 2020
4TV7
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BU of 4tv7 by Molmil
Crystal structure of Bacillus subtilis GabR at 2.05 Angstroms resolution
分子名称: HTH-type transcriptional regulatory protein GabR
著者Goto, M, Okuda, K, Yoshimura, T.
登録日2014-06-26
公開日2014-12-24
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Role of the aminotransferase domain in Bacillus subtilis GabR, a pyridoxal 5'-phosphate-dependent transcriptional regulator
Mol. Microbiol., 95, 2015
2XIU
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BU of 2xiu by Molmil
High resolution structure of MTSL-tagged CylR2.
分子名称: CYLR2, GLYCEROL, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
著者Gruene, T, Cho, M.-K, Karyagina, I, Kim, H.-Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S.
登録日2010-07-01
公開日2011-02-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy.
J.Biomol.NMR, 49, 2011
5VVH
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BU of 5vvh by Molmil
Crystal Structure of the Effector Binding Domain of LysR-type Transcriptional Regulator, OccR from Agrobacterium tumefaciens
分子名称: FORMIC ACID, Octopine catabolism/uptake operon regulatory protein OccR, SULFATE ION
著者Kim, Y, Chhor, G, Jedrzejczak, R, Winans, S.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2017-05-19
公開日2017-06-21
最終更新日2018-09-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the Ligand-Binding Domain of a LysR-type Transcriptional Regulator: Transcriptional Activation via a Rotary Switch.
Mol. Microbiol., 2018
2XJ3
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BU of 2xj3 by Molmil
High resolution structure of the T55C mutant of CylR2.
分子名称: CYLR2 SYNONYM CYTOLYSIN REPRESSOR 2, GLYCEROL
著者Gruene, T, Cho, M.K, Karyagina, I, Kim, H.Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S.
登録日2010-07-02
公開日2011-02-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy.
J.Biomol.NMR, 49, 2011
7UBN
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BU of 7ubn by Molmil
Transcription antitermination complex: NusA-containing "engaged" Qlambda-loading complex
分子名称: Antitermination protein, DNA (52-MER), DNA (53-MER), ...
著者Yin, Z, Ebright, R.H.
登録日2022-03-15
公開日2022-09-28
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
8G6H
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BU of 8g6h by Molmil
H2BK120ub+H3K79me2-modified nucleosome ubiquitin position 6
分子名称: 601 DNA (185-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-02-15
公開日2024-02-21
最終更新日2024-08-28
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
To Be Published
1HX7
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BU of 1hx7 by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF GAMMA DELTA RESOLVASE
分子名称: TRANSPOSON GAMMA-DELTA RESOLVASE
著者Pan, B, Mullen, G.P.
登録日2001-01-11
公開日2002-01-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the catalytic domain of gammadelta resolvase. Implications for the mechanism of catalysis.
J.Mol.Biol., 310, 2001
7NFU
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BU of 7nfu by Molmil
Crystal structure of C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
分子名称: GLYCEROL, Nucleoid occlusion protein, SULFATE ION
著者Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
登録日2021-02-07
公開日2021-02-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
7NG0
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BU of 7ng0 by Molmil
Crystal structure of N- and C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
分子名称: Nucleoid occlusion protein, SULFATE ION
著者Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
登録日2021-02-08
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
8ROY
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BU of 8roy by Molmil
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
分子名称: 1-[5-[[3,4-bis(chloranyl)-1~{H}-indol-7-yl]sulfamoyl]-3-methyl-furan-2-yl]carbonyl-~{N}-methyl-piperidine-4-carboxamide, DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, ...
著者Shilliday, F, Lucas, S.C.C, Richter, M, Michaelides, I.N, Fusani, L.
登録日2024-01-12
公開日2024-04-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Optimization of Potent Ligands for the E3 Ligase DCAF15 and Evaluation of Their Use in Heterobifunctional Degraders.
J.Med.Chem., 67, 2024
8ROX
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BU of 8rox by Molmil
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12
分子名称: 5-[[3,4-bis(chloranyl)-1~{H}-indol-7-yl]sulfamoyl]-~{N},~{N},3-trimethyl-furan-2-carboxamide;ethane, DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, ...
著者Shilliday, F, Lucas, S.C.C, Richter, M, Michaelides, I.N, Fusani, L.
登録日2024-01-12
公開日2024-04-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Optimization of Potent Ligands for the E3 Ligase DCAF15 and Evaluation of Their Use in Heterobifunctional Degraders.
J.Med.Chem., 67, 2024
7EGB
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BU of 7egb by Molmil
TFIID-based holo PIC on SCP promoter
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EGC
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BU of 7egc by Molmil
p53-bound TFIID-based holo PIC on HDM2 promoter
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-12
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7ENA
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BU of 7ena by Molmil
TFIID-based PIC-Mediator holo-complex in pre-assembled state (pre-hPIC-MED)
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Chen, X, Qi, Y, Wang, X, Wu, Z, Yin, X, Li, J, Liu, W, Xu, Y.
登録日2021-04-16
公開日2021-05-26
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (4.07 Å)
主引用文献Structures of the human Mediator and Mediator-bound preinitiation complex.
Science, 372, 2021

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