PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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4PSN	Crystal structure of apeThermo-DBP-RP2 分子名称: GLYCEROL, IMIDAZOLE, ssDNA binding protein 著者 Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C. 登録日 2014-03-07 公開日 2014-04-30 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein. Nucleic Acids Res., 42, 2014
4PSL	Crystal structure of pfuThermo-DBP-RP1 (crystal form I) 分子名称: SULFATE ION, ssDNA binding protein 著者 Gahlei, H, von Moeller, H, Eppers, D, Sohmen, D, Wilson, D.N, Loll, B, Wahl, M.C. 登録日 2014-03-07 公開日 2014-04-30 最終更新日 2014-06-25 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein. Nucleic Acids Res., 42, 2014
7T8N	Crystal structure of the PNAG binding module PgaA-TPR 220-359 分子名称: CHLORIDE ION, MAGNESIUM ION, Poly-beta-1,6-N-acetyl-D-glucosamine export protein 著者 Pfoh, R, Little, D.J, Howell, P.L. 登録日 2021-12-16 公開日 2022-08-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 The TPR domain of PgaA is a multifunctional scaffold that binds PNAG and modulates PgaB-dependent polymer processing. Plos Pathog., 18, 2022
4Y1I	Lactococcus lactis yybP-ykoY Mn riboswitch bound to Mn2+ 分子名称: BARIUM ION, GUANOSINE-5'-TRIPHOSPHATE, Lactococcus lactis yybP-ykoY riboswitch, ... 著者 Price, I.R, Ke, A. 登録日 2015-02-07 公開日 2015-04-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Mn(2+)-Sensing Mechanisms of yybP-ykoY Orphan Riboswitches. Mol.Cell, 57, 2015
6V85	Parainfluenza virus 5 L-P complex 分子名称: Phosphoprotein, RNA-directed RNA polymerase L, ZINC ION 著者 Abdella, R, He, Y. 登録日 2019-12-10 公開日 2020-02-19 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.38 Å) 主引用文献 Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation. Proc.Natl.Acad.Sci.USA, 117, 2020
3OP4	Crystal structure of putative 3-ketoacyl-(acyl-carrier-protein) reductase from Vibrio cholerae O1 biovar eltor str. N16961 in complex with NADP+ 分子名称: 3-oxoacyl-[acyl-carrier protein] reductase, ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Hou, J, Chruszcz, M, Onopriyenko, O, Grimshaw, S, Porebski, P, Zheng, H, Savchenko, A, Anderson, W, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2010-08-31 公開日 2010-09-22 最終更新日 2022-04-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae. J.Bacteriol., 198, 2015
6V86	Parainfluenza virus 5 L-P complex with an alternate conformation of the CD-MTase-CTD module 分子名称: Phosphoprotein, RNA-directed RNA polymerase L, ZINC ION 著者 Abdella, R, He, Y. 登録日 2019-12-10 公開日 2020-02-19 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.63 Å) 主引用文献 Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation. Proc.Natl.Acad.Sci.USA, 117, 2020
2VGT	Crystal structure of E53QbsSHMT with glycine 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, PHOSPHATE ION, ... 著者 Rajaram, V, Bhavani, B.S, Kaul, P, Prakash, V, Appaji Rao, N, Savithri, H.S, Murthy, M.R.N. 登録日 2007-11-15 公開日 2007-12-04 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structure Determination and Biochemical Studies on Bacillus Stearothermophilus E53Q Serine Hydroxymethyltransferase and its Complexes Provide Insights on Function and Enzyme Memory FEBS J., 274, 2007
4Y9B	Crystal structure of V30M mutated transthyretin in complex with alpha-mangostin 分子名称: 1,3,6-trihydroxy-7-methoxy-2,8-bis(3-methylbut-2-en-1-yl)-9H-xanthen-9-one, CALCIUM ION, CHLORIDE ION, ... 著者 Yokoyama, T, Mizuguchi, M. 登録日 2015-02-17 公開日 2015-09-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Discovery of gamma-Mangostin as an Amyloidogenesis Inhibitor Sci Rep, 5, 2015
8SZU	Structure of Kdac1-Citarinostat complex from Acinetobacter baumannii 分子名称: Citarinostat, Histone deacetylase domain-containing protein, POTASSIUM ION, ... 著者 Watson, P.R, Christianson, D.W. 登録日 2023-05-30 公開日 2023-09-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structure and Function of Kdac1, a Class II Deacetylase from the Multidrug-Resistant Pathogen Acinetobacter baumannii . Biochemistry, 62, 2023
8SZT	Structure of Kdac1 from Acinetobacter baumannii 分子名称: CHLORIDE ION, Histone deacetylase domain-containing protein, POTASSIUM ION, ... 著者 Watson, P.R, Christianson, D.W. 登録日 2023-05-30 公開日 2023-09-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure and Function of Kdac1, a Class II Deacetylase from the Multidrug-Resistant Pathogen Acinetobacter baumannii . Biochemistry, 62, 2023
4NZF	Crystal structure of Abp-D197A (a GH27-b-L-arabinopyranosidase from Geobacillus stearothermophilus), in complex with arabinose 分子名称: Abp, a GH27 beta-L-arabinopyranosidase, CITRIC ACID, ... 著者 Lansky, S, Solomon, H.V, Salama, R, Belrhali, H, Shoham, Y, Shoham, G. 登録日 2013-12-12 公開日 2014-12-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Structure-specificity relationships in Abp, a GH27 beta-L-arabinopyranosidase from Geobacillus stearothermophilus T6 Acta Crystallogr.,Sect.D, 70, 2014
5K1N	Human TTR altered by a rhenium tris-carbonyl Pyta-C12 derivative 分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Stura, E.A, Ciccone, L, Shepard, W. 登録日 2016-05-18 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Human TTR conformation altered by rhenium tris-carbonyl derivatives. J.Struct.Biol., 195, 2016
5K7Z	Crystal structure of AibR in complex with isovaleryl coenzyme A and operator DNA 分子名称: DNA (32-MER), Isovaleryl-coenzyme A, Transcriptional regulator, ... 著者 Bock, T, Volz, C, Mueller, R, Blankenfeldt, W. 登録日 2016-05-27 公開日 2016-12-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 Crystal structure of AibR in complex with isovaleryl coenzyme A and operator DNA to be published
4L5J	Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition 分子名称: 5-O-phosphono-alpha-D-ribofuranose, Transcriptional regulator LsrR 著者 Ryu, K.S, Ha, J.H, Eo, Y. 登録日 2013-06-11 公開日 2013-11-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structures of the LsrR Proteins Complexed with Phospho-AI-2 and Two Signal-Interrupting Analogues Reveal Distinct Mechanisms for Ligand Recognition. J.Am.Chem.Soc., 135, 2013
3DID	Crystal structure of the F87M/L110M mutant of human transthyretin at pH 4.6 soaked 分子名称: ACETATE ION, GLYCEROL, Transthyretin, ... 著者 Palmieri, L.C, Freire, J.B.B, Foguel, D, Lima, L.M.T.R. 登録日 2008-06-20 公開日 2008-07-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition. J.Biol.Chem., 285, 2010
5U05	Cryo-EM structure of the E. coli CTP synthase tetramer 分子名称: CTP synthase 著者 Lynch, E.M, Hicks, D.R, Kollman, J.M. 登録日 2016-11-22 公開日 2017-04-26 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Human CTP synthase filament structure reveals the active enzyme conformation. Nat. Struct. Mol. Biol., 24, 2017
4Y9C	Crystal structure of V30M mutated transthyretin with bromide in complex with alpha-mangostin 分子名称: 1,3,6-trihydroxy-7-methoxy-2,8-bis(3-methylbut-2-en-1-yl)-9H-xanthen-9-one, BROMIDE ION, Transthyretin 著者 Yokoyama, T, Mizuguchi, M. 登録日 2015-02-17 公開日 2015-09-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Discovery of gamma-Mangostin as an Amyloidogenesis Inhibitor Sci Rep, 5, 2015
4Y9G	Crystal structure of V30M mutated transthyretin in complex with 3-isomangostin 分子名称: 5,9-dihydroxy-8-methoxy-2,2-dimethyl-7-(3-methylbut-2-en-1-yl)-3,4-dihydro-2H,6H-pyrano[3,2-b]xanthen-6-one, Transthyretin 著者 Yokoyama, T, Mizuguchi, M. 登録日 2015-02-17 公開日 2015-09-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Discovery of gamma-Mangostin as an Amyloidogenesis Inhibitor Sci Rep, 5, 2015
5TG3	Crystal Structure of Dioclea reflexa seed lectin (DrfL) in complex with X-Man 分子名称: 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, Dioclea reflexa lectin, ... 著者 Santiago, M.Q, Correia, J.L.A, Pinto-Junior, V.R, Osterne, V.J.S, Pereira, R.I, Silva-Filho, J.C, Lossio, C.F, Rocha, B.A.M, Delatorre, P, Neco, A.H.B, Araripe, D.A, Nascimento, K.S, Cavada, B.S. 登録日 2016-09-27 公開日 2017-02-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.765 Å) 主引用文献 Structural studies of a vasorelaxant lectin from Dioclea reflexa Hook seeds: Crystal structure, molecular docking and dynamics. Int. J. Biol. Macromol., 98, 2017
3PB2	Characterisation of the first monomeric dihydrodipicolinate synthase variant reveals evolutionary insights 分子名称: Dihydrodipicolinate synthase, GLYCEROL 著者 Pearce, F.G, Dobson, R.C.J, Jameson, G.B. 登録日 2010-10-20 公開日 2011-11-23 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Characterization of monomeric dihydrodipicolinate synthase variant reveals the importance of substrate binding in optimizing oligomerization. Biochim.Biophys.Acta, 1814, 2011
8DUJ	Global map in C1 of RyR1 particles in complex with ImperaCalcin 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ... 著者 Haji-Ghassemi, O, Van Petegm, F. 登録日 2022-07-27 公開日 2023-05-31 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation. Sci Adv, 9, 2023
5K1J	Human TTR altered by a rhenium tris-carbonyl Pyta-C8 derivative 分子名称: 1,2-ETHANEDIOL, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Stura, E.A, Ciccone, L, Shepard, W. 登録日 2016-05-18 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Human TTR conformation altered by rhenium tris-carbonyl derivatives. J.Struct.Biol., 195, 2016
2VGU	Crystal structure of E53QbsSHMT with L-serine 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Rajaram, V, Bhavani, B.S, Kaul, P, Prakash, V, Appaji Rao, N, Savithri, H.S, Murthy, M.R.N. 登録日 2007-11-15 公開日 2007-12-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure Determination and Biochemical Studies on Bacillus Stearothermophilus E53Q Serine Hydroxymethyltransferase and its Complexes Provide Insights on Function and Enzyme Memory FEBS J., 274, 2007
8DVE	RyR1 in presence of IpCa-T26E phosphomimetic and activating ligands 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ... 著者 Haji-Ghassemi, O, Van Petegm, F. 登録日 2022-07-28 公開日 2023-05-31 最終更新日 2023-07-05 実験手法 ELECTRON MICROSCOPY (3.84 Å) 主引用文献 Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation. Sci Adv, 9, 2023

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