PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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3BZF	The human non-classical major histocompatibility complex molecule HLA-E 分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, alpha chain E, ... 著者 Hoare, H.L, Sullivan, L.C, Ely, L.K, Beddoe, T, Henderson, K.N, Lin, J, Clements, C.S, Reid, H.H, Brooks, A.G, Rossjohn, J. 登録日 2008-01-17 公開日 2008-04-29 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Subtle changes in peptide conformation profoundly affect recognition of the non-classical MHC class I molecule HLA-E by the CD94-NKG2 natural killer cell receptors J.Mol.Biol., 377, 2008
8WH9	Structure of DDM1-nucleosome complex in ADP-BeFx state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.31 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
1N80	Bacteriophage T4 baseplate structural protein gp8 分子名称: CHLORIDE ION, baseplate structural protein gp8 著者 Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G. 登録日 2002-11-18 公開日 2003-06-10 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structure and location of gene product 8 in the bacteriophage T4 baseplate J.Mol.Biol., 328, 2003
5FGH	Yeast 20S proteasome beta5-K33A mutant (propeptide expressed in trans) in complex with MG132 分子名称: CHLORIDE ION, MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide, ... 著者 Huber, E.M, Groll, M. 登録日 2015-12-20 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
7LYE	Myotoxin I from Bothrops moojeni co-crystallized with synthetic inhibitor Varespladib (LY315920) 分子名称: ({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Basic phospholipase A2 homolog BomoTx 著者 Salvador, G.H.M, Borges, R.J, Fontes, M.R.M. 登録日 2021-03-06 公開日 2021-05-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.758 Å) 主引用文献 The synthetic varespladib molecule is a multi-functional inhibitor for PLA 2 and PLA 2 -like ophidic toxins. Biochim Biophys Acta Gen Subj, 1865, 2021
3C77	1.08 A crystal structure of nitrophorin 4 from Rhodnius prolixus containing FE(III) deuteroporphyrin ix complexed with ammonia at ph 7.5 分子名称: AMMONIA, FE(III) DEUTEROPORPHYRIN IX, Nitrophorin-4 著者 Amoia, A.M, Montfort, W.R. 登録日 2008-02-06 公開日 2008-03-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Heme Distortion in Nitrophorin 4: High Resolution Structures of Mutated Positions L123V and L133V and Heme Altered Proteins To be Published
2V0U	n- and c-terminal helices of oat lov2 (404-546) are involved in light-induced signal transduction (cryo dark structure of lov2 (404-546)) 分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, NPH1-1 著者 Halavaty, A.S, Moffat, K. 登録日 2007-05-18 公開日 2007-12-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 N- and C-Terminal Flanking Regions Modulate Light-Induced Signal Transduction in the Lov2 Domain of the Blue Light Sensor Phototropin 1 from Avena Sativa. Biochemistry, 46, 2007
3CCQ	Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U 分子名称: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ... 著者 Blaha, G, Gurel, G. 登録日 2008-02-26 公開日 2008-05-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol., 379, 2008
3BX2	Puf4 RNA binding domain bound to HO endonuclease RNA 3' UTR recognition sequence 分子名称: HO endonuclease 3' UTR binding sequence, Protein PUF4, SODIUM ION, ... 著者 Miller, M.T, Higgin, J.J, Hall, T.M.T. 登録日 2008-01-11 公開日 2008-03-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p Nat.Struct.Mol.Biol., 15, 2008
2V1A	N- and C-terminal helices of oat LOV2 (404-546) are involved in light-induced signal transduction (room temperature (293K) dark structure of LOV2 (404-546)) 分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, NPH1-1 著者 Halavaty, A.S, Moffat, K. 登録日 2007-05-22 公開日 2007-12-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 N- and C-Terminal Flanking Regions Modulate Light-Induced Signal Transduction in the Lov2 Domain of the Blue Light Sensor Phototropin 1 from Avena Sativa. Biochemistry, 46, 2007
2V4E	A non-cytotoxic DsRed variant for whole-cell labeling 分子名称: RED FLUORESCENT PROTEIN DRFP583 著者 Strack, R.L, Strongin, D.E, Bhattacharyya, D, Tao, W, Berman, A, Broxmeyer, H.E, Keenan, R.J, Glick, B.S. 登録日 2008-09-20 公開日 2008-11-04 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A Noncytotoxic Dsred Variant for Whole-Cell Labeling. Nat.Methods, 5, 2008
5EJ4	EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 15 min 分子名称: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, FORMIC ACID, ... 著者 Song, H.G, Dong, C, Chen, Y.Z, Sun, Y.R, Guo, Z.H. 登録日 2015-11-01 公開日 2016-06-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.773 Å) 主引用文献 A Thiamine-Dependent Enzyme Utilizes an Active Tetrahedral Intermediate in Vitamin K Biosynthesis J.Am.Chem.Soc., 138, 2016
3G93	Single ligand occupancy crystal structure of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole 分子名称: 1-(biphenyl-4-ylmethyl)-1H-imidazole, Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE 著者 Gay, S.C, Sun, L, Maekawa, K, Halpert, J.R, Stout, C.D. 登録日 2009-02-12 公開日 2009-05-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structures of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole: ligand-induced structural response through alpha-helical repositioning. Biochemistry, 48, 2009
1OK8	Crystal structure of the dengue 2 virus envelope glycoprotein in the postfusion conformation 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, MAJOR ENVELOPE PROTEIN E 著者 Modis, Y, Harrison, S.C. 登録日 2003-07-19 公開日 2004-01-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the Dengue Virus Envelope Protein After Membrane Fusion Nature, 427, 2004
4N64	Crystal structure of hemagglutinin from an H7N9 influenza virus in complex with a biantennary glycan receptor 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ... 著者 Xu, R, Wilson, I.A. 登録日 2013-10-11 公開日 2013-12-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.7014 Å) 主引用文献 Preferential recognition of avian-like receptors in human influenza A H7N9 viruses. Science, 342, 2013
5EPU	X-ray structure uridine phosphorylase from Vibrio cholerae in complex with cytosine at 1.06A. 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-AMINOPYRIMIDIN-2(1H)-ONE, ... 著者 Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M. 登録日 2015-11-12 公開日 2016-11-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.06 Å) 主引用文献 X-ray structure uridine phosphorylase from Vibrio cholerae in complex with cytosine at 1.06A. To Be Published
1ONY	Oxalyl-Aryl-Amino Benzoic Acid inhibitors of PTP1B, compound 17 分子名称: 2-{[2-(2-CARBAMOYL-VINYL)-4-(2-METHANESULFONYLAMINO-2-PENTYLCARBAMOYL-ETHYL)-PHENYL]-OXALYL-AMINO}-BENZOIC ACID, Protein-tyrosine phosphatase, non-receptor type 1 著者 Liu, G, Szczepankiewicz, B.G, Pei, Z, Janowich, D.A, Xin, Z, Hadjuk, P.J, Abad-Zapatero, C, Liang, H, Hutchins, C.W, Fesik, S.W, Ballaron, S.J, Stashko, M.A, Lubben, T, Mika, A.K, Zinker, B.A, Trevillyan, J.M, Jirousek, M.R. 登録日 2003-03-02 公開日 2003-05-20 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Discovery and Structure-Activity Relationship of Oxalylarylaminobenzoic Acids as Inhibitors of Protein Tyrosine Phosphatase 1B J.Med.Chem., 46, 2003
3BX3	Puf4 T650C/C724R Mutant bound to Cox17 RNA 3' UTR recognition sequence 分子名称: COX17 RNA target sequence, Protein PUF4, SULFATE ION 著者 Miller, M.T, Higgin, J.J, Hall, T.M.T. 登録日 2008-01-11 公開日 2008-03-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p Nat.Struct.Mol.Biol., 15, 2008
2X3T	Glutaraldehyde-crosslinked wheat germ agglutinin isolectin 1 crystal soaked with a synthetic glycopeptide 分子名称: 2-acetamido-1-O-carbamoyl-2-deoxy-alpha-D-glucopyranose, AGGLUTININ ISOLECTIN 1, D-ALPHA-AMINOBUTYRIC ACID, ... 著者 Schwefel, D, Maierhofer, C, Wittmann, V, Diederichs, K, Welte, W. 登録日 2010-01-26 公開日 2010-06-30 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.749 Å) 主引用文献 Structural Basis of Multivalent Binding to Wheat Germ Agglutinin. J.Am.Chem.Soc., 132, 2010
7K14	Ternary soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN and methanesulfonate 分子名称: Alkanesulfonate monooxygenase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ... 著者 Liew, J.J.M, Dowling, D.P, El Saudi, I.M. 登録日 2020-09-07 公開日 2021-05-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
7JYB	Binary soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN 分子名称: Alkanesulfonate monooxygenase, FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, ... 著者 Liew, J.J.M, Dowling, D.P, El Saudi, I.M. 登録日 2020-08-30 公開日 2021-05-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
5GJE	Three-dimensional reconstruction of human LRP6 ectodomain complexed with Dkk1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Matoba, K, Mihara, E, Tamura-Kawakami, K, Hirai, H, Thompson, S, Iwasaki, K, Takagi, J. 登録日 2016-06-29 公開日 2017-01-18 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (21 Å) 主引用文献 Conformational Freedom of the LRP6 Ectodomain Is Regulated by N-glycosylation and the Binding of the Wnt Antagonist Dkk1 Cell Rep, 18, 2017
5GKY	Structure of RyR1 in a closed state (C1 conformer) 分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION 著者 Bai, X.C, Yan, Z, Wu, J.P, Yan, N. 登録日 2016-07-07 公開日 2016-08-24 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening Cell Res., 26, 2016
7JW9	Ternary cocrystal structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens 分子名称: Alkanesulfonate monooxygenase, FLAVIN MONONUCLEOTIDE, SODIUM ION, ... 著者 Liew, J.J.M, Dowling, D.P. 登録日 2020-08-25 公開日 2021-05-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021
7JV3	Crystal structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens 分子名称: Alkanesulfonate monooxygenase 著者 Liew, J.J.M, Dowling, D.P. 登録日 2020-08-20 公開日 2021-05-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structures of the alkanesulfonate monooxygenase MsuD provide insight into C-S bond cleavage, substrate scope, and an unexpected role for the tetramer. J.Biol.Chem., 297, 2021

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