Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1W1I
DownloadVisualize
BU of 1w1i by Molmil
Crystal structure of dipeptidyl peptidase IV (DPPIV or CD26) in complex with adenosine deaminase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Weihofen, W.A, Liu, J, Reutter, W, Saenger, W, Fan, H.
登録日2004-06-22
公開日2004-09-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Crystal structure of CD26/dipeptidyl-peptidase IV in complex with adenosine deaminase reveals a highly amphiphilic interface.
J. Biol. Chem., 279, 2004
7ZZ5
DownloadVisualize
BU of 7zz5 by Molmil
Cryo-EM structure of "BC open" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: ACETYL COENZYME *A, BICARBONATE ION, Pyruvate carboxylase
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-10-12
最終更新日2022-10-26
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
7ZYZ
DownloadVisualize
BU of 7zyz by Molmil
Cryo-EM structure of "CT oxa" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: MANGANESE (II) ION, OXALOACETATE ION, Pyruvate carboxylase
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-10-12
最終更新日2022-11-02
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
4PEZ
DownloadVisualize
BU of 4pez by Molmil
Structure of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminaritetraose
分子名称: 1,2-ETHANEDIOL, Putative secreted protein, beta-D-glucopyranose, ...
著者Bianchetti, C.M, Takasuka, T.E, Yik, E.J, Bergeman, L.F, Fox, B.G.
登録日2014-04-25
公開日2015-03-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Active site and laminarin binding in glycoside hydrolase family 55.
J.Biol.Chem., 290, 2015
7ZZ1
DownloadVisualize
BU of 7zz1 by Molmil
Cryo-EM structure of "CT react" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: BIOTIN, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-10-12
最終更新日2022-11-02
実験手法ELECTRON MICROSCOPY (2.27 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
7ZZ2
DownloadVisualize
BU of 7zz2 by Molmil
Cryo-EM structure of "CT pyr" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: MAGNESIUM ION, MANGANESE (II) ION, PYRUVIC ACID, ...
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-10-12
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
7ZZ0
DownloadVisualize
BU of 7zz0 by Molmil
Cryo-EM structure of "CT empty" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: MAGNESIUM ION, MANGANESE (II) ION, Pyruvate carboxylase
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-10-12
最終更新日2022-11-02
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
1LUL
DownloadVisualize
BU of 1lul by Molmil
DB58, A LEGUME LECTIN FROM DOLICHOS BIFLORUS
分子名称: CALCIUM ION, LECTIN DB58, MANGANESE (II) ION
著者Hamelryck, T.W, Bouckaert, J, Dao-Thi, M.H, Wyns, L, Etzler, M, Loris, R.
登録日1998-06-30
公開日1998-12-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus.
J.Mol.Biol., 286, 1999
7ZZ4
DownloadVisualize
BU of 7zz4 by Molmil
Cryo-EM structure of "BC closed" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: ACETYL COENZYME *A, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-10-12
最終更新日2022-11-02
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
4UP1
DownloadVisualize
BU of 4up1 by Molmil
Crystal structure of native human Thymidylate synthase in active form
分子名称: SULFATE ION, THYMIDYLATE SYNTHASE
著者Deschamps, P, Rety, S, Leulliot, N.
登録日2014-06-11
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.991 Å)
主引用文献Crystal structure of the active form of native human thymidylate synthase in the absence of bound substrates.
Acta Crystallogr F Struct Biol Commun, 73, 2017
8PT4
DownloadVisualize
BU of 8pt4 by Molmil
beta-Ureidopropionase tetramer
分子名称: Beta-ureidopropionase
著者Cederfelt, D, Dobritzsch, D.
登録日2023-07-13
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献The Allosteric Regulation of Beta-Ureidopropionase Depends on Fine-Tuned Stability of Active-Site Loops and Subunit Interfaces.
Biomolecules, 13, 2023
5XSJ
DownloadVisualize
BU of 5xsj by Molmil
XylFII-LytSN complex
分子名称: Periplasmic binding protein/LacI transcriptional regulator, Signal transduction histidine kinase, LytS, ...
著者Li, J.X, Wang, C.Y, Zhang, P.
登録日2017-06-14
公開日2017-08-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Molecular mechanism of environmental d-xylose perception by a XylFII-LytS complex in bacteria
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7ZZ6
DownloadVisualize
BU of 7zz6 by Molmil
Cryo-EM structure of "CT-CT dimer" of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: MAGNESIUM ION, MANGANESE (II) ION, PYRUVIC ACID, ...
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-12-28
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.15 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
2VGS
DownloadVisualize
BU of 2vgs by Molmil
Crystal structure of E53QbsSHMT internal aldimine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PYRIDOXAL-5'-PHOSPHATE, SERINE HYDROXYMETHYLTRANSFERASE
著者Rajaram, V, Bhavani, B.S, Kaul, P, Prakash, V, Appaji Rao, N, Savithri, H.S, Murthy, M.R.N.
登録日2007-11-15
公開日2007-12-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure Determination and Biochemical Studies on Bacillus Stearothermophilus E53Q Serine Hydroxymethyltransferase and its Complexes Provide Insights on Function and Enzyme Memory
FEBS J., 274, 2007
4P3G
DownloadVisualize
BU of 4p3g by Molmil
Structure of the SRP68-RBD from Chaetomium thermophilum
分子名称: PHOSPHATE ION, Signal recognition particle subunit SRP68
著者Grotwinkel, J.T, Wild, K, Sinning, I.
登録日2014-03-07
公開日2014-04-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献SRP RNA remodeling by SRP68 explains its role in protein translocation.
Science, 344, 2014
7KC2
DownloadVisualize
BU of 7kc2 by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 -Closed Form with NADH
分子名称: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-04
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
4P6Z
DownloadVisualize
BU of 4p6z by Molmil
Crystal structure of the human BST2 cytoplasmic domain and the HIV-1 Vpu cytoplasmic domain bound to the clathrin adaptor protein complex 1 (AP1) core
分子名称: AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, AP-1 complex subunit mu-1, ...
著者Jia, X, Xiong, Y.
登録日2014-03-25
公開日2014-05-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of HIV-1 Vpu-mediated BST2 antagonism via hijacking of the clathrin adaptor protein complex 1.
Elife, 3, 2014
1MW5
DownloadVisualize
BU of 1mw5 by Molmil
Structure of HI1480 from Haemophilus influenzae
分子名称: HYPOTHETICAL PROTEIN HI1480
著者Lim, K, Sarikaya, E, Howard, A, Galkin, A, Herzberg, O, Structure 2 Function Project (S2F)
登録日2002-09-27
公開日2003-11-18
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Novel structure and nucleotide binding properties of HI1480 from Haemophilus influenzae: a protein with no known sequence homologues
PROTEINS: STRUCT.,FUNCT.,GENET., 56, 2004
6UOH
DownloadVisualize
BU of 6uoh by Molmil
Asparaginase II from Escherichia coli
分子名称: ASPARTIC ACID, L-asparaginase 2
著者Araujo, T.S, Almeida, M.S, Lima, L.M.T.R.
登録日2019-10-14
公開日2020-10-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2.
Biophys.Chem., 271, 2021
4I08
DownloadVisualize
BU of 4i08 by Molmil
Crystal structure of beta-ketoacyl-acyl carrier protein reductase (FabG) from Vibrio cholerae in complex with NADPH
分子名称: 1,2-ETHANEDIOL, 3-oxoacyl-[acyl-carrier-protein] reductase FabG, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Hou, J, Chruszcz, M, Zheng, H, Osinski, T, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-11-16
公開日2012-12-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.063 Å)
主引用文献Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae.
J.Bacteriol., 198, 2015
4PDJ
DownloadVisualize
BU of 4pdj by Molmil
Neutron crystal Structure of E.coli Dihydrofolate Reductase complexed with folate and NADP+
分子名称: DIHYDROFOLIC ACID, Dihydrofolate reductase, MANGANESE (II) ION, ...
著者Wan, Q, Kovalevsky, A.Y, Wilson, M, Langan, P, Dealwis, C, Bennett, B.
登録日2014-04-18
公開日2015-04-15
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.599 Å), X-RAY DIFFRACTION
主引用文献Toward resolving the catalytic mechanism of dihydrofolate reductase using neutron and ultrahigh-resolution X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 111, 2014
4L5I
DownloadVisualize
BU of 4l5i by Molmil
Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition
分子名称: Transcriptional regulator LsrR
著者Ryu, K.S, Ha, J.H, Eo, Y.
登録日2013-06-11
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Crystal Structures of the LsrR Proteins Complexed with Phospho-AI-2 and Two Signal-Interrupting Analogues Reveal Distinct Mechanisms for Ligand Recognition.
J.Am.Chem.Soc., 135, 2013
3O4X
DownloadVisualize
BU of 3o4x by Molmil
Crystal structure of complex between amino and carboxy terminal fragments of mDia1
分子名称: Protein diaphanous homolog 1
著者Eck, M.J, Nezami, A, Toms, A.V.
登録日2010-07-27
公開日2010-10-13
最終更新日2012-04-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of a complex between amino and carboxy terminal fragments of mDia1: insights into autoinhibition of diaphanous-related formins.
Plos One, 5, 2010
4PSM
DownloadVisualize
BU of 4psm by Molmil
Crystal structure of pfuThermo-DBP-RP1 (crystal form II)
分子名称: SULFATE ION, ssDNA binding protein
著者Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C.
登録日2014-03-07
公開日2014-04-30
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
8J5Z
DownloadVisualize
BU of 8j5z by Molmil
The cryo-EM structure of the TwOSC1 tetramer
分子名称: Terpene cyclase/mutase family member, octyl beta-D-glucopyranoside
著者Ma, X, Yuru, T, Yunfeng, L, Jiang, T.
登録日2023-04-24
公開日2023-11-01
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (4.75 Å)
主引用文献Structural and Catalytic Insight into the Unique Pentacyclic Triterpene Synthase TwOSC.
Angew.Chem.Int.Ed.Engl., 62, 2023

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon