PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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463D	CALCIUM FORM OF D(CGCGAATTCGCG)2 分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') 著者 Liu, J, Subirana, J.A. 登録日 1999-03-29 公開日 1999-10-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structure of d(CGCGAATTCGCG) in the presence of Ca(2+) ions. J.Biol.Chem., 274, 1999
4III	Lambda-[Ru(TAP)2(11-Cl-dppz)] with a DNA decamer at atomic resolution 分子名称: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', BARIUM ION, Ru(TAP)2(Cl-dppz) complex 著者 Hall, J.P, Cardin, C.J. 登録日 2012-12-20 公開日 2013-07-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.02 Å) 主引用文献 Preferred orientation in an angled intercalation site of a chloro-substituted Lambda-[Ru(TAP)2(dppz)]2+ complex bound to d(TCGGCGCCGA)2. Philos Trans A Math Phys Eng Sci, 371, 2013
8CE0	N-terminal domain of human apolipoprotein E 分子名称: GLYCEROL, Maltodextrin-binding protein,Apolipoprotein E 著者 Marek, M, Nemergut, M. 登録日 2023-02-01 公開日 2023-07-19 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Domino-like effect of C112R mutation on ApoE4 aggregation and its reduction by Alzheimer's Disease drug candidate. Mol Neurodegener, 18, 2023
1NZD	T4 phage BGT-D100A mutant in complex with UDP-glucose: Form I 分子名称: CHLORIDE ION, DNA beta-glycosyltransferase, GLYCEROL, ... 著者 Lariviere, L, Morera, S. 登録日 2003-02-17 公開日 2003-09-09 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of the T4 phage beta-glucosyltransferase and the D100A mutant in complex with UDP-glucose: glucose binding and identification of the catalytic base for a direct displacement mechanism J.Mol.Biol., 330, 2003
2JPN	Solution Structure of T4 Bacteriophage Helicase Uvsw.1 分子名称: ATP-dependent DNA helicase uvsW 著者 Sivakolundu, S.G, Lee, T, White, S.W, Kriwacki, R.W. 登録日 2007-05-17 公開日 2007-07-10 最終更新日 2023-12-20 実験手法 SOLUTION NMR 主引用文献 Crystallographic and NMR Analyses of UvsW and UvsW.1 from Bacteriophage T4 J.Biol.Chem., 282, 2007
1NZF	T4 phage BGT-D100A mutant in complex with UDP-glucose: Form II 分子名称: CHLORIDE ION, DNA beta-glycosyltransferase, GLYCEROL, ... 著者 Lariviere, L, Morera, S. 登録日 2003-02-17 公開日 2003-09-09 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of the T4 phage beta-glucosyltransferase and the D100A mutant in complex with UDP-glucose: glucose binding and identification of the catalytic base for a direct displacement mechanism. J.Mol.Biol., 330, 2003
5DMA	Crystal structure of C-terminal tudor domain in PcrA/UvrD helicase 分子名称: ATP-dependent DNA helicase PcrA 著者 Lin, C.L, Dillingham, M, Wigley, D. 登録日 2015-09-08 公開日 2016-09-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 The structure and function of an RNA polymerase interaction domain in the PcrA/UvrD helicase. Nucleic Acids Res., 45, 2017
8COM	Structure of the Nucleosome Core Particle from Trypanosoma brucei 分子名称: Histone H2A, Histone H2B, Histone H3, ... 著者 Burdett, H, Deak, G, Wilson, M.D. 登録日 2023-02-28 公開日 2023-07-12 最終更新日 2023-09-06 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Histone divergence in trypanosomes results in unique alterations to nucleosome structure. Nucleic Acids Res., 51, 2023
8DES	Gokushovirus EC6098 分子名称: Major capsid protein, Putative DNA binding protein 著者 Lee, H, Fane, B.A, Hafenstein, S.L. 登録日 2022-06-21 公開日 2022-10-12 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Cryo-EM Structure of Gokushovirus Phi EC6098 Reveals a Novel Capsid Architecture for a Single-Scaffolding Protein, Microvirus Assembly System. J.Virol., 96, 2022
7SHL	Structure of Xenopus laevis CRL2Lrr1 (State 2) 分子名称: CULLIN_2 domain-containing protein, Elongin-C, Lrr1, ... 著者 Zhou, H, Brown, A. 登録日 2021-10-09 公開日 2021-12-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of CRL2Lrr1, the E3 ubiquitin ligase that promotes DNA replication termination in vertebrates. Nucleic Acids Res., 49, 2021
7SHK	Structure of Xenopus laevis CRL2Lrr1 (State 1) 分子名称: CULLIN_2 domain-containing protein, Elongin-C, Lrr1, ... 著者 Zhou, H, Brown, A. 登録日 2021-10-09 公開日 2021-12-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of CRL2Lrr1, the E3 ubiquitin ligase that promotes DNA replication termination in vertebrates. Nucleic Acids Res., 49, 2021
7LIV	Structure of human transfer RNA visualized in the cytomegalovirus, a DNA virus 分子名称: Major capsid protein, Small capsomere-interacting protein, Tegument protein pp150, ... 著者 Liu, Y.T, Strugatsky, D, Liu, W, Zhou, Z.H. 登録日 2021-01-28 公開日 2021-09-15 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of human cytomegalovirus virion reveals host tRNA binding to capsid-associated tegument protein pp150. Nat Commun, 12, 2021
2KKA	Human telomere DNA two-tetrad quadruplex structure in K+ solution 分子名称: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3' 著者 Zhang, Z, Dai, J, Yang, D. 登録日 2009-06-16 公開日 2009-12-15 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures. Nucleic Acids Res., 38, 2010
7LJ3	Structure of human transfer RNA visualized in the cytomegalovirus, a DNA virus 分子名称: RNA (75-MER), Tegument protein pp150 著者 Liu, Y.T, Strugatsky, D, Liu, W, Zhou, Z.H. 登録日 2021-01-28 公開日 2021-11-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structure of human cytomegalovirus virion reveals host tRNA binding to capsid-associated tegument protein pp150. Nat Commun, 12, 2021
3G75	Crystal structure of Staphylococcus aureus Gyrase B co-complexed with 4-METHYL-5-[3-(METHYLSULFANYL)-1H-PYRAZOL-5-YL]-2-THIOPHEN-2-YL-1,3-THIAZOLE inhibitor 分子名称: 4-methyl-5-[3-(methylsulfanyl)-1H-pyrazol-5-yl]-2-thiophen-2-yl-1,3-thiazole, DNA gyrase subunit B 著者 Wei, Y, Charifson, P. 登録日 2009-02-09 公開日 2010-02-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Discovery of pyrazolthiazoles as novel and potent inhibitors of bacterial gyrase. Bioorg.Med.Chem.Lett., 20, 2010
2KAR	HNE-dG adduct mismatched with dA in acidic solution 分子名称: (4S)-nonane-1,4-diol, 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DAP*DGP*DCP*DTP*DAP*DGP*DC)-3' 著者 Huang, H, Wang, H, Lloyd, R.S, Rizzo, C.J, Stone, M.P. 登録日 2008-11-13 公開日 2009-05-26 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Conformational interconversion of the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N(2)-deoxyguanosine adduct when mismatched with deoxyadenosine in DNA Chem.Res.Toxicol., 22, 2009
2KPR	Monomeric intronic human chl1 gene quadruplex DNA NMR, 17 structures 分子名称: 5'-D(*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*GP*GP*GP*TP*GP*GP*GP*T)-3' 著者 Kuryavyi, V, Patel, D.J. 登録日 2009-10-19 公開日 2010-03-02 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of a Unique G-Quadruplex Scaffold Adopted by a Guanosine-Rich Human Intronic Sequence. Structure, 18, 2010
2MHC	NMR structure of the catalytic domain of the large serine resolvase TnpX 分子名称: TnpX 著者 Headey, S.J, Sivakumaran, A, Adams, V, Rodgers, A.J.W, Rood, J.I, Scanlon, M.J, Wilce, M.C.J. 登録日 2013-11-20 公開日 2014-11-26 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution Structure and DNA Binding of the Catalytic of the Large Serine Resolvase Tnpx To be Published
8CBQ	structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Novacek, J, Veverka, V. 登録日 2023-01-25 公開日 2023-09-06 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
5A3D	Structural insights into the recognition of cisplatin and AAF-dG lesions by Rad14 (XPA) 分子名称: 5'-D(*DG 5IUP*GP*A 5IUP*GP*AP*CP*G 5IUP*AP*GP*AP*DGP*AP)-3', 5'-D(*DTP*CP*TP*CP*TP*AP*C 8FGP*TP*CP*AP*TP*CP*DAP*CP)-3', DNA REPAIR PROTEIN RAD14, ... 著者 Kuper, J, Koch, S.C, Gasteiger, K.L, Wichlein, N, Schneider, S, Kisker, C, Carell, T. 登録日 2015-05-28 公開日 2015-07-01 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Insights Into the Recognition of Cisplatin and Aaf-Dg Lesion by Rad14 (Xpa). Proc.Natl.Acad.Sci.USA, 112, 2015
1SMN	IDENTIFICATION OF THE SERRATIA ENDONUCLEASE DIMER: STRUCTURAL BASIS AND IMPLICATIONS FOR CATALYSIS 分子名称: EXTRACELLULAR ENDONUCLEASE 著者 Miller, M.D, Krause, K.L. 登録日 1995-01-25 公開日 1996-01-29 最終更新日 2018-04-18 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Identification of the Serratia endonuclease dimer: structural basis and implications for catalysis. Protein Sci., 5, 1996
1N7U	THE RECEPTOR-BINDING PROTEIN P2 OF BACTERIOPHAGE PRD1: CRYSTAL FORM I 分子名称: ACETATE ION, Adsorption protein P2, CALCIUM ION 著者 Xu, L, Benson, S.D, Butcher, S.J, Bamford, D.H, Burnett, R.M. 登録日 2002-11-18 公開日 2003-04-08 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The Receptor Binding Protein P2 of PRD1, a Virus Targeting Antibiotic-Resistant Bacteria, Has a Novel Fold Suggesting Multiple Functions. Structure, 11, 2003
1N7V	THE RECEPTOR-BINDING PROTEIN P2 OF BACTERIOPHAGE PRD1: CRYSTAL FORM III 分子名称: ACETATE ION, Adsorption protein P2, CALCIUM ION 著者 Xu, L, Benson, S.D, Butcher, S.J, Bamford, D.H, Burnett, R.M. 登録日 2002-11-18 公開日 2003-04-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The Receptor Binding Protein P2 of PRD1, a Virus Targeting Antibiotic-Resistant Bacteria, Has a Novel Fold Suggesting Multiple Functions. Structure, 11, 2003
8CBN	structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Novacek, J, Veverka, V. 登録日 2023-01-25 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.34 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
8QR1	Cryo-EM structure of the human Tip60 complex 分子名称: Actin, cytoplasmic 1, N-terminally processed, ... 著者 Li, C, Smirnova, E, Schnitzler, C, Crucifix, C, Concordet, J.P, Brion, A, Poterszman, A, Schultz, P, Papai, G, Ben-Shem, A. 登録日 2023-10-06 公開日 2024-08-07 最終更新日 2024-10-02 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Structure of human TIP60-C histone exchange and acetyltransferase complex. Nature, 2024

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