PDB: 217686 件ウェブページステータス検索Chemie searchBIRD

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7KCI	DETERMINANTS OF REPRESSOR/OPERATOR RECOGNITION FROM THE STRUCTURE OF THE TRP OPERATOR BINDING SITE 分子名称: Self-complementary deoxyoligonucleotide decamer d(CCACTAGTGG) 著者 Shakked, Z, Guzikevich-Guerstein, G, Frolow, F, Rabinovich, D, Joachimiak, A, Sigler, P.B. 登録日 1994-09-12 公開日 2020-10-14 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Determinants of repressor/operator recognition from the structure of the trp operator binding site. Nature, 368, 1994
6ARE	Aspergillus fumigatus Cytosolic Thiolase in complex with two tetrahedral reaction intermediates and ammonium ions 分子名称: ACETATE ION, ACETYL COENZYME *A, AMMONIUM ION, ... 著者 Marshall, A.C, Bond, C.S, Bruning, J.B. 登録日 2017-08-22 公開日 2018-05-30 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structure of Aspergillus fumigatus Cytosolic Thiolase: Trapped Tetrahedral Reaction Intermediates and Activation by Monovalent Cations Acs Catalysis, 8(3), 2018
3IJE	Crystal structure of the complete integrin alhaVbeta3 ectodomain plus an Alpha/beta transmembrane fragment 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Xiong, J.-P, Mahalingham, B, Rui, X, Hyman, B.T, Goodman, S.L, Arnaout, M.A. 登録日 2009-08-04 公開日 2009-09-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal structure of the complete integrin alphaVbeta3 ectodomain plus an alpha/beta transmembrane fragment. J.Cell Biol., 186, 2009
6MH2	Structure of Herceptin Fab without antigen 分子名称: Herceptin Fab arm heavy chain, Herceptin Fab arm light chain 著者 Luthra, A, Langley, D.B, Christie, M, Christ, D. 登録日 2018-09-17 公開日 2019-05-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Human Antibody Bispecifics through Phage Display Selection. Biochemistry, 58, 2019
5IQQ	Crystal structure of the human RBM7 RRM domain 分子名称: RNA-binding protein 7 著者 Sofos, N, Winkler, M.B.L, Brodersen, D.E. 登録日 2016-03-11 公開日 2016-05-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 RRM domain of human RBM7: purification, crystallization and structure determination. Acta Crystallogr.,Sect.F, 72, 2016
6F6T	Phenylalanine ammonia-lyase (PAL) from Petroselinum crispum complexed with S-APPA 分子名称: (S)-(1-amino-2phenylallyl)phosphonic acid, Phenylalanine ammonia-lyase 1 著者 Bata, Z, Leveles, I, Vertessy, G.B, Poppe, L. 登録日 2017-12-06 公開日 2019-06-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.89995968 Å) 主引用文献 Substrate Tunnel Engineering Aided by X-ray Crystallography and Functional Dynamics Swaps the Function of MIO-Enzymes Acs Catalysis, 2021
8DGS	Cryo-EM structure of a RAS/RAF complex (state 1) 分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, ... 著者 Eck, M.J, Jeon, H, Park, E, Rawson, S. 登録日 2022-06-24 公開日 2023-07-05 最終更新日 2023-08-09 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cryo-EM structure of a RAS/RAF recruitment complex. Nat Commun, 14, 2023
8DGT	Cryo-EM structure of a RAS/RAF complex (state 2) 分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, ... 著者 Eck, M.J, Jeon, H, Park, E, Rawson, S. 登録日 2022-06-24 公開日 2023-07-05 最終更新日 2023-08-09 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Cryo-EM structure of a RAS/RAF recruitment complex. Nat Commun, 14, 2023
5VN1	horse liver alcohol dehydrogenae complexed with NADH (R,S)-N-1-methylhexylformamide 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (R)-N-(1-METHYL-HEXYL)-FORMAMIDE, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ... 著者 Plapp, B.V, Ramaswamy, S, Ferraro, D.J, Baskar Raj, S. 登録日 2017-04-28 公開日 2017-05-10 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis. Biochemistry, 56, 2017
6MOA	C-terminal bromodomain of human BRD2 in complex with 4-(2-cyclopropyl-7-(6-methylquinolin-5-yl)-1H-benzo[d]imidazol-5-yl)-3,5-dimethylisoxazole inhibitor 分子名称: 4-(2-cyclopropyl-7-(6-methylquinolin-5-yl)-1H-benzo[d]imidazol-5-yl)-3,5-dimethylisoxazole, Bromodomain-containing protein 2, GLYCEROL 著者 Lansdon, E.B, Newby, Z.E.R. 登録日 2018-10-04 公開日 2019-01-23 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.271 Å) 主引用文献 Structure-guided discovery of a novel, potent, and orally bioavailable 3,5-dimethylisoxazole aryl-benzimidazole BET bromodomain inhibitor. Bioorg. Med. Chem., 27, 2019
8CU1	Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 500ns, with eightfold extrapolation of structure factor differences 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ... 著者 Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D. 登録日 2022-05-16 公開日 2023-07-26 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Direct visualization of electric field-stimulated ion conduction in a potassium channel To Be Published
8CU3	Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 200ns, with eightfold extrapolation of structure factor differences 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ... 著者 Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D. 登録日 2022-05-16 公開日 2023-07-26 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Direct visualization of electric field-stimulated ion conduction in a potassium channel To Be Published
7P36	X-ray structure of Lactobacillus kefir alcohol dehydrogenase (wild type) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... 著者 Bischoff, D, Walla, B, Janowski, R, Niessing, D, Weuster-Botz, D. 登録日 2021-07-07 公開日 2021-07-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Transfer of a Rational Crystal Contact Engineering Strategy between Diverse Alcohol Dehydrogenases Crystals, 11, 2021
6PB5	The E. coli class-II CAP-dependent transcription activation complex at the state 1 architecture 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Liu, B, Shi, W. 登録日 2019-06-13 公開日 2020-03-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.52 Å) 主引用文献 Visualization of two architectures in class-II CAP-dependent transcription activation Plos Biol., 18, 2020
8CU4	Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 1us, with eightfold extrapolation of structure factor differences 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ... 著者 Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D. 登録日 2022-05-16 公開日 2023-07-26 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Direct visualization of electric field-stimulated ion conduction in a potassium channel To Be Published
8CU2	Structure of a K+ selective NaK mutant (NaK2K, Laue diffraction) in the presence of an electric field of ~0.8MV/cm along the crystallographic z axis, 100ns, with eightfold extrapolation of structure factor differences 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ... 著者 Lee, B, White, K.I, Socolich, M.A, Klureza, M.A, Henning, R, Srajer, V, Ranganathan, R, Hekstra, D. 登録日 2022-05-16 公開日 2023-07-26 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Direct visualization of electric field-stimulated ion conduction in a potassium channel To Be Published
5LV9	Crystal structure of thermophilic tryptophan halogenase (Th-Hal) enzyme from Streptomycin violaceusniger. 分子名称: thermophilic tryptophan halogenase 著者 Dunstan, M.S, Menon, B. 登録日 2016-09-13 公開日 2016-10-19 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Structure and biocatalytic scope of thermophilic flavin-dependent halogenase and flavin reductase enzymes. Org.Biomol.Chem., 14, 2016
6YHZ	UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain. 分子名称: Transcription-repair-coupling factor 著者 Kawale, A.A, Burmann, B.B. 登録日 2020-03-31 公開日 2020-10-21 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. Commun Biol, 3, 2020
5LW6	Crystal structure of a Se-Met substituted Dictyostelium discoideum ADP-ribose binding macrodomain (residues 342-563) of DDB_G0293866 分子名称: DDB_G0293866 著者 Leys, D, Barkauskaite, E, Pinero, B.B, Ahel, I. 登録日 2016-09-15 公開日 2016-09-28 最終更新日 2016-10-26 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The role of ADP-ribosylation in regulating DNA interstrand crosslink repair. J.Cell.Sci., 129, 2016
7QDF	Hexameric HIV-1 (M-group) CA R120 mutant 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Gag polyprotein, ... 著者 Govasli, M.A.L, Pinotsis, N, McAlpine-Scott, S. 登録日 2021-11-26 公開日 2022-10-19 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.304 Å) 主引用文献 Evasion of cGAS and TRIM5 defines pandemic HIV. Nat Microbiol, 7, 2022
7P7Y	X-ray structure of Lactobacillus kefir alcohol dehydrogenase mutant Q126K 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... 著者 Bischoff, D, Walla, B, Janowski, R, Niessing, D, Weuster-Botz, D. 登録日 2021-07-21 公開日 2021-07-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Transfer of a Rational Crystal Contact Engineering Strategy between Diverse Alcohol Dehydrogenases Crystals, 11, 2021
6YI2	UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain. 分子名称: DNA helicase 著者 Kawale, A.A, Burmann, B.B. 登録日 2020-03-31 公開日 2020-10-21 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. Commun Biol, 3, 2020
6AYO	Crystal structure of Campylobacter jejuni 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with 5'-deoxy-5'-Propyl-DADMe-Immucillin-A 分子名称: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-propylpyrrolidin-3-ol, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ... 著者 Harijan, R.K, Ducati, R.G, Bonanno, J.B, Almo, S.C, Schramm, V.L. 登録日 2017-09-08 公開日 2018-09-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Transition-State Analogues of Campylobacter jejuni 5'-Methylthioadenosine Nucleosidase. ACS Chem. Biol., 13, 2018
7QR3	Chimpanzee CPEB3 HDV-like ribozyme 分子名称: GLYCEROL, POTASSIUM ION, U1 small nuclear ribonucleoprotein A, ... 著者 Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. 登録日 2022-01-10 公開日 2022-10-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
5TPP	Crystal Structure of DH270.5 (unliganded) from the DH270 Broadly Neutralizing N332-glycan Dependent Lineage 分子名称: CITRIC ACID, DH270.5 Fab heavy chain, DH270.5 Fab light chain, ... 著者 Fera, D, Harrison, S.C. 登録日 2016-10-20 公開日 2017-03-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies. Sci Transl Med, 9, 2017

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