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8FTT
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Crystal structure of a glycosylase specific nanobody
分子名称: Anti-NEIL1 Nanobody, SULFATE ION
著者Thompson, M.K, Prakash, A.
登録日2023-01-13
公開日2023-10-11
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Deciphering the orthorhombic crystal structure of a novel NEIL1 nanobody with pseudo-merohedral twinning.
Biorxiv, 2023
7WBK
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Crystal structure of Legionella pneumophila effector protein Lpg0081
分子名称: Lpg0081, SULFATE ION
著者Lee, J, Kim, H, Oh, B.H.
登録日2021-12-16
公開日2022-06-15
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TDD
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BU of 7tdd by Molmil
AtTPC1 D454N-EDTA state II
分子名称: Two pore calcium channel protein 1
著者Dickinson, M.S, Stroud, R.M.
登録日2021-12-30
公開日2022-10-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis of multistep voltage activation in plant two-pore channel 1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7SOT
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LaM domain of human LARP1 in complex with AAAAAA oligonucleotide
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), SULFATE ION
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7TDE
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BU of 7tde by Molmil
AtTPC1 DDE mutant with 1 mM Ca2+
分子名称: Two pore calcium channel protein 1
著者Dickinson, M.S, Stroud, R.M.
登録日2021-12-31
公開日2022-10-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular basis of multistep voltage activation in plant two-pore channel 1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7SXL
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Plasmodium falciparum apicoplast DNA polymerase (exo-minus) without affinity tag
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Nieto, N, Chheda, P, Kerns, R, Nelson, S, Honzatko, R.
登録日2021-11-23
公開日2022-10-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Promising antimalarials targeting apicoplast DNA polymerase from Plasmodium falciparum.
Eur.J.Med.Chem., 243, 2022
7SOV
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LaM domain of human LARP1 in complex with AAAAAAAAAAA RNA polynucleotide
分子名称: GLYCEROL, Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), ...
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOQ
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LaM domain of human LARP1 in complex with AAA RNA
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(*AP*AP*A)-3')
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOO
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LaM domain of human LARP1
分子名称: Isoform 2 of La-related protein 1, SODIUM ION, SULFATE ION
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7ED6
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Crystal structure of Thermus thermophilus FakA ATP-binding domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable kinase
著者Nakatani, M, Nakahara, S, Fukui, K, Murakawa, T, Masui, R.
登録日2021-03-15
公開日2022-03-16
最終更新日2023-01-11
実験手法X-RAY DIFFRACTION (1.92850327 Å)
主引用文献Crystal structure of a nucleotide-binding domain of fatty acid kinase FakA from Thermus thermophilus HB8.
J.Struct.Biol., 214, 2022
7SOP
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LaM domain of human LARP1 in complex with AAAUAA RNA
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*UP*AP*A)-3')
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7ED9
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Crystal structure of selenomethionine-labeled Thermus thermophilus FakA ATP-binding domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable kinase
著者Nakatani, M, Nakahara, S, Fukui, K, Murakawa, T, Masui, R.
登録日2021-03-15
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01764154 Å)
主引用文献Crystal structure of a nucleotide-binding domain of fatty acid kinase FakA from Thermus thermophilus HB8.
J.Struct.Biol., 214, 2022
7SOR
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BU of 7sor by Molmil
LaM domain of human LARP1 in complex with AAA RNA
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Isoform 2 of La-related protein 1, ...
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOU
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BU of 7sou by Molmil
LaM domain of human LARP1 in complex with AAAAAA polynucleotide
分子名称: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3')
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
7SOS
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BU of 7sos by Molmil
LaM domain of human LARP1 in complex with AAAA RNA
分子名称: Isoform 2 of La-related protein 1, POTASSIUM ION, RNA (5'-R(*AP*AP*AP*A)-3')
著者Kozlov, G, Gehring, K.
登録日2021-11-01
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural basis of 3'-end poly(A) RNA recognition by LARP1.
Nucleic Acids Res., 50, 2022
8J56
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BU of 8j56 by Molmil
Crystal structure of the FlhDC complex from Cupriavidus necator
分子名称: Flagellar transcriptional regulator FlhC, Flagellar transcriptional regulator FlhD, ZINC ION
著者Cho, S.Y, Oh, H.B, Yoon, S.I.
登録日2023-04-21
公開日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Hexameric structure of the flagellar master regulator FlhDC from Cupriavidus necator and its interaction with flagellar promoter DNA.
Biochem.Biophys.Res.Commun., 672, 2023
7SOX
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BU of 7sox by Molmil
Cryo-electron tomography structure of membrane-bound EHD4 complex
分子名称: EH domain-containing protein 4
著者Melo, A.A, Noel, J.K, Daumke, O.
登録日2021-11-01
公開日2022-11-09
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Cryo-electron tomography reveals structural insights into the membrane remodeling mode of dynamin-like EHD filaments.
Nat Commun, 13, 2022
5TGA
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BU of 5tga by Molmil
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate), ...
著者Melnikov, S, Mailliot, J.
登録日2016-09-27
公開日2016-11-23
最終更新日2016-12-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Molecular insights into protein synthesis with proline residues.
EMBO Rep., 17, 2016
5FQR
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BU of 5fqr by Molmil
Selective estrogen receptor downregulator antagonists: Tetrahydroisoquinoline phenols 2.
分子名称: (E)-3-[4-[(1R)-6-HYDROXY-2-ISOBUTYL-3,4-DIHYDRO-1H-ISOQUINOLIN-1-YL]PHENYL]PROP-2-ENOIC ACID, ESTROGEN RECEPTOR
著者Scott, J.S, Bailey, A, Davies, R.D.M, Degorce, S.L, MacFaul, P.A, Gingell, H, Moss, T, Norman, R.A, Pink, J.H, Rabow, A.A, Roberts, B, Smith, P.D.
登録日2015-12-14
公開日2016-02-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Tetrahydroisoquinoline Phenols: Selective Estrogen Receptor Downregulator Antagonists with Oral Bioavailability in Rat.
Acs Med.Chem.Lett., 7, 2016
7EM7
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BU of 7em7 by Molmil
Crystal structure of the PI5P4Kbeta N203D-XTP complex
分子名称: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者Senda, M, Senda, T.
登録日2021-04-13
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
5FCT
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Mouse thymidylate synthase in ternary complex with FdUMP and methylenetetrahydrofolate.
分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, Thymidylate synthase
著者Dowiercial, A, Wilk, P, Jarmula, A, Rode, W.
登録日2015-12-15
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
7ALQ
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BU of 7alq by Molmil
human GCH-GFRP inhibitory complex 7-deaza-GTP bound
分子名称: 7,8-DIHYDROBIOPTERIN, 7-deaza-GTP, GTP cyclohydrolase 1, ...
著者Ebenhoch, R, Nar, H.
登録日2020-10-07
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Biophysical and structural investigation of the regulation of human GTP cyclohydrolase I by its regulatory protein GFRP.
J.Struct.Biol., 213, 2021
7T3E
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BU of 7t3e by Molmil
Structure of the sialic acid bound Tripartite ATP-independent Periplasmic (TRAP) periplasmic component SiaP from Photobacterium profundum
分子名称: N-acetyl-beta-neuraminic acid, SULFATE ION, TRAP-type C4-dicarboxylate transport system, ...
著者Davies, J.S, Currie, M.J, North, R.A, Dobson, R.C.J.
登録日2021-12-07
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter.
Nat Commun, 14, 2023
7T0Y
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The Ribosomal RNA Processing 1B Protein Phosphatase-1 Holoenzyme
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, FLUORIDE ION, ...
著者Srivastava, G, Page, R, Peti, W.
登録日2021-11-30
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The ribosomal RNA processing 1B:protein phosphatase 1 holoenzyme reveals non-canonical PP1 interaction motifs.
Cell Rep, 41, 2022
7W0S
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TRIM7 in complex with C-terminal peptide of 2C
分子名称: DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase TRIM7, GLYCEROL, ...
著者Zhang, H, Liang, X, Li, X.Z.
登録日2021-11-18
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022

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