PDB: 931 件ウェブページステータス検索Chemie searchBIRD

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3GL4	X-ray structure of photobleached killerred 分子名称: KillerRed 著者 Pletnev, S, Pletneva, N.V, Pletnev, V.Z. 登録日 2009-03-11 公開日 2009-09-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed. J.Biol.Chem., 284, 2009
3KCS	Crystal structure of PAmCherry1 in the dark state 分子名称: PAmCherry1 protein 著者 Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V. 登録日 2009-10-21 公開日 2009-11-17 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states. Proc.Natl.Acad.Sci.USA, 106, 2009
3KCT	CRYSTAL STRUCTURE OF PAmCherry1 in the photoactivated state 分子名称: PAmCherry1 protein 著者 Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V. 登録日 2009-10-21 公開日 2009-11-17 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states. Proc.Natl.Acad.Sci.USA, 106, 2009
1KYP	Crystal Structure of an Apo Green Fluorescent Protein Zn Biosensor 分子名称: Green Fluorescent Protein, MAGNESIUM ION 著者 Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2002-02-05 公開日 2002-04-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structural chemistry of a green fluorescent protein Zn biosensor. J.Am.Chem.Soc., 124, 2002
1JBZ	CRYSTAL STRUCTURE ANALYSIS OF A DUAL-WAVELENGTH EMISSION GREEN FLUORESCENT PROTEIN VARIANT AT HIGH PH 分子名称: 1,2-ETHANEDIOL, GREEN FLUORESCENT PROTEIN, MAGNESIUM ION 著者 Hanson, G.T, McAnaney, T.B, Park, E.S, Rendell, M.E.P, Yarbrough, D.K, Chu, S, Xi, L, Boxer, S.G, Montrose, M.H, Remington, S.J. 登録日 2001-06-07 公開日 2003-01-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Green Fluorescent Protein Variants as Ratiometric Dual Emission pH Sensors. 1. Structural Characterization and Preliminary Application. Biochemistry, 41, 2002
1RMO	Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code 分子名称: wunen-nonfunctional GFP fusion protein 著者 Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T. 登録日 2003-11-28 公開日 2004-06-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code Biol.Chem., 385, 2004
8G4E	Green Fluorescence Protein imaged on a cryo-EM imaging scaffold 分子名称: RCG-10 - Cryo-EM imaging scaffold subunit B fused to DARPin, Superfolder Green Fluorescent Protein 著者 Castells-Graells, R, Sawaya, M.R, Yeates, T.O. 登録日 2023-02-09 公開日 2023-08-09 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold. Proc.Natl.Acad.Sci.USA, 120, 2023
7PNN	mVenus released from fusion protein. 分子名称: CHLORIDE ION, mVenus 著者 Bloch, Y, Savvides, S.N. 登録日 2021-09-07 公開日 2021-11-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 mVenus released from fusion protein. To Be Published
1RMM	Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code 分子名称: SIGF1-GFP fusion protein 著者 Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T. 登録日 2003-11-28 公開日 2004-06-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code Biol.Chem., 385, 2004
8GOS	Crystal structure of fluorescent protein RasM 分子名称: RasM 著者 Adachi, M, Kagotani, Y, Shimizu, R. 登録日 2022-08-25 公開日 2023-09-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.01 Å) 主引用文献 Beat-frequency-resolved two-dimensional electronic spectroscopy: disentangling vibrational coherences in artificial fluorescent proteins with sub-10-fs visible laser pulses. Opt Express, 31, 2023
7PCZ	Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants 分子名称: ETHANOL, GLYCEROL, Green fluorescent protein 著者 Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K. 登録日 2021-08-04 公開日 2022-02-16 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant. Antioxid.Redox Signal., 37, 2022
7PCA	Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants 分子名称: ETHANOL, FORMAMIDE, GLYCEROL, ... 著者 Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K. 登録日 2021-08-03 公開日 2022-02-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant. Antioxid.Redox Signal., 37, 2022
1QYF	Crystal structure of matured green fluorescent protein R96A variant 分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, green-fluorescent protein 著者 Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2003-09-10 公開日 2003-09-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures. Proc.Natl.Acad.Sci.Usa, 100, 2003
7PD0	Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Green fluorescent protein, ... 著者 Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K. 登録日 2021-08-04 公開日 2022-02-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant. Antioxid.Redox Signal., 37, 2022
1QYQ	Crystal Structure of the cyclized S65G Y66G GFP variant 分子名称: green-fluorescent protein 著者 Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2003-09-11 公開日 2003-09-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures. Proc.Natl.Acad.Sci.Usa, 100, 2003
7QLI	Cis structure of rsKiiro at 290 K 分子名称: GLYCEROL, SULFATE ION, rsKiiro 著者 van Thor, J.J, Baxter, J.M. 登録日 2021-12-20 公開日 2023-07-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.155 Å) 主引用文献 Optical control of ultrafast structural dynamics in a fluorescent protein. Nat.Chem., 15, 2023
7QLK	Cis structure intermediate of rsKiiro Illuminated at 200 K 分子名称: GLYCEROL, SULFATE ION, rsKiiro 著者 van Thor, J.J, Baxter, J.M. 登録日 2021-12-20 公開日 2023-07-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.458 Å) 主引用文献 Optical control of ultrafast structural dynamics in a fluorescent protein. Nat.Chem., 15, 2023
7QLL	rsKiiro Thermal annealing at 290K of 200K Cis intermediate 分子名称: GLYCEROL, SULFATE ION, rsKiiro 著者 van Thor, J.J, Baxter, J.M. 登録日 2021-12-20 公開日 2023-07-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.324 Å) 主引用文献 Optical control of ultrafast structural dynamics in a fluorescent protein. Nat.Chem., 15, 2023
8G0I	High Affinity nanobodies against GFP 分子名称: CHLORIDE ION, Green fluorescent protein, LaG24 Nanobody, ... 著者 Ketaren, N.E, Rout, M.P, Almo, S. 登録日 2023-01-31 公開日 2024-03-20 最終更新日 2024-10-02 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Unique Binding and Stabilization Mechanisms Employed By and Engineered Into Nanobodies Biorxiv, 2023
7QGK	The mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer in its red state 分子名称: MAGNESIUM ION, The red form of the mRubyFT protein, Genetically Encoded Blue-to-Red Fluorescent Timer 著者 Boyko, K.M, Nikolaeva, A.Y, Gaivoronskii, F.A, Vlaskina, A.V, Subach, O.M, Popov, V.O, Subach, F.V. 登録日 2021-12-08 公開日 2022-03-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer. Int J Mol Sci, 23, 2022
1Q4B	S65T Q80R Green Fluorescent Protein (GFP) pH 5.5 分子名称: Green Fluorescent Protein 著者 Jain, R.K, Ranganathan, R. 登録日 2003-08-02 公開日 2004-02-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Local complexity of amino acid interactions in a protein core. Proc.Natl.Acad.Sci.USA, 101, 2004
8ILX	mCherry-LaM3 complex 分子名称: LAM3, MCherry fluorescent protein 著者 Liang, H, Liu, R, Ding, Y. 登録日 2023-03-05 公開日 2023-06-21 実験手法 X-RAY DIFFRACTION (3.29 Å) 主引用文献 Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies. Int J Mol Sci, 24, 2023
8IM1	mCherry-LaM1 complex 分子名称: LaM1, MCherry fluorescent protein, SULFATE ION 著者 Liang, H, Liu, R, Ding, Y. 登録日 2023-03-05 公開日 2023-06-21 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies. Int J Mol Sci, 24, 2023
1MYW	CRYSTAL STRUCTURE OF A YELLOW FLUORESCENT PROTEIN WITH IMPROVED MATURATION AND REDUCED ENVIRONMENTAL SENSITIVITY 分子名称: Green fluorescent protein 著者 Rekas, A, Alattia, J.R, Nagai, T, Miyawaki, A, Ikura, M. 登録日 2002-10-04 公開日 2003-01-14 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure of Venus, a Yellow Fluorescent Protein with Improved Maturation and Reduced Environmental Sensitivity J.Biol.Chem., 277, 2002
1RM9	Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code 分子名称: avermectin-sensitive chloride channel GluCl beta/cyan fluorescent protein fusion 著者 Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T. 登録日 2003-11-27 公開日 2004-06-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code Biol.Chem., 385, 2004

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