PDB: 45176 件ウェブページステータス検索Chemie searchBIRD

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2IX7	Structure of apo-calmodulin bound to unconventional myosin V 分子名称: CALMODULIN, CYSTEINE, MYOSIN-5A, ... 著者 Houdusse, A, Gaucher, J.F, Mui, S, Krementsova, E, Trybus, K.M, Cohen, C. 登録日 2006-07-07 公開日 2006-12-13 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of Apo-Calmodulin Bound to the First Two Iq Motifs of Myosin V Reveals Essential Recognition Features. Proc.Natl.Acad.Sci.USA, 103, 2006
2J3E	Dimerization is important for the GTPase activity of chloroplast translocon components atToc33 and psToc159 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, T7I23.11 PROTEIN 著者 Yeh, Y.-H, Kesavulu, M.M, Wu, S.-Z, Li, H.-M, Sun, Y.-J, Konozy, E.H, Hsiao, C.-D. 登録日 2006-08-21 公開日 2007-03-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Dimerization is Important for the Gtpase Activity of Chloroplast Translocon Components Attoc33 and Pstoc159. J.Biol.Chem., 282, 2007
2IY5	PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS complexed with tRNA and a phenylalanyl-adenylate analog 分子名称: ADENOSINE-5'-[PHENYLALANINOL-PHOSPHATE], MAGNESIUM ION, PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN, ... 著者 Moor, N, Kotik-Kogan, O, Tworowski, D, Sukhanova, M, Safro, M. 登録日 2006-07-12 公開日 2006-09-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The crystal structure of the ternary complex of phenylalanyl-tRNA synthetase with tRNAPhe and a phenylalanyl-adenylate analogue reveals a conformational switch of the CCA end. Biochemistry, 45, 2006
2IVK	Crystal structure of the periplasmic endonuclease Vvn complexed with a 16-bp DNA 分子名称: 5'-D(*AP*AP*TP*TP*CP*GP*AP*TP*CP*GP *AP*AP*TP*TP*C)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*T)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*TP*C)-3', ... 著者 Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S. 登録日 2006-06-14 公開日 2007-01-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases. Nucleic Acids Res., 35, 2007
2J5R	2.25 A resolution structure of the wild type malate dehydrogenase from Haloarcula marismortui after second radiation burn (radiation damage series) 分子名称: CHLORIDE ION, MALATE DEHYDROGENASE 著者 Fioravanti, E, Vellieux, F.M.D, Amara, P, Madern, D, Weik, M. 登録日 2006-09-19 公開日 2006-09-25 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Specific Radiation Damage to Acidic Residues and its Relation to Their Chemical and Structural Environment. J.Synchrotron Radiat., 14, 2007
2J5Q	2.15 A resolution structure of the wild type malate dehydrogenase from Haloarcula marismortui after first radiation burn (radiation damage series) 分子名称: CHLORIDE ION, MALATE DEHYDROGENASE 著者 Fioravanti, E, Vellieux, F.M.D, Amara, P, Madern, D, Weik, M. 登録日 2006-09-19 公開日 2006-09-21 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Specific Radiation Damage to Acidic Residues and its Relation to Their Chemical and Structural Environment. J.Synchrotron Radiat., 14, 2007
7S1I	Wild-type Escherichia coli stalled ribosome with antibiotic radezolid 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Young, I.D, Stojkovic, V, Tsai, K, Lee, D.J, Fraser, J.S, Galonic Fujimori, D. 登録日 2021-09-02 公開日 2022-03-02 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.48 Å) 主引用文献 Structural basis for context-specific inhibition of translation by oxazolidinone antibiotics. Nat.Struct.Mol.Biol., 29, 2022
7S1J	Wild-type Escherichia coli ribosome with antibiotic radezolid 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Young, I.D, Stojkovic, V, Tsai, K, Lee, D.J, Fraser, J.S, Galonic Fujimori, D. 登録日 2021-09-02 公開日 2022-03-02 実験手法 ELECTRON MICROSCOPY (2.47 Å) 主引用文献 Structural basis for context-specific inhibition of translation by oxazolidinone antibiotics. Nat.Struct.Mol.Biol., 29, 2022
2J0W	Crystal structure of E. coli aspartokinase III in complex with aspartate and ADP (R-state) 分子名称: ADENOSINE-5'-DIPHOSPHATE, ASPARTIC ACID, CHLORIDE ION, ... 著者 Kotaka, M, Ren, J, Lockyer, M, Hawkins, A.R, Stammers, D.K. 登録日 2006-08-07 公開日 2006-08-10 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structures of R- and T-State Escherichia Coli Aspartokinase III: Mechanisms of the Allosteric Transition and Inhibition by Lysine. J.Biol.Chem., 281, 2006
2J1Z	Human p53 core domain mutant M133L-V203A-N239Y-N268D-F270L 分子名称: CELLULAR TUMOR ANTIGEN P53, ZINC ION 著者 Joerger, A.C, Fersht, A.R. 登録日 2006-08-15 公開日 2006-09-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Basis for Understanding Oncogenic P53 Mutations and Designing Rescue Drugs. Proc.Natl.Acad.Sci.USA, 103, 2006
4EBA	Crystal structure of the Rna14-Rna15 complex 分子名称: Rna15, mRNA 3'-end-processing protein RNA14 著者 Paulson, A.R, Tong, L. 登録日 2012-03-23 公開日 2012-05-02 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal structure of the Rna14-Rna15 complex. Rna, 18, 2012
3MJ4	Crystal structure of UDP-galactopyranose mutase in complex with phosphonate analog of UDP-galactopyranose 分子名称: (((2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)methyl)phosphonic (((2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl phosphoric) anhydride, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Karunan Partha, S, Sadeghi-Khomami, A, Slowski, K, Kotake, T, Thomas, N.R, Jakeman, D.L, Sanders, D.A.R. 登録日 2010-04-12 公開日 2010-10-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Chemoenzymatic Synthesis, Inhibition Studies, and X-ray Crystallographic Analysis of the Phosphono Analog of UDP-Galp as an Inhibitor and Mechanistic Probe for UDP-Galactopyranose Mutase. J.Mol.Biol., 403, 2010
7SAS	Cryo-EM structure of TMEM106B fibrils extracted from a FTLD-TDP patient, polymorph 3 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Transmembrane protein 106B 著者 Cao, Q, Jiang, Y, Sawaya, M.R, Eisenberg, D.S. 登録日 2021-09-23 公開日 2022-03-09 最終更新日 2022-05-25 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Amyloid fibrils in FTLD-TDP are composed of TMEM106B and not TDP-43. Nature, 605, 2022
2J8M	Structure of P. aeruginosa acetyltransferase PA4866 分子名称: ACETYLTRANSFERASE PA4866 FROM P. AERUGINOSA, AZIDE ION, GLYCEROL, ... 著者 Davies, A.M, Tata, R, Beavil, R.L, Sutton, B.J, Brown, P.R. 登録日 2006-10-26 公開日 2007-02-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 L-Methionine Sulfoximine, But not Phosphinothricin, is a Substrate for an Acetyltransferase (Gene Pa4866) from Pseudomonas Aeruginosa: Structural and Functional Studies. Biochemistry, 46, 2007
2J8R	Structure of P. aeruginosa acetyltransferase PA4866 solved in complex with L-Methionine sulfoximine 分子名称: (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, ACETYLTRANSFERASE PA4866 FROM P. AERUGINOSA, AZIDE ION, ... 著者 Davies, A.M, Tata, R, Beavil, R.L, Sutton, B.J, Brown, P.R. 登録日 2006-10-27 公開日 2007-02-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 L-Methionine Sulfoximine, But not Phosphinothricin, is a Substrate for an Acetyltransferase (Gene Pa4866) from Pseudomonas Aeruginosa: Structural and Functional Studies. Biochemistry, 46, 2007
2J8N	Structure of P. aeruginosa acetyltransferase PA4866 solved at room temperature 分子名称: ACETYLTRANSFERASE PA4866 FROM P. AERUGINOSA 著者 Davies, A.M, Tata, R, Beavil, R.L, Sutton, B.J, Brown, P.R. 登録日 2006-10-26 公開日 2007-02-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 l-Methionine sulfoximine, but not phosphinothricin, is a substrate for an acetyltransferase (gene PA4866) from Pseudomonas aeruginosa: structural and functional studies. Biochemistry, 46, 2007
2J7L	E. coli P Pilus chaperone PapD in complex with a pilus biogenesis inhibitor, pilicide 2c 分子名称: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD 著者 Remaut, H, Pinkner, J.S, Hultgren, S.J, Almqvist, F, Waksman, G. 登録日 2006-10-12 公開日 2006-11-01 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Rationally Designed Small Compounds Inhibit Pilus Biogenesis in Uropathogenic Bacteria. Proc.Natl.Acad.Sci.USA, 103, 2006
2J6U	Ternary complex of Sulfolobus solfataricus Dpo4 DNA polymerase, O6- methylguanine modified DNA, and dGTP. 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*T)-3', 5'-D(*TP*CP*AP*C G32P*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3', ... 著者 Eoff, R.L, Irimia, A, Guengerich, F.P, Egli, M. 登録日 2006-10-04 公開日 2006-11-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Sulfolobus Solfataricus DNA Polymerase Dpo4 is Partially Inhibited by "Wobble" Pairing between O6- Methylguanine and Cytosine, But Accurate Bypass is Preferred. J.Biol.Chem., 282, 2007
7SAR	Cryo-EM structure of TMEM106B fibrils extracted from a FTLD-TDP patient, polymorph 2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Transmembrane protein 106B 著者 Cao, Q, Jiang, Y, Sawaya, M.R, Eisenberg, D.S. 登録日 2021-09-23 公開日 2022-03-09 最終更新日 2022-05-25 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Amyloid fibrils in FTLD-TDP are composed of TMEM106B and not TDP-43. Nature, 605, 2022
3MKV	Crystal structure of amidohydrolase eaj56179 分子名称: CARBONATE ION, GLYCEROL, PUTATIVE AMIDOHYDROLASE, ... 著者 Patskovsky, Y, Bonanno, J, Ozyurt, S, Sauder, J.M, Freeman, J, Wu, B, Smith, D, Bain, K, Rodgers, L, Wasserman, S.R, Raushel, F.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2010-04-15 公開日 2010-04-28 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Functional identification and structure determination of two novel prolidases from cog1228 in the amidohydrolase superfamily . Biochemistry, 49, 2010
2IZW	Crystal structure of Ryegrass Mottle Virus 分子名称: RYEGRASS MOTTLE VIRUS COAT PROTEIN 著者 Plevka, P, Tars, K, Zeltins, A, Balke, I, Truve, E, Liljas, L. 登録日 2006-07-27 公開日 2007-10-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The Three-Dimensional Structure of Ryegrass Mottle Virus at 2.9 A Resolution. Virology, 369, 2007
2J8S	Drug Export Pathway of Multidrug Exporter AcrB Revealed by DARPin Inhibitors 分子名称: ACRIFLAVINE RESISTANCE PROTEIN B, DARPIN, DODECYL-ALPHA-D-MALTOSIDE, ... 著者 Sennhauser, G, Amstutz, P, Briand, C, Storchenegger, O, Gruetter, M.G. 登録日 2006-10-27 公開日 2007-01-23 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Drug Export Pathway of Multidrug Exporter Acrb Revealed by Darpin Inhibitors. Plos Biol., 5, 2007
2J2Z	X-Ray Structure of the Chaperone PapD in complex with the Pilus terminator subunit PapH at 2.3 Angstrom resolution 分子名称: CHAPERONE PROTEIN PAPD, COBALT (II) ION, PAP FIMBRIAL MINOR PILIN PROTEIN, ... 著者 Verger, D, Miller, E, Remaut, H, Waksman, G, Hultgren, S. 登録日 2006-08-17 公開日 2006-11-08 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Molecular Mechanism of P Pilus Termination in Uropathogenic Escherichia Coli. Embo Rep., 7, 2006
2IU3	Crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase 分子名称: 1,5-DIHYDROIMIDAZO[4,5-C][1,2,6]THIADIAZIN-4(3H)-ONE 2,2-DIOXIDE, BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH, POTASSIUM ION 著者 Xu, L, Chong, Y, Hwang, I, D'Onofrio, A, Amore, K, Beardsley, G.P, Li, C, Olson, A.J, Boger, D.L, Wilson, I.A. 登録日 2006-05-27 公開日 2007-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structure-based design, synthesis, evaluation, and crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase. J. Biol. Chem., 282, 2007
2J3N	X-ray structure of human thioredoxin reductase 1 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Fritz-Wolf, K, Urig, S, Becker, K. 登録日 2006-08-22 公開日 2007-07-03 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The Structure of Human Thioredoxin Reductase 1 Provides Insights Into C-Terminal Rearrangements During Catalysis. J.Mol.Biol., 370, 2007

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