PDB: 237423 件ウェブページステータス検索Chemie searchBIRD

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6D6E	Triclinic lysozyme (295 K) in the presence of 47% xylose 分子名称: Lysozyme C, NITRATE ION 著者 Juers, D.H. 登録日 2018-04-20 公開日 2018-09-19 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order. Acta Crystallogr D Struct Biol, 74, 2018
6D6F	Triclinic lysozyme cryocooled to 100 K with 47% xylose as cryoprotectant 分子名称: Lysozyme C, NITRATE ION, alpha-D-xylopyranose 著者 Juers, D.H. 登録日 2018-04-20 公開日 2018-09-19 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order. Acta Crystallogr D Struct Biol, 74, 2018
6D6G	Triclinic lysozyme (295 K) in the presence of 47% MPD 分子名称: Lysozyme C, NITRATE ION 著者 Juers, D.H. 登録日 2018-04-20 公開日 2018-09-19 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order. Acta Crystallogr D Struct Biol, 74, 2018
6D6H	Triclinic lysozyme cryocooled to 100 K with 47% MPD as cryoprotectant 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Lysozyme C, NITRATE ION 著者 Juers, D.H. 登録日 2018-04-20 公開日 2018-09-19 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.000064 Å) 主引用文献 The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order. Acta Crystallogr D Struct Biol, 74, 2018
6D6I	Ube2V1 in complex with ubiquitin variant Ubv.V1.1 and Ube2N/Ubc13 分子名称: Ubiquitin-conjugating enzyme E2 N, Ubiquitin-conjugating enzyme E2 variant 1, Ubv.V1.1 著者 Ceccarelli, D.F, Garg, P, Keszei, A, Sidhu, S, Sicheri, F. 登録日 2018-04-21 公開日 2019-07-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.551 Å) 主引用文献 Structural and Functional Analysis of Ubiquitin-based Inhibitors That Target the Backsides of E2 Enzymes. J.Mol.Biol., 432, 2020
6D6J	Crystal structure of HIT family hydrolase from Legionella pneumophila Philadelphia 1 分子名称: CHLORIDE ION, HIT family hydrolase, ZINC ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-04-21 公開日 2018-05-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Crystal structure of HIT family hydrolase from Legionella pneumophila Philadelphia 1 to be published
6D6K	Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii 分子名称: Polyribonucleotide nucleotidyltransferase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-04-21 公開日 2018-05-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii to be published
6D6L	The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 14 分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-chlorobenzoate, Transcriptional activator protein LasR 著者 Dong, S.H, Nair, S.K. 登録日 2018-04-21 公開日 2018-08-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR. Cell Chem Biol, 25, 2018
6D6M	The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 15 分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-bromobenzoate, Transcriptional activator protein LasR 著者 Dong, S.H, Nair, S.K. 登録日 2018-04-21 公開日 2018-08-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR. Cell Chem Biol, 25, 2018
6D6N	The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 16 分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-methoxybenzoate, PHENYLALANINE, Transcriptional activator protein LasR 著者 Dong, S.H, Nair, S.K. 登録日 2018-04-21 公開日 2018-08-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR. Cell Chem Biol, 25, 2018
6D6O	The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 17 分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl octanoate, Transcriptional activator protein LasR 著者 Dong, S.H, Nair, S.K. 登録日 2018-04-21 公開日 2018-08-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR. Cell Chem Biol, 25, 2018
6D6P	The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 19 分子名称: N-{[3,5-dibromo-2-(methoxymethoxy)phenyl]methyl}-2-nitrobenzamide, Transcriptional activator protein LasR 著者 Dong, S.H, Nair, S.K. 登録日 2018-04-21 公開日 2018-08-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR. Cell Chem Biol, 25, 2018
6D6Q	Human nuclear exosome-MTR4 RNA complex - overall reconstruction 分子名称: DNA/RNA (62-MER), Exosome RNA helicase MTR4, Exosome complex component CSL4, ... 著者 Weick, E.-M, Lima, C.D. 登録日 2018-04-22 公開日 2018-06-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex. Cell, 173, 2018
6D6R	Human nuclear exosome-MTR4 RNA complex - composite map after focused reconstruction 分子名称: DNA/RNA (62-MER), Exosome RNA helicase MTR4, Exosome complex component CSL4, ... 著者 Weick, E.-M, Lima, C.D. 登録日 2018-04-22 公開日 2018-06-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex. Cell, 173, 2018
6D6S	Solution structure of Trigger Factor dimer 分子名称: Trigger factor 著者 Saio, T, Kawagoe, S, Ishimori, K, Kalodimos, C.G. 登録日 2018-04-22 公開日 2018-06-13 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Oligomerization of a molecular chaperone modulates its activity. Elife, 7, 2018
6D6T	Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation B 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, GAMMA-AMINO-BUTANOIC ACID, ... 著者 Zhu, S, Noviello, C.M, Teng, J, Walsh Jr, R.M, Kim, J.J, Hibbs, R.E. 登録日 2018-04-22 公開日 2018-06-27 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.86 Å) 主引用文献 Structure of a human synaptic GABAAreceptor. Nature, 559, 2018
6D6U	Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation A 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, GAMMA-AMINO-BUTANOIC ACID, ... 著者 Zhu, S, Noviello, C.M, Teng, J, Walsh Jr, R.M, Kim, J.J, Hibbs, R.E. 登録日 2018-04-22 公開日 2018-06-27 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.92 Å) 主引用文献 Structure of a human synaptic GABAAreceptor. Nature, 559, 2018
6D6V	CryoEM structure of Tetrahymena telomerase with telomeric DNA at 4.8 Angstrom resolution 分子名称: DNA (5'-D(P*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*G)-3'), RNA (159-MER), Telomerase associated protein p65, ... 著者 Jiang, J, Wang, Y, Susac, L, Chan, H, Basu, R, Zhou, Z.H, Feigon, J. 登録日 2018-04-22 公開日 2018-05-30 最終更新日 2025-05-14 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structure of Telomerase with Telomeric DNA. Cell, 173, 2018
6D6W	Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate 分子名称: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ... 著者 Walton, W.G, Pellock, S.J, Redinbo, M.R. 登録日 2018-04-23 公開日 2018-10-17 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis. J. Biol. Chem., 293, 2018
6D6X	HSP40 co-chaperone Sis1 J-domain 分子名称: Type II HSP40 co-chaperone 著者 Pinheiro, G.M.S, Amorim, G.C, Iqbal, A, Ramos, C.H.I, Almeida, F.C.L. 登録日 2018-04-23 公開日 2019-05-01 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution NMR investigation on the structure and function of the isolated J-domain from Sis1: Evidence of transient inter-domain interactions in the full-length protein. Arch.Biochem.Biophys., 669, 2019
6D6Y	AprA Methyltransferase 2 - GNAT didomain in complex with SAH 分子名称: AprA Methyltransferase 2, S-ADENOSYL-L-HOMOCYSTEINE, trimethylamine oxide 著者 Sikkema, A.P, Smith, J.L. 登録日 2018-04-23 公開日 2018-05-09 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.246 Å) 主引用文献 Biosynthesis of t-Butyl in Apratoxin A: Functional Analysis and Architecture of a PKS Loading Module. ACS Chem. Biol., 13, 2018
6D6Z	Structure of the malate racemase apoprotein from Thermoanaerobacterium thermosaccharolyticum 分子名称: Malate racemase Mar2 著者 Fellner, M, Hausinger, R.P, Hu, J. 登録日 2018-04-23 公開日 2019-04-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Uncovering a superfamily of nickel-dependent hydroxyacid racemases and epimerases. Sci Rep, 10, 2020
6D71	Crystal Structure of the Human Miro1 N-terminal GTPase bound to GTP 分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mitochondrial Rho GTPase 1 著者 Smith, K.P, Focia, P.J, Rice, S.E, Freymann, D.M. 登録日 2018-04-23 公開日 2019-10-09 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.7180779 Å) 主引用文献 Insight into human Miro1/2 domain organization based on the structure of its N-terminal GTPase. J.Struct.Biol., 212, 2020
6D72	Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis in complex with calcium ions. 分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, MALONATE ION, ... 著者 Filippova, E.V, Minasov, G, Kiryukhina, O, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2018-04-23 公開日 2018-05-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis in complex with calcium ions. To Be Published
6D73	Cryo-EM structure of the zebrafish TRPM2 channel in the presence of Ca2+ 分子名称: CALCIUM ION, Transient receptor potential cation channel, subfamily M 著者 Yin, Y, Wu, M, Borschel, W.F, Lander, G.C, Lee, S.-Y. 登録日 2018-04-23 公開日 2019-05-15 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Visualizing structural transitions of ligand-dependent gating of the TRPM2 channel. Nat Commun, 10, 2019

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