PDB: 20505 件ウェブページステータス検索Chemie searchBIRD

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6LF2	SeviL bound to asialo-GM1 saccharide 分子名称: SeviL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Kamata, K, Ozeki, Y, Park, S.-Y, Tame, J.R.H. 登録日 2019-11-28 公開日 2020-12-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata. Sci Rep, 10, 2020
6R5B	Crystal structure of PPEP-1(W103H/E143A/Y178F) in complex with substrate peptide Ac-EVNPPVP-CONH2 分子名称: ACE-GLU-VAL-ASN-PRO-PRO-VAL-LPD, Pro-Pro endopeptidase 著者 Pichlo, C, Wojtalla, F, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R54	Crystal structure of PPEP-1(E184A) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICKEL (II) ION, Pro-Pro endopeptidase, ... 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.417 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6L50	Crystal structure of Zika NS2B-NS3 protease with compound 16 分子名称: 2-sulfanylidene-1,3-thiazolidin-4-one, NS3 protease, Serine protease subunit NS2B 著者 Quek, J.P. 登録日 2019-10-21 公開日 2020-07-15 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Identification and structural characterization of small molecule fragments targeting Zika virus NS2B-NS3 protease. Antiviral Res., 175, 2020
6RA4	Human ARGONAUTE-2 PAZ DOMAIN (214-347) IN COMPLEX WITH CGUGACUCU 分子名称: GLYCEROL, Protein argonaute-2, RNA (5'-R(*CP*GP*UP*GP*AP*CP*UP*CP*U)-3') 著者 Rondeau, J.-M, Bourgier, E. 登録日 2019-04-05 公開日 2019-05-08 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 How to Computationally Stack the Deck for Hit-to-Lead Generation: In Silico Molecular Interaction Energy Profiling for de Novo siRNA Guide Strand Surrogate Selection. J.Chem.Inf.Model., 59, 2019
6R4X	Crystal structure of PPEP-1(E143A/Y178F) in complex with substrate peptide Ac-EVNPAVP-CONH2 分子名称: ACE-GLU-VAL-ASN-PRO-ALA-VAL-LPD, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.831 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R55	Crystal structure of PPEP-1(E184K) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.401 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R53	Crystal structure of PPEP-1(K101R) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.798 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R52	Crystal structure of PPEP-1(K101A) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.022 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
5HR2	Crystal structure of thioredoxin L94A mutant 分子名称: COPPER (II) ION, Thioredoxin 著者 Noguera, M.E, Vazquez, D.S, Howard, E.I, Cousido-Siah, A, Mitschler, A, Podjarny, A, Santos, J. 登録日 2016-01-22 公開日 2017-02-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural variability of E. coli thioredoxin captured in the crystal structures of single-point mutants. Sci Rep, 7, 2017
6R3V	Crystal Structure of RhoA-GDP-Pi in Complex with RhoGAP 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Jin, Y. 登録日 2019-03-21 公開日 2019-05-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A GAP-GTPase-GDP-PiIntermediate Crystal Structure Analyzed by DFT Shows GTP Hydrolysis Involves Serial Proton Transfers. Chemistry, 25, 2019
5HVI	Crystal structure of TEM1 beta-lactamase 分子名称: Beta-lactamase TEM 著者 Roose, B.W, Dmochowski, I.J. 登録日 2016-01-28 公開日 2017-06-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 A Structural Basis for129Xe Hyper-CEST Signal in TEM-1 beta-Lactamase. Chemphyschem, 2018
6R5A	Crystal structure of PPEP-1(W103F) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
5HRJ	Crystal structure of the scavenger receptor cysteine-rich domain 5 (SRCR5) from porcine CD163 分子名称: Scavenger receptor cysteine-rich type 1 protein M130 著者 Ma, H, Jiang, L, Qiao, S, Zhang, G, Li, R. 登録日 2016-01-23 公開日 2017-07-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of the scavenger receptor cysteine-rich domain 5 (SRCR5) from porcine CD163 To Be Published
5HS8	Crystal structure of the diamide-treated YodB from B. subtilis 分子名称: HTH-type transcriptional regulator YodB 著者 Lee, S.J, Lee, I.G, Lee, B.J. 登録日 2016-01-25 公開日 2016-08-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Two distinct mechanisms of transcriptional regulation by the redox sensor YodB Proc.Natl.Acad.Sci.USA, 113, 2016
5HW1	Crystal structure of TEM1 beta-lactamase in the presence of 1.2 MPa xenon 分子名称: Beta-lactamase TEM, XENON 著者 Roose, B.W, Dmochowski, I.J. 登録日 2016-01-28 公開日 2017-06-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A Structural Basis for129Xe Hyper-CEST Signal in TEM-1 beta-Lactamase. Chemphyschem, 2018
7PNP	Human Angiogenin mutant-S28A 分子名称: Angiogenin 著者 Papaioannou, O.S.E, Leonidas, D.D. 登録日 2021-09-07 公開日 2022-05-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and Biochemical Characterization of the Human Angiogenin-Proliferating Cell Nuclear Antigen Interaction. Biochemistry, 2023
6R0J	The N-terminal domain of rhomboid protease YqgP 分子名称: Rhomboid family serine protease 著者 Began, J, Strisovsky, K, Veverka, V. 登録日 2019-03-13 公開日 2020-01-08 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Rhomboid intramembrane protease YqgP licenses bacterial membrane protein quality control as adaptor of FtsH AAA protease. Embo J., 39, 2020
6KVG	The solution structure of human Orc6 分子名称: Origin recognition complex subunit 6 著者 Liu, C, Xu, N, You, Y, Zhu, G. 登録日 2019-09-04 公開日 2020-09-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis of DNA replication origin recognition by human Orc6 protein binding with DNA. Nucleic Acids Res., 48, 2020
6KQV	Solution Structure of the UbL Domain of USP19 分子名称: Ubiquitin carboxyl-terminal hydrolase 19 著者 Xue, W, Hu, H.Y. 登録日 2019-08-19 公開日 2020-08-19 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Domain interactions reveal auto-inhibition of the deubiquitinating enzyme USP19 and its activation by HSP90 in the modulation of huntingtin aggregation. Biochem.J., 477, 2020
5IP4	X-RAY STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN 分子名称: Neuronal migration protein doublecortin, XA4551 NANOBODY AGAINST C-DCX 著者 Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R. 登録日 2016-03-09 公開日 2016-05-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies. J.Biol.Chem., 291, 2016
6LXN	Crystal structure of C-terminal DNA-binding domain of Escherichia coli OmpR in complex with F1-DNA 分子名称: DNA (27-MER), SULFATE ION, Transcriptional regulatory protein OmpR 著者 Sadotra, S, Chen, C, Hsu, C.H. 登録日 2020-02-11 公開日 2020-12-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Structural basis for promoter DNA recognition by the response regulator OmpR. J.Struct.Biol., 213, 2020
6LTY	DNA bound antitoxin HigA3 分子名称: DNA (5'-D(P*CP*CP*AP*CP*GP*AP*GP*AP*TP*AP*TP*AP*AP*CP*CP*TP*AP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*TP*AP*GP*GP*TP*TP*AP*TP*AP*TP*CP*TP*CP*GP*TP*GP*G)-3'), Putative antitoxin HigA3 著者 Park, J.Y, Lee, B.J. 登録日 2020-01-23 公開日 2020-07-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Induced DNA bending by unique dimerization of HigA antitoxin. Iucrj, 7, 2020
5INB	RepoMan-PP1g (protein phosphatase 1, gamma isoform) holoenzyme complex 分子名称: Cell division cycle-associated protein 2, GLYCEROL, MALONATE ION, ... 著者 Kumar, G.S, Peti, W, Page, R. 登録日 2016-03-07 公開日 2016-10-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The Ki-67 and RepoMan mitotic phosphatases assemble via an identical, yet novel mechanism. Elife, 5, 2016
6LTZ	Induced DNA bending by unique dimerization of HigA antitoxin 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Park, J.Y, Lee, B.J. 登録日 2020-01-23 公開日 2020-07-15 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.973 Å) 主引用文献 Induced DNA bending by unique dimerization of HigA antitoxin. Iucrj, 7, 2020

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