PDB: 46200 件ウェブページステータス検索Chemie searchBIRD

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4DLE	Ternary Structure of the large Fragment of Taq DNA Polymerase: 4-Fluoroproline Variant 分子名称: 1,2-ETHANEDIOL, 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA polymerase I, ... 著者 Holzberger, B, Obeid, S, Welte, W, Diederichs, K, Marx, A. 登録日 2012-02-06 公開日 2012-11-28 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Structural insights into the potential of 4-fluoroproline to modulate biophysical properties of protein Chem Sci, 3, 2012
6GYP	Cryo-EM structure of the CBF3-core-Ndc10-DBD complex of the budding yeast kinetochore 分子名称: ARGININE, ASPARAGINE, Centromere DNA-binding protein complex CBF3 subunit A, ... 著者 Yan, K, Zhang, Z, Yang, J, McLaughlin, S.H, Barford, D. 登録日 2018-07-01 公開日 2018-12-05 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Architecture of the CBF3-centromere complex of the budding yeast kinetochore. Nat. Struct. Mol. Biol., 25, 2018
1RYS	REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION 分子名称: 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*A)-3', 5'-D(*TP*CP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ... 著者 Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W. 登録日 2003-12-22 公開日 2004-02-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Replication of a Cis-Syn Thymine Dimer at Atomic Resolution Nature, 424, 2003
2CHP	Crystal structure of the dodecameric ferritin MrgA from B. subtilis 168 分子名称: METALLOREGULATION DNA-BINDING STRESS PROTEIN, PHOSPHATE ION 著者 Essen, L.-O, Morbitzer, A. 登録日 2006-03-16 公開日 2007-04-03 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Morphology of Dry Solid-Supported Protein Monolayers Dependent on the Substrate and Protein Surface Properties. Langmuir, 22, 2006
1ODD	OMPR C-TERMINAL DOMAIN (OMPR-C) FROM ESCHERICHIA COLI 分子名称: TRANSCRIPTIONAL REGULATORY PROTEIN OMPR 著者 Kondou, H, Nakagawa, A, Tanaka, I. 登録日 1996-10-31 公開日 1997-05-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Escherichia coli positive regulator OmpR has a large loop structure at the putative RNA polymerase interaction site. Nat.Struct.Biol., 4, 1997
3FYH	Recombinase in complex with ADP and metatungstate 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA repair and recombination protein radA, MAGNESIUM ION, ... 著者 Li, Y, He, Y, Luo, Y. 登録日 2009-01-22 公開日 2009-09-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of an archaeal Rad51 homologue in complex with a metatungstate inhibitor. Biochemistry, 48, 2009
4NB5	Crystal Structure of a transcriptional regulator 分子名称: 1,3-dihydroxypropan-2-yl octadecanoate, DNA binding protein 著者 Su, C.-C, Radhakrishnan, A, Yu, E.W. 登録日 2013-10-22 公開日 2014-04-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.641 Å) 主引用文献 Crystal Structure of the Transcriptional Regulator Rv0678 of Mycobacterium tuberculosis. J.Biol.Chem., 289, 2014
6LNL	ASFV core shell protein p15 分子名称: 60 kDa polyprotein 著者 Guo, F, Shi, Y, Peng, G. 登録日 2019-12-30 公開日 2020-12-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9286 Å) 主引用文献 The structural basis of African swine fever virus core shell protein p15 binding to DNA. Faseb J., 35, 2021
1S10	Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ... 著者 Ling, H, Boudsocq, F, Woodgate, R, Yang, W. 登録日 2004-01-05 公開日 2004-03-30 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts. Mol.Cell, 13, 2004
1S0N	Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*CP*G)-3', 5'-D(*TP*AP*CP*GP*AP*CP*GP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ... 著者 Ling, H, Boudsocq, F, Woodgate, R, Yang, W. 登録日 2003-12-31 公開日 2004-03-30 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts. Mol.Cell, 13, 2004
1S0O	Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift 分子名称: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', CALCIUM ION, ... 著者 Ling, H, Boudsocq, F, Woodgate, R, Yang, W. 登録日 2003-12-31 公開日 2004-03-30 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts. Mol.Cell, 13, 2004
1NGM	Crystal structure of a yeast Brf1-TBP-DNA ternary complex 分子名称: 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3', 5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3', Transcription factor IIIB BRF1 subunit, ... 著者 Juo, Z.S, Kassavetis, G.A, Wang, J, Geiduschek, E.P, Sigler, P.B. 登録日 2002-12-17 公開日 2003-03-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Crystal structure of a transcription factor IIIB core interface ternary complex Nature, 422, 2003
8GYK	CryoEM structure of the RAD51_ADP filament 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA repair protein RAD51 homolog 1, MAGNESIUM ION 著者 Miki, Y, Luo, S.C, Ho, M.C. 登録日 2022-09-22 公開日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 A RAD51-ADP double filament structure unveils the mechanism of filament dynamics in homologous recombination. Nat Commun, 14, 2023
1Y1W	Complete RNA Polymerase II elongation complex 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*T)-3', 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP*T)-3', 5'-R(*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3', ... 著者 Cramer, P, Kettenberger, H, Armache, K.-J. 登録日 2004-11-19 公開日 2005-01-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS Mol.Cell, 16, 2004
2Q2E	Crystal structure of the topoisomerase VI holoenzyme from Methanosarcina mazei 分子名称: Type 2 DNA topoisomerase 6 subunit B, Type II DNA topoisomerase VI subunit A 著者 Corbett, K.D, Benedetti, P, Berger, J.M. 登録日 2007-05-28 公開日 2007-07-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Holoenzyme assembly and ATP-mediated conformational dynamics of topoisomerase VI Nat.Struct.Mol.Biol., 14, 2007
7LBX	Crystal structure of TFAM (mitochondrial transcription factor A) in complex with LSP 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*TP*TP*AP*AP*CP*AP*GP*TP*CP*AP*CP*CP*CP*CP*CP*CP*AP*AP*CP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*AP*GP*TP*TP*GP*GP*GP*GP*GP*GP*TP*GP*AP*CP*TP*GP*TP*TP*AP*A)-3'), ... 著者 Choi, W.S, Garcia-Diaz, M. 登録日 2021-01-09 公開日 2022-01-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A minimal motif for sequence recognition by mitochondrial transcription factor A (TFAM). Nucleic Acids Res., 50, 2022
2Z90	Crystal Structure of the Second Dps from Mycobacterium smegmatis 分子名称: CHLORIDE ION, FE (II) ION, MAGNESIUM ION, ... 著者 Roy, S, Saraswathi, R, Chatterji, D, Vijayan, M. 登録日 2007-09-13 公開日 2008-04-22 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural studies on the second Mycobacterium smegmatis Dps: invariant and variable features of structure, assembly and function. J.Mol.Biol., 375, 2008
1ARR	RELAXATION MATRIX REFINEMENT OF THE SOLUTION STRUCTURE OF THE ARC REPRESSOR 分子名称: ARC REPRESSOR 著者 Bonvin, A.M.J.J, Vis, H, Burgering, M.J.M, Breg, J.N, Boelens, R, Kaptein, R. 登録日 1993-08-24 公開日 1994-01-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Nuclear magnetic resonance solution structure of the Arc repressor using relaxation matrix calculations. J.Mol.Biol., 236, 1994
1ARQ	RELAXATION MATRIX REFINEMENT OF THE SOLUTION STRUCTURE OF THE ARC REPRESSOR 分子名称: ARC REPRESSOR 著者 Bonvin, A.M.J.J, Vis, H, Burgering, M.J.M, Breg, J.N, Boelens, R, Kaptein, R. 登録日 1993-08-24 公開日 1994-01-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Nuclear magnetic resonance solution structure of the Arc repressor using relaxation matrix calculations. J.Mol.Biol., 236, 1994
6F07	CBF3 Core Complex 分子名称: Centromere DNA-binding protein complex CBF3 subunit B, Suppressor of kinetochore protein 1, ZINC ION 著者 Leber, V, Singleton, M.R. 登録日 2017-11-17 公開日 2017-12-13 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis for assembly of the CBF3 kinetochore complex. EMBO J., 37, 2018
7F2N	Crystal structure of SSB from Klebsiella pneumonia. 分子名称: Single-stranded DNA-binding protein 著者 Lin, E.S, Huang, Y.H, Huang, C.Y. 登録日 2021-06-11 公開日 2021-11-10 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Characterization of the Chimeric PriB-SSBc Protein. Int J Mol Sci, 22, 2021
3QEX	RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dGTP Opposite dT 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3'), ... 著者 Xia, S, Konigsberg, W.H, Wang, J. 登録日 2011-01-20 公開日 2012-01-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Hydrogen-Bonding Capability of Difluorotoluene Nucleoside in Replication Complexes To be Published
8VCT	CyoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 6:2:1 stoichiometry from E. coli Tn7 bound to ATPgS and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (50-MER), MAGNESIUM ION, ... 著者 Shen, Y, Guarne, A. 登録日 2023-12-14 公開日 2024-07-31 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Assembly of the Tn7 targeting complex by a regulated stepwise process. Mol.Cell, 84, 2024
8OUZ	Human RAD51B-RAD51C-RAD51D-XRCC2 (BCDX2) complex, 2.2 A resolution 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA repair protein RAD51 homolog 2, ... 著者 Greenhough, L.A, Liang, C.C, West, S.C. 登録日 2023-04-25 公開日 2023-06-21 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (2.2 Å) 主引用文献 Structure and function of the RAD51B-RAD51C-RAD51D-XRCC2 tumour suppressor. Nature, 619, 2023
3QET	RB69 DNA Polymerase (L561A/S565G/Y567A) Ternary Complex with dTTP Opposite dT 分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*(DOC))-3'), DNA (5'-D(*TP*CP*AP*TP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ... 著者 Xia, S, Konigsberg, W.H, Wang, J. 登録日 2011-01-20 公開日 2012-01-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Hydrogen-Bonding Capability of Difluorotoluene Nucleoside in Replication Complexes To be Published

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