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2PPG
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Crystal structure of putative isomerase from Sinorhizobium meliloti
分子名称: Putative isomerase
著者Ramagopal, U.A, Toro, R, Dickey, M, Logan, C, Groshong, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-04-30
公開日2007-05-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structure of putative isomerase from Sinorhizobium meliloti.
To be Published
3GEA
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BU of 3gea by Molmil
Donor strand complemented FaeG monomer of F4 variant ad
分子名称: GLYCEROL, K88 fimbrial protein AD, SULFATE ION
著者Van Molle, I, Moonens, K, Garcia-Pino, A, Buts, L, Bouckaert, J, De Greve, H.
登録日2009-02-25
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Structural and thermodynamic characterization of pre- and postpolymerization states in the F4 fimbrial subunit FaeG
J.Mol.Biol., 394, 2009
3R3Y
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BU of 3r3y by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - His280Asn/Fluoroacetate
分子名称: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase
著者Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-03-16
公開日2011-05-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
2PRQ
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BU of 2prq by Molmil
X-ray crystallographic characterization of the Co(II)-substituted Tris-bound form of the aminopeptidase from Aeromonas proteolytica
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bacterial leucyl aminopeptidase, COBALT (II) ION
著者Munih, P, Moulin, A, Stamper, C.C, Bennet, B, Ringe, D, Petsko, G.A, Holz, R.C.
登録日2007-05-04
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献X-ray crystallographic characterization of the Co(II)-substituted Tris-bound form of the aminopeptidase from Aeromonas proteolytica.
J.Inorg.Biochem., 101, 2007
2PV3
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BU of 2pv3 by Molmil
Crystallographic Structure of SurA fragment lacking the second peptidyl-prolyl isomerase domain complexed with peptide NFTLKFWDIFRK
分子名称: C-peptide, Chaperone surA
著者Xu, X, McKay, D.B.
登録日2007-05-09
公開日2007-10-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.39 Å)
主引用文献The Periplasmic Bacterial Molecular Chaperone SurA Adapts its Structure to Bind Peptides in Different Conformations to Assert a Sequence Preference for Aromatic Residues.
J.Mol.Biol., 373, 2007
2PVM
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BU of 2pvm by Molmil
Structure-Based Design of Pyrazolo[1,5-a][1,3,5]triazine Derivatives as Potent Inhibitors of Protein Kinase CK2
分子名称: 4-(2-(1H-IMIDAZOL-4-YL)ETHYLAMINO)-2-(PHENYLAMINO)PYRAZOLO[1,5-A][1,3,5]TRIAZINE-8-CARBONITRILE, Casein kinase II subunit alpha
著者Nie, Z, Perretta, C, Erickson, P, Margosiak, S, Almassy, R, Lu, J, Averill, A, Yager, K.M, Chu, S.
登録日2007-05-09
公開日2008-05-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based design, synthesis, and study of pyrazolo[1,5-a][1,3,5]triazine derivatives as potent inhibitors of protein kinase CK2.
Bioorg.Med.Chem.Lett., 17, 2007
3R6Q
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BU of 3r6q by Molmil
A triclinic-lattice structure of aspartase from Bacillus sp. YM55-1
分子名称: Aspartase, CALCIUM ION
著者Fibriansah, G, Puthan Veetil, V, Poelarends, G.J, Thunnissen, A.-M.W.H.
登録日2011-03-22
公開日2011-07-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the catalytic mechanism of aspartate ammonia lyase.
Biochemistry, 50, 2011
3GAJ
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BU of 3gaj by Molmil
Structure of a C-terminal deletion variant of a PduO-type ATP:corrinoid adenosyltransferase from Lactobacillus reuteri complexed with cobalamin and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, COBALAMIN, Cobalamin adenosyltransferase PduO-like protein, ...
著者St Maurice, M, Mera, P.E, Escalante-Semerena, J.C, Rayment, I.
登録日2009-02-17
公開日2009-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Residue Phe112 of the human-type corrinoid adenosyltransferase (PduO) enzyme of Lactobacillus reuteri is critical to the formation of the four-coordinate Co(II) corrinoid substrate and to the activity of the enzyme.
Biochemistry, 48, 2009
3R11
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Crystal structure of NYSGRC enolase target 200555, a putative dipeptide epimerase from Francisella philomiragia : Mg and Fumarate complex
分子名称: Enzyme of enolase superfamily, FUMARIC ACID, GLYCEROL, ...
著者Vetting, M.W, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-03-09
公開日2011-04-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3GI5
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BU of 3gi5 by Molmil
Crystal structure of protease inhibitor, KB62 in complex with wild type HIV-1 protease
分子名称: (5S)-3-(3-Acetylphenyl)-N-[(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-methylpropyl)amino]-2-hydroxy-1-(phenylmethyl)pr opyl]-2-oxo-5-oxazolidinecarboxamide, PHOSPHATE ION, Protease
著者Nalam, M.N.L, Schiffer, C.A.
登録日2009-03-05
公開日2010-03-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Evaluating the substrate-envelope hypothesis: structural analysis of novel HIV-1 protease inhibitors designed to be robust against drug resistance.
J.Virol., 84, 2010
3GIM
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BU of 3gim by Molmil
Dpo4 extension ternary complex with oxoG(anti)-G(syn) pair
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DDG))-3', ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-03-05
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.
Structure, 17, 2009
3GB3
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BU of 3gb3 by Molmil
X-ray structure of genetically encoded photosensitizer KillerRed in native form
分子名称: KillerRed, SULFATE ION
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2009-02-18
公開日2009-09-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
2PVG
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BU of 2pvg by Molmil
Crystal srtucture of the binary complex between ferredoxin and ferredoxin:thioredoxin reductase
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin-1, Ferredoxin-thioredoxin reductase, ...
著者Dai, S.
登録日2007-05-09
公開日2007-07-10
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural snapshots along the reaction pathway of ferredoxin-thioredoxin reductase.
Nature, 448, 2007
3R2E
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BU of 3r2e by Molmil
Dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase from Yersinia pestis.
分子名称: Dihydroneopterin aldolase
著者Osipiuk, J, Maltseva, N, Makowska-Grzyska, M, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-14
公開日2011-03-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase from Yersinia pestis
To be Published
2PVO
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BU of 2pvo by Molmil
Crystal srtucture of the ternary complex between thioredoxin f, ferredoxin, and ferredoxin: thioredoxin reductase
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin-1, Ferredoxin-thioredoxin reductase, ...
著者Dai, S.
登録日2007-05-09
公開日2007-07-10
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural snapshots along the reaction pathway of ferredoxin-thioredoxin reductase.
Nature, 448, 2007
3FYJ
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BU of 3fyj by Molmil
Crystal structure of an optimzied benzothiophene inhibitor bound to MAPKAP Kinase-2 (MK-2)
分子名称: (10R)-10-methyl-3-(6-methylpyridin-3-yl)-9,10,11,12-tetrahydro-8H-[1,4]diazepino[5',6':4,5]thieno[3,2-f]quinolin-8-one, MAP kinase-activated protein kinase 2
著者Kurumbail, R.G, Caspers, N.
登録日2009-01-22
公開日2009-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Benzothiophene inhibitors of MK2. Part 2: improvements in kinase selectivity and cell potency.
Bioorg.Med.Chem.Lett., 19, 2009
3GDV
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Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YQF peptide
分子名称: DegS protease, YQF peptide
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2009-02-24
公開日2009-03-31
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.489 Å)
主引用文献OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism.
Structure, 17, 2009
3G19
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The structure of the Caulobacter crescentus clpS protease adaptor protein in complex with LLL tripeptide
分子名称: ATP-dependent Clp protease adapter protein clpS, LLL tripeptide
著者Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
登録日2009-01-29
公開日2009-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
2PZD
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BU of 2pzd by Molmil
Crystal Structure of the HtrA2/Omi PDZ Domain Bound to a Phage-Derived Ligand (WTMFWV)
分子名称: 1,2-ETHANEDIOL, Serine protease HTRA2
著者Appleton, B.A, Wiesmann, C.
登録日2007-05-17
公開日2007-08-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural and functional analysis of the ligand specificity of the HtrA2/Omi PDZ domain.
Protein Sci., 16, 2007
2Q35
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Crystal Structure of the Y82F variant of ECH2 decarboxylase domain of CurF from Lyngbya majuscula
分子名称: CHLORIDE ION, CurF, GLYCEROL
著者Geders, T.W, Mowers, J.C, Smith, J.L.
登録日2007-05-29
公開日2007-10-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the ECH2 catalytic domain of CurF from Lyngbya majuscula. Insights into a decarboxylase involved in polyketide chain beta-branching.
J.Biol.Chem., 282, 2007
3RGV
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BU of 3rgv by Molmil
A single TCR bound to MHCI and MHC II reveals switchable TCR conformers
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-B alpha chain, ...
著者Dai, S, Huseby, E, Scott-Browne, J, Rubtsova, K, Pinilla, C, Crawford, F, Marrack, P, Yin, L, Kappler, J.W.
登録日2011-04-09
公開日2011-07-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Single T Cell Receptor Bound to Major Histocompatibility Complex Class I and Class II Glycoproteins Reveals Switchable TCR Conformers.
Immunity, 35, 2011
2Q0A
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Structure and rearrangements in the carboxy-terminal region of SpIH channels
分子名称: CYCLIC GUANOSINE MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
著者Flynn, G.E, Black, K.D, Islas, L.D, Sankaran, B, Zagotta, W.N.
登録日2007-05-21
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and rearrangements in the carboxy-terminal region of SpIH channels.
Structure, 15, 2007
2Q0J
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Structure of Pseudomonas Quinolone Signal Response Protein PqsE
分子名称: BENZOIC ACID, FE (III) ION, Quinolone signal response protein
著者Yu, S, Jensen, V, Feldmann, I, Haussler, S, Blankenfeldt, W.
登録日2007-05-22
公開日2008-06-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
3VSD
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Crystal Structure of the K127A Mutant of O-Phosphoserine Sulfhydrylase Complexed with External Schiff Base of Pyridoxal 5'-Phosphate with O-Acetyl-L-Serine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, O-ACETYLSERINE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Nakamura, T, Kawai, Y, Kataoka, M, Ishikawa, K.
登録日2012-04-24
公開日2012-05-16
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural analysis of the substrate recognition mechanism in O-phosphoserine sulfhydrylase from the hyperthermophilic archaeon Aeropyrum pernix K1
J.Mol.Biol., 422, 2012
3TKQ
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Crystal structure of full-length human peroxiredoxin 4 with mixed conformation
分子名称: Peroxiredoxin-4
著者Wang, X, Wang, L, Wang, X, Sun, F, Wang, C.-C.
登録日2011-08-28
公開日2011-10-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural insights into the peroxidase activity and inactivation of human peroxiredoxin 4
Biochem.J., 2011

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