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3SNO
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BU of 3sno by Molmil
Crystal structure of a putative aminotransferase (NCgl2491) from Corynebacterium glutamicum ATCC 13032 at 1.60 A resolution
分子名称: 1,2-ETHANEDIOL, Hypothetical aminotransferase
著者Joint Center for Structural Genomics (JCSG)
登録日2011-06-29
公開日2011-07-20
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a Hypothetical aminotransferase (NCgl2491) from CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO at 1.60 A resolution
To be published
5AKS
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BU of 5aks by Molmil
Transthyretin binding heterogeneity and anti-amyloidogenic activity of natural polyphenols and their metabolites: resveratrol-3-O- glucuronide
分子名称: DIMETHYL SULFOXIDE, Resveratrol-3-O-glucuronide, SULFATE ION, ...
著者Florio, P, Foll, C, Cianci, M, Del Rio, D, Zanotti, G, Berni, R.
登録日2015-03-05
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Transthyretin Binding Heterogeneity and Anti-Amyloidogenic Activity of Natural Polyphenols and Their Metabolites
J.Biol.Chem., 290, 2015
5AL8
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BU of 5al8 by Molmil
Transthyretin binding heterogeneity and anti-amyloidogenic activity of natural polyphenols and their metabolites: daidzein-7-O- glucuronide
分子名称: DAIDZEIN-7-O-GLUCURONIDE, TRANSTHYRETIN
著者Florio, P, Foll, C, Cianci, M, Del Rio, D, Zanotti, G, Berni, R.
登録日2015-03-06
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Transthyretin Binding Heterogeneity and Anti-Amyloidogenic Activity of Natural Polyphenols and Their Metabolites
J.Biol.Chem., 290, 2015
5AKV
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BU of 5akv by Molmil
Transthyretin binding heterogeneity and anti-amyloidogenic activity of natural polyphenols and their metabolites: genistein-7-O- glucuronide
分子名称: Genistein-7-O-glucuronide, TRANSTHYRETIN
著者Florio, P, Foll, C, Cianci, M, Del Rio, D, Zanotti, G, Berni, R.
登録日2015-03-05
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Transthyretin Binding Heterogeneity and Anti-Amyloidogenic Activity of Natural Polyphenols and Their Metabolites
J.Biol.Chem., 290, 2015
5AKT
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BU of 5akt by Molmil
Transthyretin binding heterogeneity and anti-amyloidogenic activity of natural polyphenols and their metabolites: resveratrol-4'-O- glucuronide
分子名称: Resveratrol-4'-O-glucuronide, SULFATE ION, TRANSTHYRETIN
著者Florio, P, Folli, C, Cianci, M, Del Rio, D, Zanotti, G, Berni, R.
登録日2015-03-05
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Transthyretin Binding Heterogeneity and Anti-Amyloidogenic Activity of Natural Polyphenols and Their Metabolites
J.Biol.Chem., 290, 2015
5AL0
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BU of 5al0 by Molmil
Transthyretin binding heterogeneity and anti-amyloidogenic activity of natural polyphenols and their metabolites: resveratrol-3-O-sulfate
分子名称: DIMETHYL SULFOXIDE, RESVERATROL-3-O-SULFATE, SULFATE ION, ...
著者Florio, P, Foll, C, Cianci, M, Del Rio, D, Zanotti, G, Berni, R.
登録日2015-03-05
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.388 Å)
主引用文献Transthyretin Binding Heterogeneity and Anti-Amyloidogenic Activity of Natural Polyphenols and Their Metabolites
J.Biol.Chem., 290, 2015
2W2M
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BU of 2w2m by Molmil
WT PCSK9-DELTAC BOUND TO WT EGF-A OF LDLR
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
著者Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
登録日2008-11-03
公開日2008-11-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
2W2N
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BU of 2w2n by Molmil
WT PCSK9-deltaC bound to EGF-A H306Y mutant of LDLR
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
著者Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
登録日2008-11-03
公開日2008-11-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
3DJS
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BU of 3djs by Molmil
Crystal structure of transthyretin variant L58H at acidic pH
分子名称: Transthyretin
著者Cendron, L, Zanotti, G, Folli, C, Berni, R.
登録日2008-06-24
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Amyloidogenic potential of transthyretin variants: insights from structural and computational analyses.
J.Biol.Chem., 284, 2009
3DJZ
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BU of 3djz by Molmil
Crystal structure of transthyretin variant L55P at neutral pH
分子名称: Transthyretin
著者Cendron, L, Zanotti, G, Folli, C, Berni, R.
登録日2008-06-24
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Amyloidogenic potential of transthyretin variants: insights from structural and computational analyses.
J.Biol.Chem., 284, 2009
2W2O
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BU of 2w2o by Molmil
PCSK9-deltaC D374Y mutant bound to WT EGF-A of LDLR
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
著者Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
登録日2008-11-03
公開日2008-11-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
2W2Q
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BU of 2w2q by Molmil
PCSK9-deltaC D374H mutant bound to WT EGF-A of LDLR
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
著者Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
登録日2008-11-03
公開日2008-11-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
2W2P
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BU of 2w2p by Molmil
PCSK9-deltaC D374A mutant bound to WT EGF-A of LDLR
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
著者Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
登録日2008-11-03
公開日2008-11-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
6GW7
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BU of 6gw7 by Molmil
The CTD of HpDprA, a DNA binding Winged Helix domain which do not bind dsDNA
分子名称: DNA protecting protein DprA
著者Lisboa, J, Celma, L, Sanchez, D, Marquis, M, Andreani, J, Guerois, R, Ochsenbein, F, Durand, D, Marsin, S, Cuniasse, P, Radicella, J.P, Quevillon-Cheruel, S.
登録日2018-06-22
公開日2019-04-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The C-terminal domain of HpDprA is a DNA-binding winged helix domain that does not bind double-stranded DNA.
Febs J., 286, 2019
3GIP
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BU of 3gip by Molmil
Crystal structure of N-acyl-D-Glutamate Deacylase from Bordetella Bronchiseptica complexed with zinc, acetate and formate ions.
分子名称: ACETIC ACID, FORMIC ACID, N-acyl-D-glutamate deacylase, ...
著者Fedorov, A.A, Fedorov, E.V, Cummings, J, Raushel, F.M, Almo, S.C.
登録日2009-03-05
公開日2009-09-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Annotating enzymes of uncertain function: the deacylation of D-amino acids by members of the amidohydrolase superfamily.
Biochemistry, 48, 2009
3GIQ
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BU of 3giq by Molmil
Crystal structure of N-acyl-D-Glutamate Deacylase from Bordetella Bronchiseptica complexed with zinc and phosphonate inhibitor, a mimic of the reaction tetrahedral intermediate.
分子名称: N-[(R)-hydroxy(methyl)phosphoryl]-D-glutamic acid, N-acyl-D-glutamate deacylase, ZINC ION
著者Fedorov, A.A, Fedorov, E.V, Cummings, J, Raushel, F.M, Almo, S.C.
登録日2009-03-05
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Annotating enzymes of uncertain function: the deacylation of D-amino acids by members of the amidohydrolase superfamily.
Biochemistry, 48, 2009
4NJP
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BU of 4njp by Molmil
Proteolysis inside the membrane is a rate-governed reaction not Driven by substrate affinity
分子名称: Rhomboid protease GlpG
著者Dickey, S.W, Baker, R.P, Cho, S, Urban, S.
登録日2013-11-11
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Proteolysis inside the Membrane Is a Rate-Governed Reaction Not Driven by Substrate Affinity.
Cell(Cambridge,Mass.), 155, 2013
3OEZ
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BU of 3oez by Molmil
crystal structure of the L317I mutant of the chicken c-Src tyrosine kinase domain complexed with imatinib
分子名称: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, ACETATE ION, GLYCEROL, ...
著者Boubeva, R, Pernot, L, Perozzo, R, Scapozza, L.
登録日2010-08-13
公開日2011-08-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献a single amino-acid dictates the dynamics of the switch between active and inactive C-Src conformation
To be Published
4KZS
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BU of 4kzs by Molmil
Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori
分子名称: LPP20 lipofamily protein, PENTAETHYLENE GLYCOL
著者Quarantini, S, Cendron, L, Fischer, W, Zanotti, G.
登録日2013-05-30
公開日2014-06-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori.
Proteins, 82, 2014
3OF0
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BU of 3of0 by Molmil
crystal structure of the L317I mutant of the chicken c-Src tyrosine kinase domain
分子名称: Proto-oncogene tyrosine-protein kinase Src
著者Boubeva, R, Pernot, L, Perozzo, R, Scapozza, L.
登録日2010-08-13
公開日2011-08-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献a single amino-acid dictates the dynamics of the switch between active and inactive C-Src conformation
To be Published
5ZIN
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BU of 5zin by Molmil
Crystal structure of bacteriorhodopsin at 1.27 A resolution
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, RETINAL
著者Hasegawa, N, Jonotsuka, H, Miki, K, Takeda, K.
登録日2018-03-16
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8, 2018
5ZIL
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BU of 5zil by Molmil
Crystal structure of bacteriorhodopsin at 1.29 A resolution
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, RETINAL
著者Hasegawa, N, Jonotsuka, H, Miki, K, Takeda, K.
登録日2018-03-16
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8, 2018
5ZIM
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BU of 5zim by Molmil
Crystal structure of bacteriorhodopsin at 1.25 A resolution
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, RETINAL
著者Hasegawa, N, Jonotsuka, H, Miki, K, Takeda, K.
登録日2018-03-16
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8, 2018
7OCW
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BU of 7ocw by Molmil
Hepatitis B core protein -low secretion phenotype P5T
分子名称: Capsid protein
著者Bottcher, B, Makbul, C.
登録日2021-04-28
公開日2021-05-26
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype.
Microorganisms, 9, 2021
7OEV
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BU of 7oev by Molmil
Hepatitis B core protein mutant F97L with bound GSLLGRMKGA
分子名称: Capsid protein, GSLLGRMKGA
著者Makbul, C, Bottcher, B.
登録日2021-05-04
公開日2021-05-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype.
Microorganisms, 9, 2021

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