5ZIN

Crystal structure of bacteriorhodopsin at 1.27 A resolution

Summary for 5ZIN

DescriptorBacteriorhodopsin, RETINAL, 2,3-DI-PHYTANYL-GLYCEROL, ... (4 entities in total)
Functional Keywordsproton pump, membrane protein, proton transport
Biological sourceHalobacterium salinarum (Halobacterium halobium)
Total number of polymer chains1
Total molecular weight27220.33
Authors
Hasegawa, N.,Jonotsuka, H.,Miki, K.,Takeda, K. (deposition date: 2018-03-16, release date: 2018-10-10)
Primary citation
Hasegawa, N.,Jonotsuka, H.,Miki, K.,Takeda, K.
X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8:13123-13123, 2018
PubMed: 30177765 (PDB entries with the same primary citation)
DOI: 10.1038/s41598-018-31370-0
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.27 Å)
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.155110 4.9% 1.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5zin
no rotation
Molmil generated image of 5zin
rotated about x axis by 90°
Molmil generated image of 5zin
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 5zin
no rotation
Molmil generated image of 5zin
rotated about x axis by 90°
Molmil generated image of 5zin
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (5zin.pdb1.gz [241.65 KB])
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2018 Protein Data Bank Japan