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3ONB
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BU of 3onb by Molmil
Bond breakage and relocation of a covalently bound bromine of IDD594 in a complex with hAR T113A mutant after extensive radiation dose
分子名称: Aldose reductase, BROMIDE ION, CITRIC ACID, ...
著者Koch, C, Heine, A, Klebe, G.
登録日2010-08-28
公開日2011-08-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Radiation damage reveals promising interaction position
J.SYNCHROTRON RADIAT., 18, 2011
3CYF
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BU of 3cyf by Molmil
Crystal Structure of E18N DJ-1
分子名称: Protein DJ-1
著者Witt, A.C, Lakshminarasimhan, M, Remington, B.C, Hasim, S, Pozharski, E, Wilson, M.A.
登録日2008-04-25
公開日2008-07-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Cysteine pKa depression by a protonated glutamic acid in human DJ-1.
Biochemistry, 47, 2008
3CZ9
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BU of 3cz9 by Molmil
Crystal Structure of E18L DJ-1
分子名称: O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL, Protein DJ-1
著者Witt, A.C, Lakshminarasimhan, M, Remington, B.C, Hasim, S, Pozharski, E, Wilson, M.A.
登録日2008-04-28
公開日2008-07-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Cysteine pKa depression by a protonated glutamic acid in human DJ-1.
Biochemistry, 47, 2008
2Z29
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BU of 2z29 by Molmil
Thr109Ala dihydroorotase from E. coli
分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
3OV8
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BU of 3ov8 by Molmil
Crystal structure of AF1382 from Archaeoglobus fulgidus, High resolution
分子名称: ACETATE ION, CHLORIDE ION, Protein AF_1382
著者Zhu, J.-Y, Zhao, M, Fu, Z.-Q, Yang, H, Chang, J, Hao, X, Chen, L, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2010-09-16
公開日2011-11-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8501 Å)
主引用文献Structure of the Archaeoglobus fulgidus orphan ORF AF1382 determined by sulfur SAD from a moderately diffracting crystal.
Acta Crystallogr.,Sect.D, 68, 2012
3T95
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BU of 3t95 by Molmil
Crystal structure of LsrB from Yersinia pestis complexed with autoinducer-2
分子名称: (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran, Autoinducer 2-binding protein lsrB
著者Kavanaugh, J.S, Gakhar, L, Horswill, A.R.
登録日2011-08-02
公開日2011-12-07
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The structure of LsrB from Yersinia pestis complexed with autoinducer-2.
Acta Crystallogr.,Sect.F, 67, 2011
1Z30
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BU of 1z30 by Molmil
NMR structure of the apical part of stemloop D from cloverleaf 1 of bovine enterovirus 1 RNA
分子名称: 5'-R(*GP*GP*CP*GP*UP*UP*CP*GP*UP*UP*AP*GP*AP*AP*CP*GP*UP*C)-3'
著者Ihle, Y, Ohlenschlager, O, Duchardt, E, Ramachandran, R, Gorlach, M.
登録日2005-03-10
公開日2005-04-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A novel cGUUAg tetraloop structure with a conserved yYNMGg-type backbone conformation from cloverleaf 1 of bovine enterovirus 1 RNA
Nucleic Acids Res., 33, 2005
3B32
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BU of 3b32 by Molmil
Crystal Structure of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75
分子名称: CALCIUM ION, Calmodulin
著者Newman, R.A, Shea, M.A.
登録日2007-10-19
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Thermodynamics and conformational change governing domain-domain interactions of calmodulin.
Methods Enzymol., 466, 2009
2Z27
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BU of 2z27 by Molmil
Thr109Ser dihydroorotase from E. coli
分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
2Z2A
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BU of 2z2a by Molmil
Thr109Gly dihydroorotase from E. coli
分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
2RAR
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BU of 2rar by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
分子名称: MAGNESIUM ION, Putative uncharacterized protein, oxido(dioxo)vanadium
著者Lu, Z, Dunaway-Mariano, D, Allen, K.N.
登録日2007-09-17
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RAV
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BU of 2rav by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
分子名称: MAGNESIUM ION, Putative uncharacterized protein, trioxido(oxo)tungsten
著者Lu, Z, Dunaway-Mariano, D, Allen, K.N.
登録日2007-09-17
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RB5
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BU of 2rb5 by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
分子名称: MAGNESIUM ION, Putative uncharacterized protein, trioxido(oxo)tungsten
著者Lu, Z, Dunaway-Mariano, D, Allen, K.N.
登録日2007-09-18
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3UNX
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BU of 3unx by Molmil
Bond length analysis of asp, glu and his residues in subtilisin Carlsberg at 1.26A resolution
分子名称: CALCIUM ION, GLYCEROL, SODIUM ION, ...
著者Fisher, S.J, Helliwell, J.R, Blakeley, M.P, Cianci, M, McSweeny, S.
登録日2011-11-16
公開日2012-06-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Protonation-state determination in proteins using high-resolution X-ray crystallography: effects of resolution and completeness.
Acta Crystallogr.,Sect.D, 68, 2012
2RBK
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BU of 2rbk by Molmil
X-ray Crystallographic Structures Show Conservation of a Trigonal-Bipyramidal Intermediate in a Phosphoryl-transfer Superfamily.
分子名称: MAGNESIUM ION, Putative uncharacterized protein, oxido(dioxo)vanadium
著者Lu, Z, Dunaway-Mariano, D, Allen, K.N.
登録日2007-09-19
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2PRC
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BU of 2prc by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (UBIQUINONE-2 COMPLEX)
分子名称: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
著者Lancaster, C.R.D, Michel, H.
登録日1997-07-29
公開日1998-11-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The coupling of light-induced electron transfer and proton uptake as derived from crystal structures of reaction centres from Rhodopseudomonas viridis modified at the binding site of the secondary quinone, QB.
Structure, 5, 1997
2PZ0
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BU of 2pz0 by Molmil
Crystal structure of Glycerophosphodiester Phosphodiesterase (GDPD) from T. tengcongensis
分子名称: CALCIUM ION, GLYCEROL, Glycerophosphoryl diester phosphodiesterase
著者Shi, L, Liu, J.F, An, X.M, Liang, D.C.
登録日2007-05-17
公開日2008-04-01
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of glycerophosphodiester phosphodiesterase (GDPD) from Thermoanaerobacter tengcongensis, a metal ion-dependent enzyme: insight into the catalytic mechanism.
Proteins, 72, 2008
3QL3
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BU of 3ql3 by Molmil
Re-refined coordinates for PDB entry 1RX2
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
登録日2011-02-02
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A dynamic knockout reveals that conformational fluctuations influence the chemical step of enzyme catalysis.
Science, 332, 2011
2Z26
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BU of 2z26 by Molmil
Thr110Ala dihydroorotase from E. coli
分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, MALONATE ION, ...
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
2Z28
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BU of 2z28 by Molmil
Thr109Val dihydroorotase from E. coli
分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
2Z24
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BU of 2z24 by Molmil
Thr110Ser dihydroorotase from E. coli
分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
2Z2B
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BU of 2z2b by Molmil
Deletion 107-116 mutant of dihydroorotase from E. coli
分子名称: Dihydroorotase, ZINC ION
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
2Z25
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BU of 2z25 by Molmil
Thr110Val dihydroorotase from E. coli
分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
著者Lee, M, Maher, M.J, Guss, J.M.
登録日2007-05-17
公開日2007-10-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Kinetic and Structural Analysis of Mutant Escherichia coli Dihydroorotases: A Flexible Loop Stabilizes the Transition State
Biochemistry, 46, 2007
2OTC
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BU of 2otc by Molmil
ORNITHINE TRANSCARBAMOYLASE COMPLEXED WITH N-(PHOSPHONACETYL)-L-ORNITHINE
分子名称: N-(PHOSPHONOACETYL)-L-ORNITHINE, ORNITHINE CARBAMOYLTRANSFERASE
著者Ha, Y, Allewell, N.M.
登録日1997-06-15
公開日1998-06-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Substrate-induced conformational change in a trimeric ornithine transcarbamoylase.
Proc.Natl.Acad.Sci.USA, 94, 1997
3RU4
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BU of 3ru4 by Molmil
Crystal structure of the Bowman-Birk serine protease inhibitor BTCI in complex with trypsin and chymotrypsin
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, Bowman-Birk type seed trypsin and chymotrypsin inhibitor, ...
著者Esteves, G.F, Santos, C.R, Ventura, M.M, Barbosa, J.A.R.G, Freitas, S.M.
登録日2011-05-04
公開日2012-08-29
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal structure of the Bowman-Birk serine protease inhibitor BTCI in complex with trypsin and chymotrypsin
To be Published

238582

件を2025-07-09に公開中

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