PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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6Q9B	CI Membrane Arm focused refinement from Ovine respiratory SC I+III2 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Acyl carrier protein, ... 著者 Letts, J.A, Sazanov, L.A. 登録日 2018-12-17 公開日 2019-08-21 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk. Mol.Cell, 75, 2019
8DBS	E. coli ATP synthase imaged in 10mM MgATP State2 "half-up" Fo classified 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
6QAJ	Structure of the tripartite motif of KAP1/TRIM28 分子名称: Endolysin,Transcription intermediary factor 1-beta, ZINC ION 著者 Stoll, G.A, Oda, S, Yu, M, Modis, Y. 登録日 2018-12-19 公開日 2019-07-24 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.901 Å) 主引用文献 Structure of KAP1 tripartite motif identifies molecular interfaces required for retroelement silencing. Proc.Natl.Acad.Sci.USA, 116, 2019
6QC7	Ovine respiratory complex I FRC open class 3 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Acyl carrier protein, ... 著者 Letts, J.A, Sazanov, L.A. 登録日 2018-12-27 公開日 2019-08-21 最終更新日 2019-10-02 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk. Mol.Cell, 75, 2019
8DBQ	E. coli ATP synthase imaged in 10mM MgATP State1 "half-up" Fo classified 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8IP8	Wheat 80S ribosome stalled on AUG-Stop boron dependently 分子名称: 18S ribosomal RNA, 40S ribosomal protein eL8, 40S ribosomal protein eS1, ... 著者 Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T. 登録日 2023-03-14 公開日 2024-02-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1. Nat.Chem.Biol., 20, 2024
6Q1S	A hypothetical aminotransferase from Mycobacterium tuberculosis, alpha-ketoglutarate and PMP bound form 分子名称: 2-OXOGLUTARIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, CITRIC ACID, ... 著者 Duan, L, Sacchettini, J. 登録日 2019-08-05 公開日 2020-09-23 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A hypothetical aminotransferase from Mycobacterium tuberculosis To Be Published
8IFC	Arbekacin-bound E.coli 70S ribosome in the PURE system 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T. 登録日 2023-02-17 公開日 2024-02-14 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside. J.Biochem., 175, 2024
8IFE	Arbekacin-added human 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T. 登録日 2023-02-17 公開日 2024-02-14 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.57 Å) 主引用文献 Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside. J.Biochem., 175, 2024
8IFB	Dibekacin-bound E.coli 70S ribosome in the PURE system 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T. 登録日 2023-02-17 公開日 2024-02-14 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.43 Å) 主引用文献 Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside. J.Biochem., 175, 2024
8JDM	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. 登録日 2023-05-14 公開日 2023-12-06 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.67 Å) 主引用文献 Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8CWO	Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map 分子名称: 16S ribosomal RNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Lomakin, I.B, Devarkar, S.C, Bunick, C.G. 登録日 2022-05-19 公開日 2023-03-15 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 Sarecycline inhibits protein translation in Cutibacterium acnes 70S ribosome using a two-site mechanism. Nucleic Acids Res., 51, 2023
8JDL	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. 登録日 2023-05-14 公開日 2023-12-06 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.42 Å) 主引用文献 Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8CRX	Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Lomakin, I.B, Devarkar, S.C, Bunick, C.G. 登録日 2022-05-12 公開日 2023-03-22 最終更新日 2023-04-19 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 Sarecycline inhibits protein translation in Cutibacterium acnes 70S ribosome using a two-site mechanism. Nucleic Acids Res., 51, 2023
6OKK	Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Wong, W, Scheres, S.H.W. 登録日 2019-04-13 公開日 2019-05-22 最終更新日 2020-01-08 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. Elife, 3, 2014
6OW3	X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -1T 分子名称: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*GP*AP*TP*CP*TP*GP*AP*TP*GP*C)-3'), DNA (5'-D(P*GP*CP*AP*TP*CP*AP*GP*AP*GP*CP*CP*CP*TP*AP*AP*A)-3'), DNA-directed RNA polymerase subunit alpha, ... 著者 Shin, Y, Murakami, K.S. 登録日 2019-05-09 公開日 2019-07-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.766 Å) 主引用文献 Structural basis of reiterative transcription from the pyrG and pyrBI promoters by bacterial RNA polymerase. Nucleic Acids Res., 48, 2020
6OY6	X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 5 min 分子名称: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*GP*AP*TP*CP*TP*GP*AP*TP*GP*CP*AP*GP*G)-3'), DNA (5'-D(P*CP*CP*TP*GP*CP*AP*TP*CP*AP*GP*AP*GP*CP*CP*CP*AP*AP*AP*A)-3'), DNA-directed RNA polymerase subunit alpha, ... 著者 Shin, Y, Murakami, K.S. 登録日 2019-05-14 公開日 2019-06-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.096 Å) 主引用文献 Structural basis of reiterative transcription from the pyrG and pyrBI promoters by bacterial RNA polymerase. Nucleic Acids Res., 48, 2020
6QBX	Ovine respiratory supercomplex I+III2 closed class. 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Acyl carrier protein, ... 著者 Letts, J.A, Sazanov, L.A. 登録日 2018-12-24 公開日 2019-08-21 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk. Mol.Cell, 75, 2019
8I9Z	Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4 分子名称: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ... 著者 Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J. 登録日 2023-02-07 公開日 2023-05-17 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. Embo Rep., 24, 2023
8I9X	Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1 分子名称: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ... 著者 Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J. 登録日 2023-02-07 公開日 2023-05-17 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. Embo Rep., 24, 2023
8IA0	Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6 分子名称: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ... 著者 Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J. 登録日 2023-02-07 公開日 2023-05-17 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. Embo Rep., 24, 2023
8I9R	Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP 分子名称: 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, 60S ribosomal protein L16-like protein, ... 著者 Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J. 登録日 2023-02-07 公開日 2023-05-17 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. Embo Rep., 24, 2023
8I9V	Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2 分子名称: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ... 著者 Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J. 登録日 2023-02-07 公開日 2023-05-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. Embo Rep., 24, 2023
8I9W	Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3 分子名称: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ... 著者 Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J. 登録日 2023-02-07 公開日 2023-05-17 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. Embo Rep., 24, 2023
8I9Y	Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2 分子名称: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ... 著者 Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J. 登録日 2023-02-07 公開日 2023-05-17 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. Embo Rep., 24, 2023

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