PDB: 31311 件ウェブページステータス検索Chemie searchBIRD

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5GGL	Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GlcNAc-alpha-pNP 分子名称: 4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside, Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 著者 Kuwabara, N, Senda, T, Kato, R. 登録日 2016-06-16 公開日 2016-08-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan Proc.Natl.Acad.Sci.USA, 113, 2016
5GGP	Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GlcNAc-beta1,2-Man-peptide 分子名称: 10-mer Peptide from Dystroglycan, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1, ... 著者 Kuwabara, N, Senda, T, Kato, R. 登録日 2016-06-16 公開日 2016-08-10 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.599 Å) 主引用文献 Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan Proc.Natl.Acad.Sci.USA, 113, 2016
8QDI	compound 1b bound KMT9 crystal structure 分子名称: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[2-[(2~{R})-pyrrolidin-2-yl]ethyl]amino]-2-azanyl-butanoic acid, Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein 著者 Sheng, W, Eric, M, Roland, S. 登録日 2023-08-29 公開日 2024-09-11 実験手法 X-RAY DIFFRACTION (1.467 Å) 主引用文献 compound 1a bound KMT9 crystal structure To Be Published
7UK6	Apo form of YjfC from Escherichia coli K-12 分子名称: Putative acid--amine ligase YjfC, SULFATE ION 著者 Pederick, J.L, Bruning, J.B. 登録日 2022-03-31 公開日 2023-02-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity. Biochemistry, 62, 2023
8U1A	De novo Design of Near Infrared Fluorescent Proteins 分子名称: Designed Near Infrared Fluorescent Protein MC7BP34 著者 Liu, Y, Xu, C, Bera, A.K, Kang, A, Baker, D. 登録日 2023-08-31 公開日 2024-09-11 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 De novo Design of Near Infrared Fluorescent Proteins To Be Published
8JRC	Crystal structure of the GAF domain of the transcriptional activator NifA 分子名称: Nif-specific regulatory protein 著者 Zeng, Y, Guo, L, Li, D.F. 登録日 2023-06-16 公開日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the GAF domain of the transcriptional activator NifA To Be Published
7UK8	Apo form of YgiC from Escherichia coli K-12 分子名称: MAGNESIUM ION, NICKEL (II) ION, Putative acid--amine ligase YgiC, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2022-03-31 公開日 2023-02-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity. Biochemistry, 62, 2023
7OL7	Crystal structure of Lysozyme in complex with trifluoroethanol: tetragonal form 分子名称: CHLORIDE ION, Lysozyme, SODIUM ION, ... 著者 Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M. 登録日 2021-05-19 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Crystal structure of Lysozyme in complex with TFE To be published
5BYT	PRPP complexed with a single Mg in the active site of Mycobacterium tuberculosis anthranilate phosphoribosyltransferase (AnPRT; trpD) 分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Anthranilate phosphoribosyltransferase, MAGNESIUM ION 著者 Evans, G.L, Baker, E.N, Lott, J.S, TB Structural Genomics Consortium (TBSGC) 登録日 2015-06-11 公開日 2016-07-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Binding and mimicking of the phosphate-rich substrate, PRPP. To be Published
8TX9	Nan Regulatory Protein (core isomerase domain) from Streptococcus pneumoniae 分子名称: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, MurR/RpiR family transcriptional regulator, SODIUM ION 著者 Wood, D.M, Horne, C.R, Panjikar, S, Dobson, R.C.J. 登録日 2023-08-23 公開日 2024-09-11 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Structure of isomerase domain of the nan-regulatory protein (NanR) from Streptococcus pneumoniae To Be Published
5TZQ	Crystal Structure of FPV039:Bmf BH3 complex 分子名称: 1,2-ETHANEDIOL, Bcl-2-like protein FPV039, Bcl-2-modifying factor 著者 Anasir, M.I, Kvansakul, M. 登録日 2016-11-22 公開日 2017-05-03 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural basis of apoptosis inhibition by the fowlpox virus protein FPV039. J. Biol. Chem., 292, 2017
8JT4	Substrate -binding mode guided protein design of alginate lyase FlAlyA for altered end-product distribution 分子名称: Alginate lyase 著者 Zhang, X, Yang, D.F. 登録日 2023-06-21 公開日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Substrate -binding mode guided protein design of alginate lyase FlAlyA for altered end-product distribution To Be Published
7OL8	Crystal structure of Lysozyme in complex with trifluoroethanol: orthorhombic form 分子名称: CHLORIDE ION, Lysozyme, SULFATE ION, ... 著者 Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M. 登録日 2021-05-19 公開日 2022-06-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Crystal structure of Lysozyme in complex with TFE To be published
7Y4H	AcvX from Actinomadura viridis that exhibits deglycosylation activity on lobophorins 分子名称: AcvX 著者 Tan, B, Zhang, L.P, Zhang, C.S. 登録日 2022-06-14 公開日 2023-05-24 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A Widespread Glycosidase Confers Lobophorin Resistance and Host-Dependent Structural Diversity. Angew.Chem.Int.Ed.Engl., 62, 2023
6LTD	Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-alpha-methyl-L-serine-AMP bound form 分子名称: ADENOSINE MONOPHOSPHATE, Nonribosomal peptide synthetase, alpha-methyl-L-serine 著者 Senda, T, Harada, A. 登録日 2020-01-22 公開日 2021-03-10 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (4.1 Å) 主引用文献 Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation. Angew.Chem.Int.Ed.Engl., 60, 2021
7UVA	Crystal structure of KDM2A histone demethylase catalytic domain in complex with an H3C36 peptide modified by UNC8015 分子名称: FE (III) ION, Histone H3.2, Lysine-specific demethylase 2A, ... 著者 Budziszewski, G.R, Azzam, D.N, Spangler, C.J, Skrajna, A, Foley, C.A, James, L.I, Frye, S.V, McGinty, R.K. 登録日 2022-04-29 公開日 2023-02-22 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Structural basis of paralog-specific KDM2A/B nucleosome recognition. Nat.Chem.Biol., 19, 2023
7OL6	Crystal structure of Lysozyme in complex with Imidazole 分子名称: CHLORIDE ION, IMIDAZOLE, Lysozyme, ... 著者 Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M. 登録日 2021-05-19 公開日 2022-06-01 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Crystal structure of Lysozyme in complex with Imidazole To be published
7UI4	Crystal structure of the DNA preQ0 insertase DpdA 分子名称: DNA-guanine transglycosylase, ZINC ION 著者 Hung, S.-H, Swairjo, M.A. 登録日 2022-03-28 公開日 2023-02-22 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system. Nucleic Acids Res., 51, 2023
5U6F	Bacterial adhesin from Mobiluncus mulieris containing intramolecular disulfide, isopeptide, and ester bond cross-links (space group P21) 分子名称: LPXTG-motif cell wall anchor domain protein 著者 Paynter, J, Young, P.G, Squire, C.J. 登録日 2016-12-07 公開日 2018-06-13 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Domain structure and cross-linking in a giant adhesin from the Mobiluncus mulieris bacterium. Acta Crystallogr D Struct Biol, 79, 2023
8U2L	Crystal structure of KAI2 S95C L48I mutant 分子名称: GLYCEROL, KARRIKIN INSENSITIVE 2, SULFATE ION 著者 Davies, S.F, Waters, M.T, Bond, C.S. 登録日 2023-09-06 公開日 2024-09-18 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Crystal structure of KAI2 S95C L48I mutant To Be Published
8QDG	compound 1a bound KMT9 crystal structure 分子名称: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[(3~{S})-pyrrolidin-3-yl]amino]-2-azanyl-butanoic acid, Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein 著者 Sheng, W, Eric, M, Roland, S. 登録日 2023-08-29 公開日 2024-09-11 実験手法 X-RAY DIFFRACTION (1.392 Å) 主引用文献 compound 1a bound KMT9 crystal structure To Be Published
8U33	Crystal structure of KAI2 S95C mutant 分子名称: DIMETHYL SULFOXIDE, GLYCEROL, Probable esterase KAI2, ... 著者 Davies, S.F, Waters, M.T, Bond, C.S. 登録日 2023-09-07 公開日 2024-09-18 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Crystal structure of KAI2 S95C mutant To Be Published
7YD9	Crystal structure of the P450 BM3 heme domain mutant F87G/T268V/A184V/A328V in complex with N-imidazolyl-hexanoyl-L-phenylalanine,methylbenzene and hydroxylamine 分子名称: (2S)-2-(6-imidazol-1-ylhexanoylamino)-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ... 著者 Dong, S, Chen, J, Jiang, Y, Cong, Z, Feng, Y. 登録日 2022-07-04 公開日 2023-05-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.748 Å) 主引用文献 Regiodivergent and Enantioselective Hydroxylation of C-H bonds by Synergistic Use of Protein Engineering and Exogenous Dual-Functional Small Molecules. Angew.Chem.Int.Ed.Engl., 62, 2023
7OMO	Crystal structure of coelenteramine-bound Renilla reniformis luciferase RLuc8-D120A variant 分子名称: 4-[5-azanyl-6-(phenylmethyl)pyrazin-2-yl]phenol, CHLORIDE ION, GLYCEROL, ... 著者 Schenkmayerova, A, Marek, M. 登録日 2021-05-24 公開日 2022-06-01 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.451 Å) 主引用文献 Catalytic mechanism for Renilla-type luciferases Nat Catal, 2023
5GHF	Transaminase with L-ala 分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase class-III 著者 Kim, J, Park, J. 登録日 2016-06-19 公開日 2017-05-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Active Site Engineering of omega-Transaminase Guided by Docking Orientation Analysis and Virtual Activity Screening Acs Catalysis, 7, 2017

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