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6JMY
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Structure of wild type closed form of peptidoglycan peptidase
分子名称: CITRIC ACID, Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.661 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN2
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Crystal structure of the coiled-coil domains of human DOT1L in complex with AF10
分子名称: Histone-lysine N-methyltransferase, H3 lysine-79 specific, Protein AF-10
著者Song, X, Wang, M, Yang, N, Xu, R.M.
登録日2019-03-13
公開日2019-09-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献A higher-order configuration of the heterodimeric DOT1L-AF10 coiled-coil domains potentiates their leukemogenenic activity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6JP1
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An X-ray structure of met sperm whale F43Y/T67R myoglobin with Tyr-heme double cross-links
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.W, Yuan, H.
登録日2019-03-25
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Unique Tyr-heme double cross-links in F43Y/T67R myoglobin: an artificial enzyme with a peroxidase activity comparable to that of native peroxidases.
Chem.Commun.(Camb.), 55, 2019
6JN6
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Metallo-Beta-Lactamase VIM-2 in complex with Dual MBL/SBL Inhibitor MS19
分子名称: Beta-lactamase class B VIM-2, FORMIC ACID, ZINC ION, ...
著者Li, G.-B, Liu, S.
登録日2019-03-13
公開日2019-07-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Structure-Based Development of (1-(3'-Mercaptopropanamido)methyl)boronic Acid Derived Broad-Spectrum, Dual-Action Inhibitors of Metallo- and Serine-beta-lactamases.
J.Med.Chem., 62, 2019
6JNN
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REF6 ZnF2-4-NAC004-mC1 complex
分子名称: DNA (5'-D(*CP*AP*AP*AP*AP*CP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*(5CM)P*TP*CP*TP*GP*TP*TP*TP*TP*G)-3'), Lysine-specific demethylase REF6, ...
著者Yao, Q.Q, Wu, B.X, Ma, J.B.
登録日2019-03-17
公開日2019-03-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献DNA methylation repels targeting of Arabidopsis REF6.
Nat Commun, 10, 2019
6JPA
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Rabbit Cav1.1-Verapamil Complex
分子名称: (2S)-2-(3,4-dimethoxyphenyl)-5-{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino}-2-(propan-2-yl)pentanenitrile, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
著者Zhao, Y, Huang, G, Wu, J, Yan, N.
登録日2019-03-26
公開日2019-06-12
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Molecular Basis for Ligand Modulation of a Mammalian Voltage-Gated Ca2+Channel.
Cell, 177, 2019
6JNU
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Catalase structure determined by eEFD (dataset 2)
分子名称: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者Yonekura, K, Maki-Yonekura, S.
登録日2019-03-18
公開日2019-04-24
最終更新日2024-03-27
実験手法ELECTRON CRYSTALLOGRAPHY (3.001 Å)
主引用文献A new cryo-EM system for electron 3D crystallography by eEFD.
J.Struct.Biol., 206, 2019
6JP4
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Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Alginate lyase, ...
著者Ji, S.Q, Dix, S.R, Aziz, A, Sedelnikova, S.E, Li, F.L, Rice, D.W.
登録日2019-03-25
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.069 Å)
主引用文献The molecular basis of endolytic activity of a multidomain alginate lyase fromDefluviitalea phaphyphila, a representative of a new lyase family, PL39.
J.Biol.Chem., 294, 2019
6JQM
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BU of 6jqm by Molmil
Structure of PaaZ with NADPH
分子名称: Bifunctional protein PaaZ, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G.
登録日2019-03-31
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.
Nat Commun, 10, 2019
6JQ3
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BU of 6jq3 by Molmil
Crystal Structure of H2-Kb in complex with a DPAGT1 mutant peptide
分子名称: Beta-2-microglobulin, DPAGT1 mutant antigen SIIVFNLL, H-2 class I histocompatibility antigen, ...
著者Bai, P, Zhou, Q, Wei, P, Yin, L.
登録日2019-03-28
公開日2020-05-06
最終更新日2021-02-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Immune-based mutation classification enables neoantigen prioritization and immune feature discovery in cancer immunotherapy.
Oncoimmunology, 10, 2021
6JQH
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Crystal structure of MaDA
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, MaDA
著者Du, X.X, Lei, X.G.
登録日2019-03-31
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis.
Nat.Chem., 12, 2020
6JR2
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ZHD/H242A complex with aZOL
分子名称: (3S,7R,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one, GLYCEROL, POTASSIUM ION, ...
著者Hu, X.J.
登録日2019-04-02
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of ZHD complex
To Be Published
6JR8
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BU of 6jr8 by Molmil
Flavobacterium johnsoniae GH31 dextranase, FjDex31A, mutant D412A complexed with isomaltotriose
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Candidate alpha-glycosidase Glycoside hydrolase family 31, ...
著者Tonozuka, T.
登録日2019-04-02
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into polysaccharide recognition by Flavobacterium johnsoniae dextranase, a member of glycoside hydrolase family 31.
Febs J., 287, 2020
6JCE
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BU of 6jce by Molmil
NMR solution and X-ray crystal structures of a DNA containing both right-and left-handed parallel-stranded G-quadruplexes
分子名称: 29-mer DNA
著者Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2019-01-28
公開日2019-07-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
6JRL
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BU of 6jrl by Molmil
Crystal structure of Drosophila alpha methyldopa-resistant protein/3,4-dihydroxyphenylacetaldehyde synthase
分子名称: 3,4-dihydroxyphenylacetaldehyde synthase
著者Wei, S, Vavrick, C.J, Guan, H, Liao, C, Robinson, H, Liang, J, Wang, D, Han, Q, Li, J.
登録日2019-04-04
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for the bifunctional mechanism of Drosophila alpha methyldopa-resistant protein/3,4-dihydroxyphenylacetaldehyde synthase
To Be Published
6JSD
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BU of 6jsd by Molmil
Crystal structure of the domain-swapped dimer H434A variant of the C-terminal domain of HtaA from Corynebacterium glutamicum
分子名称: Hypothetical membrane protein, ISOPROPYL ALCOHOL
著者Muraki, N, Aono, S.
登録日2019-04-08
公開日2019-11-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.042 Å)
主引用文献Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6JR5
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BU of 6jr5 by Molmil
ZHD/H242A complex with bZOL
分子名称: (3S,7S,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one, GLYCEROL, Zearalenone hydrolase
著者Hu, X.J.
登録日2019-04-02
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structure of ZHD complex
To Be Published
6JR9
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BU of 6jr9 by Molmil
ZHD/W183F complex with ZEN
分子名称: (3S,11E)-14,16-dihydroxy-3-methyl-3,4,5,6,9,10-hexahydro-1H-2-benzoxacyclotetradecine-1,7(8H)-dione, GLYCEROL, POTASSIUM ION, ...
著者Hu, X.J.
登録日2019-04-03
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structure of ZHD complex
To Be Published
6JRF
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BU of 6jrf by Molmil
Crystal structure of ZmMoc1-Holliday junction Complex in the presence of Calcium
分子名称: CALCIUM ION, DNA (33-MER), Monokaryotic chloroplast 1, ...
著者Lin, Z, Lin, H, Zhang, D, Yuan, C.
登録日2019-04-03
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Structural basis of sequence-specific Holliday junction cleavage by MOC1.
Nat.Chem.Biol., 15, 2019
6JPD
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BU of 6jpd by Molmil
Mouse receptor-interacting protein kinase 3 (RIP3) amyloid structure by solid-state NMR
分子名称: Receptor-interacting serine/threonine-protein kinase 3
著者Wu, X.L, Hu, H, Zhang, J, Dong, X.Q, Wang, J, Schwieters, C, Wang, H.Y, Lu, J.X.
登録日2019-03-26
公開日2020-10-28
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献The amyloid structure of mouse RIPK3 (receptor interacting protein kinase 3) in cell necroptosis.
Nat Commun, 12, 2021
6J3L
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BU of 6j3l by Molmil
Solution structure of the N-terminal extended protuberant domain of eukaryotic ribosomal stalk protein P0
分子名称: 60S acidic ribosomal protein P0
著者Choi, K.H.A, Lee, K.M, Yang, L, Wing-Heng Yu, C, Banfield, D.K, Ito, K, Uchiumi, T, Wong, K.B.
登録日2019-01-04
公開日2019-09-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and Mutagenesis Studies Evince the Role of the Extended Protuberant Domain of Ribosomal Protein uL10 in Protein Translation.
Biochemistry, 58, 2019
6JIC
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BU of 6jic by Molmil
Identification and Characterization of a carboxypeptidase inhibitor from Lycium barbarum
分子名称: WCI
著者Tan, W.L, Wong, K.H, Huang, J.Y, Tay, S.V, Wang, S.J.
登録日2019-02-20
公開日2020-02-26
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Identification and characterization of a wolfberry carboxypeptidase inhibitor from Lycium barbarum.
Food Chem, 351, 2021
6JSB
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Crystal structure of Heme binding protein HtaB from Corynebacterium glutamicum
分子名称: CALCIUM ION, Hypothetical membrane protein, PROTOPORPHYRIN IX CONTAINING FE
著者Muraki, N, Aono, S.
登録日2019-04-08
公開日2019-11-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Structural basis for the heme transfer reaction in heme uptake machinery from Corynebacteria.
Chem.Commun.(Camb.), 55, 2019
6J4I
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A conserved and buried edge-to-face aromatic interaction in SUMO is vital for the SUMO pathway
分子名称: Small ubiquitin-related modifier 1
著者Chatterjee, K.S, Das, R.
登録日2019-01-09
公開日2019-03-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A conserved and buried edge-to-face aromatic interaction in small ubiquitin-like modifier (SUMO) has a role in SUMO stability and function.
J.Biol.Chem., 294, 2019
6IYN
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Solution structure of camelid nanobody Nb26 against aflatoxin B1
分子名称: Nb26
著者Nie, Y, He, T, Zhu, J, Li, S.L, Hu, R, Yang, Y.H.
登録日2018-12-17
公開日2019-01-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Chemical shift assignments of a camelid nanobody against aflatoxin B1.
Biomol NMR Assign, 13, 2019

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件を2024-10-16に公開中

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